Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01758
Experiment: PYE with CHIR-090 4 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | PYE with CHIR-090 4 ug/mL |
---|---|---|---|---|---|
remove | |||||
1,883,631 | + | CCNA_01756 | 0.80 | +0.0 | |
1,883,634 | - | CCNA_01756 | 0.82 | +0.3 | |
1,883,639 | - | CCNA_01756 | 0.87 | -2.2 | |
1,883,644 | - | +0.2 | |||
1,883,686 | - | +0.1 | |||
1,883,707 | + | -1.8 | |||
1,883,753 | + | +1.2 | |||
1,883,753 | + | +1.1 | |||
1,883,761 | - | -0.3 | |||
1,883,840 | - | CCNA_01757 | 0.15 | -0.6 | |
1,883,963 | + | CCNA_01757 | 0.29 | +0.1 | |
1,884,003 | + | CCNA_01757 | 0.34 | -1.3 | |
1,884,021 | - | CCNA_01757 | 0.36 | -0.8 | |
1,884,021 | - | CCNA_01757 | 0.36 | +0.6 | |
1,884,037 | - | CCNA_01757 | 0.38 | +1.0 | |
1,884,037 | - | CCNA_01757 | 0.38 | -0.8 | |
1,884,138 | - | CCNA_01757 | 0.51 | -2.0 | |
1,884,178 | + | CCNA_01757 | 0.55 | +0.9 | |
1,884,178 | + | CCNA_01757 | 0.55 | -0.7 | |
1,884,366 | + | CCNA_01757 | 0.78 | -1.8 | |
1,884,393 | - | CCNA_01757 | 0.81 | -2.1 | |
1,884,456 | - | CCNA_01757 | 0.89 | +0.7 | |
1,884,471 | - | +2.2 | |||
1,884,486 | - | -0.2 | |||
1,884,499 | - | +2.2 | |||
1,884,542 | + | +0.2 | |||
1,884,550 | - | +0.8 | |||
1,884,550 | - | +0.1 | |||
1,884,556 | + | -0.2 | |||
1,884,556 | + | +1.2 | |||
1,884,573 | - | +0.4 | |||
1,884,590 | + | -1.5 |
Or see this region's nucleotide sequence