Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01486

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
1,591,731	-		CCNA_01485	0.17	+1.0
1,591,773	-		CCNA_01485	0.21	-0.6
1,591,823	-		CCNA_01485	0.25	-0.7
1,591,827	+		CCNA_01485	0.26	-0.5
1,591,902	+		CCNA_01485	0.32	-0.2
1,591,930	-		CCNA_01485	0.35	+0.9
1,591,948	-		CCNA_01485	0.36	+1.1
1,591,953	-		CCNA_01485	0.37	+0.5
1,591,960	+		CCNA_01485	0.37	+0.2
1,591,970	+		CCNA_01485	0.38	-0.9
1,591,978	-		CCNA_01485	0.39	-0.7
1,591,978	-		CCNA_01485	0.39	-0.1
1,591,978	-		CCNA_01485	0.39	+1.7
1,592,007	+		CCNA_01485	0.41	+0.4
1,592,012	+		CCNA_01485	0.42	-0.8
1,592,040	+		CCNA_01485	0.44	+1.4
1,592,053	+		CCNA_01485	0.45	-0.6
1,592,055	+		CCNA_01485	0.46	+0.0
1,592,055	+		CCNA_01485	0.46	-0.8
1,592,055	+		CCNA_01485	0.46	-0.8
1,592,055	+		CCNA_01485	0.46	-1.4
1,592,061	-		CCNA_01485	0.46	-0.9
1,592,061	-		CCNA_01485	0.46	-0.2
1,592,063	-		CCNA_01485	0.46	+0.2
1,592,071	-		CCNA_01485	0.47	-0.1
1,592,078	+		CCNA_01485	0.48	-0.5
1,592,081	-		CCNA_01485	0.48	-0.4
1,592,101	-		CCNA_01485	0.50	-0.8
1,592,244	+		CCNA_01485	0.62	-1.3
1,592,244	+		CCNA_01485	0.62	+0.8
1,592,244	-		CCNA_01485	0.62	+0.1
1,592,252	-		CCNA_01485	0.63	+0.5
1,592,252	-		CCNA_01485	0.63	+1.3
1,592,254	+		CCNA_01485	0.63	-0.1
1,592,268	+		CCNA_01485	0.64	-0.3
1,592,297	-		CCNA_01485	0.67	-1.5
1,592,297	-		CCNA_01485	0.67	-0.9
1,592,313	+		CCNA_01485	0.68	-1.3
1,592,321	-		CCNA_01485	0.69	+0.1
1,592,321	-		CCNA_01485	0.69	-0.7
1,592,358	-		CCNA_01485	0.72	-0.1
1,592,359	+		CCNA_01485	0.72	-0.9
1,592,412	-		CCNA_01485	0.77	-0.8
1,592,447	-		CCNA_01485	0.80	-1.5
1,592,464	+		CCNA_01485	0.82	-0.4
1,592,490	+		CCNA_01485	0.84	-2.5
1,592,490	+		CCNA_01485	0.84	-1.6
1,592,490	+		CCNA_01485	0.84	-1.0
1,592,498	-		CCNA_01485	0.85	-1.3
1,592,498	-		CCNA_01485	0.85	-0.5
1,592,509	-		CCNA_01485	0.86	-0.9
1,592,541	+		CCNA_01485	0.88	+0.1
1,592,544	-		CCNA_01485	0.89	+0.8
1,592,546	+		CCNA_01485	0.89	+0.2
1,592,546	+		CCNA_01485	0.89	+0.5
1,592,547	+		CCNA_01485	0.89	+1.2
1,592,547	+		CCNA_01485	0.89	-0.1
1,592,547	+		CCNA_01485	0.89	-1.7
1,592,554	-		CCNA_01485	0.90	+1.9
1,592,554	-		CCNA_01485	0.90	-1.3
1,592,554	-		CCNA_01485	0.90	-0.9
1,592,620	+				+0.0
1,592,639	-				+0.8
1,592,639	-				+0.7
