Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01777

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
1,902,857	+		CCNA_01776	0.73	-1.2
1,903,132	-				+0.2
1,903,244	-				-0.4
1,903,343	+				+0.3
1,903,374	-				-1.6
1,903,381	-				+1.5
1,903,421	+				+0.1
1,903,426	+				+1.0
1,903,517	+				+0.2
1,903,517	+				+0.2
1,903,525	-				-0.9
1,903,527	+				+0.3
1,903,535	-				-0.5
1,903,545	-				+0.8
1,903,594	+		CCNA_01777	0.11	+0.6
1,903,602	-		CCNA_01777	0.11	-0.8
1,903,602	-		CCNA_01777	0.11	-1.1
1,903,602	-		CCNA_01777	0.11	-1.3
1,903,608	+		CCNA_01777	0.11	+0.7
1,903,645	-		CCNA_01777	0.14	-0.6
1,903,759	+		CCNA_01777	0.20	+0.7
1,903,772	-		CCNA_01777	0.21	+0.5
1,903,774	+		CCNA_01777	0.21	+0.8
1,903,789	+		CCNA_01777	0.22	-0.6
1,903,811	+		CCNA_01777	0.23	+0.6
1,903,819	+		CCNA_01777	0.24	-0.7
1,903,933	+		CCNA_01777	0.31	+0.1
1,903,938	+		CCNA_01777	0.31	-0.3
1,903,953	-		CCNA_01777	0.32	-1.5
1,904,032	+		CCNA_01777	0.37	+0.2
1,904,059	-		CCNA_01777	0.38	-1.2
1,904,114	+		CCNA_01777	0.41	+0.6
1,904,122	-		CCNA_01777	0.42	-0.4
1,904,137	+		CCNA_01777	0.43	+0.5
1,904,165	-		CCNA_01777	0.44	+0.2
1,904,168	+		CCNA_01777	0.45	-1.1
1,904,178	+		CCNA_01777	0.45	+0.9
1,904,178	+		CCNA_01777	0.45	+0.5
1,904,192	-		CCNA_01777	0.46	-0.6
1,904,219	+		CCNA_01777	0.48	+0.4
1,904,277	+		CCNA_01777	0.51	-0.2
1,904,277	+		CCNA_01777	0.51	-0.0
1,904,280	-		CCNA_01777	0.51	+0.8
1,904,285	-		CCNA_01777	0.52	+1.0
1,904,290	+		CCNA_01777	0.52	+1.4
1,904,296	+		CCNA_01777	0.52	-0.0
1,904,299	-		CCNA_01777	0.52	+0.9
1,904,299	-		CCNA_01777	0.52	+0.1
1,904,299	-		CCNA_01777	0.52	-1.8
1,904,383	+		CCNA_01777	0.57	+0.2
1,904,391	-		CCNA_01777	0.58	-0.6
1,904,404	+		CCNA_01777	0.59	+0.4
1,904,485	-		CCNA_01777	0.63	+0.3
1,904,519	-		CCNA_01777	0.65	+0.3
1,904,527	-		CCNA_01777	0.66	+0.8
1,904,561	+		CCNA_01777	0.68	+0.3
1,904,566	+		CCNA_01777	0.68	+0.4
1,904,566	+		CCNA_01777	0.68	-0.1
1,904,566	+		CCNA_01777	0.68	+0.4
1,904,599	+		CCNA_01777	0.70	+0.5
1,904,669	-		CCNA_01777	0.74	-2.3
1,904,726	-		CCNA_01777	0.78	-0.6
1,904,737	+		CCNA_01777	0.78	+0.1
1,904,747	-		CCNA_01777	0.79	-0.3
1,904,755	-		CCNA_01777	0.80	-0.6
1,904,801	+		CCNA_01777	0.82	+0.4
1,904,814	+		CCNA_01777	0.83	-0.8
1,904,814	+		CCNA_01777	0.83	-0.5
1,904,822	-		CCNA_01777	0.83	-1.3
