Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01526

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
1,633,719	+		CCNA_01524	0.81	+0.4
1,633,730	+		CCNA_01524	0.81	-0.5
1,633,783	+		CCNA_01524	0.84	-0.3
1,633,783	+		CCNA_01524	0.84	-2.2
1,633,789	+		CCNA_01524	0.84	+0.6
1,633,789	+		CCNA_01524	0.84	+0.3
1,633,791	-		CCNA_01524	0.85	+0.2
1,633,797	-		CCNA_01524	0.85	+1.6
1,633,797	-		CCNA_01524	0.85	+0.3
1,633,808	+		CCNA_01524	0.85	+0.4
1,633,827	+		CCNA_01524	0.87	-0.1
1,633,847	+		CCNA_01524	0.88	+0.7
1,633,852	+		CCNA_01524	0.88	-0.2
1,633,855	-		CCNA_01524	0.88	+0.2
1,633,855	-		CCNA_01524	0.88	-1.4
1,633,915	+				-0.1
1,633,915	+				+0.1
1,633,915	+				-0.8
1,633,923	-				+1.5
1,633,939	+				+0.0
1,633,939	+				+0.7
1,633,993	-				-1.0
1,634,012	+				+0.9
1,634,012	+				-1.4
1,634,012	+				+0.3
1,634,025	-				-0.9
1,634,026	-				-0.1
1,634,026	-				+0.1
1,634,049	-				-1.0
1,634,070	-				-1.1
1,634,072	-				-0.8
1,634,075	+				-0.4
1,634,083	-				-0.1
1,634,083	-				-2.0
1,634,083	-				-1.3
1,634,112	+				-1.2
1,634,112	+				+0.0
1,634,114	+				+1.9
1,634,124	+				+0.2
1,634,124	+				-0.2
1,634,124	+				+0.0
1,634,124	+				+0.1
1,634,124	+				+0.1
1,634,124	+				-0.2
1,634,124	+				-0.1
1,634,132	-				+1.0
1,634,132	-				+0.9
1,634,132	-				-0.6
1,634,132	-				-0.9
1,634,144	+				-0.8
1,634,234	-				+0.5
1,634,254	-				-0.2
1,634,320	+		CCNA_01525	0.13	+1.3
1,634,328	+		CCNA_01525	0.15	+1.0
1,634,347	+		CCNA_01525	0.19	+0.2
1,634,347	+		CCNA_01525	0.19	+1.1
1,634,356	+		CCNA_01525	0.21	+0.3
1,634,542	-		CCNA_01525	0.65	+0.3
1,634,545	+		CCNA_01525	0.65	+0.2
1,634,592	+		CCNA_01525	0.77	-1.1
1,634,599	+		CCNA_01525	0.78	-0.1
1,634,642	+		CCNA_01525	0.88	+0.8
1,634,690	+				+0.4
1,634,719	+		CCNA_01526	0.19	+0.5
1,634,758	+		CCNA_01526	0.29	+0.3
1,634,793	-		CCNA_01526	0.39	+0.3
1,634,806	-		CCNA_01526	0.43	+0.1
1,634,812	+		CCNA_01526	0.44	-0.1
1,634,820	-		CCNA_01526	0.47	-0.3
1,634,820	-		CCNA_01526	0.47	+0.1
1,634,820	-		CCNA_01526	0.47	+0.7
1,634,857	+		CCNA_01526	0.57	+0.5
1,634,895	+		CCNA_01526	0.67	+0.9
1,634,896	+		CCNA_01526	0.67	+0.4
1,634,903	-		CCNA_01526	0.69	-0.3
1,634,914	+		CCNA_01526	0.72	+0.4
1,634,914	+		CCNA_01526	0.72	+0.4
1,634,943	+		CCNA_01526	0.80	+0.7
1,635,031	+				+0.4
1,635,032	+				+0.4
1,635,032	+				+0.3
1,635,033	+				+0.5
1,635,039	-				-1.6
1,635,320	+				+0.6
1,635,325	+				+0.1
1,635,342	+				-0.3
1,635,342	+				+0.3
1,635,350	-		CCNA_01527	0.11	+0.3
1,635,355	-		CCNA_01527	0.11	-0.0
1,635,386	+		CCNA_01527	0.15	-0.2
1,635,386	+		CCNA_01527	0.15	-0.1
1,635,394	-		CCNA_01527	0.16	-0.9
1,635,394	-		CCNA_01527	0.16	+0.1
1,635,407	-		CCNA_01527	0.18	+0.1
1,635,424	-		CCNA_01527	0.20	-0.9
1,635,438	+		CCNA_01527	0.22	+0.1
1,635,438	+		CCNA_01527	0.22	+1.0
1,635,438	+		CCNA_01527	0.22	-0.1
1,635,446	-		CCNA_01527	0.23	+1.3
1,635,499	+		CCNA_01527	0.29	+0.3
1,635,507	-		CCNA_01527	0.30	-0.6
1,635,507	-		CCNA_01527	0.30	+0.4
1,635,509	-		CCNA_01527	0.30	+0.2
1,635,517	-		CCNA_01527	0.31	-0.6
1,635,524	+		CCNA_01527	0.32	+0.8
1,635,546	+		CCNA_01527	0.35	+0.4
1,635,547	-		CCNA_01527	0.35	-0.4
1,635,584	+		CCNA_01527	0.39	+0.6
1,635,600	-		CCNA_01527	0.41	-0.1
1,635,634	-		CCNA_01527	0.45	+0.2
1,635,634	-		CCNA_01527	0.45	-0.7
1,635,653	+		CCNA_01527	0.48	+0.7
1,635,653	+		CCNA_01527	0.48	+0.3
1,635,653	+		CCNA_01527	0.48	-0.1
1,635,660	+		CCNA_01527	0.49	+0.7
1,635,661	-		CCNA_01527	0.49	-0.1
1,635,680	-		CCNA_01527	0.51	+1.6
1,635,732	-		CCNA_01527	0.57	-1.5
1,635,738	+		CCNA_01527	0.58	-0.3
1,635,738	+		CCNA_01527	0.58	+1.0
1,635,746	-		CCNA_01527	0.59	-1.0
1,635,746	-		CCNA_01527	0.59	+0.5
1,635,746	-		CCNA_01527	0.59	-0.6
1,635,746	-		CCNA_01527	0.59	-0.5
1,635,885	+		CCNA_01527	0.76	-0.0
1,635,893	-		CCNA_01527	0.77	-0.3
1,635,897	+		CCNA_01527	0.77	+0.1
1,635,899	+		CCNA_01527	0.78	+0.4
1,635,899	-		CCNA_01527	0.78	-0.9
1,635,905	-		CCNA_01527	0.78	+2.0
1,635,905	-		CCNA_01527	0.78	+0.9
1,635,905	-		CCNA_01527	0.78	-0.3
1,635,918	+		CCNA_01527	0.80	+0.5
1,635,918	+		CCNA_01527	0.80	+0.0
1,635,926	-		CCNA_01527	0.81	-0.4
1,635,926	-		CCNA_01527	0.81	+0.4
1,635,926	-		CCNA_01527	0.81	-0.4
1,635,926	-		CCNA_01527	0.81	+1.4
1,635,936	-		CCNA_01527	0.82	+0.1
1,635,947	-		CCNA_01527	0.83	+0.2
1,635,968	+		CCNA_01527	0.86	-0.1
1,635,971	-		CCNA_01527	0.86	-0.4
1,635,994	-		CCNA_01527	0.89	+0.7
1,635,996	+		CCNA_01527	0.89	-0.0
1,636,010	+				+0.6