1,904,822	-		CCNA_01777	0.83	+0.4
1,904,853	-		CCNA_01777	0.85	-0.8
1,904,855	+		CCNA_01777	0.85	+0.5
1,904,855	+		CCNA_01777	0.85	+0.7
1,904,865	+		CCNA_01777	0.86	+0.6
1,904,875	-		CCNA_01777	0.87	-0.8
1,904,924	+		CCNA_01777	0.90	+0.4
1,904,924	+		CCNA_01777	0.90	+0.8
1,904,932	-				+0.3
1,904,932	-				-0.8
1,904,932	-				+0.7
1,904,932	-				+0.5
1,904,956	+				+0.0
1,904,972	+				+1.3
1,904,998	+				-0.3
1,905,006	-				-0.3
1,905,033	+				-0.2
1,905,034	+				-0.7
1,905,058	+				-0.8
1,905,088	-				-0.7
1,905,095	+				+0.1
1,905,103	-				-0.8
1,905,103	-				-1.4
1,905,103	-				-0.2
1,905,105	+				-0.0
1,905,113	-				-1.7
1,905,250	+				+0.4
1,905,504	+		CCNA_01778	0.23	+0.2
1,905,512	-		CCNA_01778	0.24	-0.6
1,905,517	-		CCNA_01778	0.24	-1.1
1,905,600	-		CCNA_01778	0.31	-0.1
1,905,675	-		CCNA_01778	0.36	-0.8
1,905,675	-		CCNA_01778	0.36	+0.8
1,905,675	-		CCNA_01778	0.36	-0.2
1,905,740	-		CCNA_01778	0.41	-0.2
1,905,740	-		CCNA_01778	0.41	-0.3
1,905,780	-		CCNA_01778	0.45	-0.4
1,905,817	-		CCNA_01778	0.47	-0.7
1,905,846	+		CCNA_01778	0.50	-0.6
1,905,897	+		CCNA_01778	0.54	-0.1
1,905,897	+		CCNA_01778	0.54	-0.5
1,905,897	+		CCNA_01778	0.54	+0.9
1,905,897	+		CCNA_01778	0.54	+0.4
1,905,897	+		CCNA_01778	0.54	+0.6
1,905,897	+		CCNA_01778	0.54	+0.6
1,905,897	+		CCNA_01778	0.54	+0.9
1,905,897	+		CCNA_01778	0.54	+0.3
1,905,897	+		CCNA_01778	0.54	+0.4
1,905,897	+		CCNA_01778	0.54	+0.5
1,905,897	+		CCNA_01778	0.54	+0.4
1,905,897	+		CCNA_01778	0.54	+2.1
1,905,897	+		CCNA_01778	0.54	+1.4
1,905,897	+		CCNA_01778	0.54	+0.5
1,905,897	+		CCNA_01778	0.54	+0.9
1,905,897	+		CCNA_01778	0.54	+0.5
1,905,897	+		CCNA_01778	0.54	+0.5
1,905,897	+		CCNA_01778	0.54	+0.3
1,905,898	+		CCNA_01778	0.54	-0.0
1,905,905	-		CCNA_01778	0.54	+0.3
1,905,905	-		CCNA_01778	0.54	-0.4
1,905,905	-		CCNA_01778	0.54	+0.3
1,905,905	-		CCNA_01778	0.54	+1.3
1,905,905	-		CCNA_01778	0.54	-0.1
1,905,905	-		CCNA_01778	0.54	-0.9
1,905,905	-		CCNA_01778	0.54	-1.4
1,905,905	-		CCNA_01778	0.54	+1.8
1,905,905	-		CCNA_01778	0.54	+0.3
1,905,905	-		CCNA_01778	0.54	-0.5
1,905,905	-		CCNA_01778	0.54	+0.6
1,905,906	-		CCNA_01778	0.54	-0.4
1,905,939	+		CCNA_01778	0.57	+0.4
1,905,949	-		CCNA_01778	0.58	-1.5
1,905,960	+		CCNA_01778	0.58	+0.5
1,906,033	+		CCNA_01778	0.64	-0.4
1,906,091	-		CCNA_01778	0.69	+0.0