1,592,654	-				-0.1
1,592,654	-				+0.3
1,592,667	-				+0.3
1,592,689	-				-1.6
1,592,745	-				+0.1
1,592,754	+				-0.4
1,592,754	+				+0.1
1,592,764	-				+0.4
1,592,766	+				+0.9
1,592,771	+				-1.1
1,592,774	-				-0.7
1,592,921	+		CCNA_01486	0.21	-1.5
1,592,924	-		CCNA_01486	0.21	-2.4
1,592,924	-		CCNA_01486	0.21	+0.1
1,592,924	-		CCNA_01486	0.21	+0.3
1,592,926	+		CCNA_01486	0.21	-1.3
1,592,929	-		CCNA_01486	0.21	+0.9
1,592,929	-		CCNA_01486	0.21	-0.7
1,592,932	+		CCNA_01486	0.22	-0.7
1,592,941	+		CCNA_01486	0.23	-1.2
1,592,941	+		CCNA_01486	0.23	+0.9
1,592,966	-		CCNA_01486	0.25	-0.2
1,592,970	+		CCNA_01486	0.25	+1.2
1,592,988	-		CCNA_01486	0.27	+0.0
1,593,037	+		CCNA_01486	0.32	+0.8
1,593,045	+		CCNA_01486	0.33	+1.8
1,593,045	+		CCNA_01486	0.33	-0.3
1,593,053	-		CCNA_01486	0.34	-0.1
1,593,053	-		CCNA_01486	0.34	+1.3
1,593,070	-		CCNA_01486	0.35	+0.4
1,593,071	+		CCNA_01486	0.35	-1.2
1,593,079	-		CCNA_01486	0.36	+0.2
1,593,186	+		CCNA_01486	0.47	-0.0
1,593,212	-		CCNA_01486	0.49	+1.4
1,593,225	+		CCNA_01486	0.51	+0.0
1,593,233	-		CCNA_01486	0.51	-0.5
1,593,238	-		CCNA_01486	0.52	-0.2
1,593,248	+		CCNA_01486	0.53	+0.5
1,593,269	-		CCNA_01486	0.55	+0.5
1,593,312	-		CCNA_01486	0.59	+0.7
1,593,361	-		CCNA_01486	0.64	-0.8
1,593,385	+		CCNA_01486	0.66	-2.5
1,593,385	+		CCNA_01486	0.66	-0.2
1,593,385	+		CCNA_01486	0.66	-0.6
1,593,385	+		CCNA_01486	0.66	-0.2
1,593,385	+		CCNA_01486	0.66	+0.1
1,593,393	-		CCNA_01486	0.67	+0.3
1,593,393	-		CCNA_01486	0.67	+0.6
1,593,434	+		CCNA_01486	0.71	-0.9
1,593,442	-		CCNA_01486	0.72	-1.3
1,593,455	+		CCNA_01486	0.73	-2.0
1,593,472	-		CCNA_01486	0.75	-3.2
1,593,559	+		CCNA_01486	0.84	+2.5
1,593,579	+		CCNA_01486	0.86	-0.4
1,593,619	-		CCNA_01486	0.90	+0.7
1,593,641	-				+0.7
1,593,642	+				-0.4
1,593,658	+				-0.3
1,593,695	+				-0.9
1,593,817	+				+1.4
1,593,820	-				-1.1
1,593,820	-				+0.3
1,593,825	-				-0.8
1,593,825	-				-1.4
1,593,825	-				+0.1
1,593,835	-				-0.3
1,593,856	+				+0.7
1,593,869	+				+0.3
1,593,874	+				+0.4
1,593,884	-				-2.2
1,593,905	+				-1.1
1,593,911	+				-0.1
1,593,959	-				+0.5
1,593,962	+				+0.2
1,594,096	+		CCNA_01487	0.27	+0.4
1,594,096	+		CCNA_01487	0.27	-0.0
1,594,096	+		CCNA_01487	0.27	+0.4
1,594,096	+		CCNA_01487	0.27	-0.2
1,594,096	+		CCNA_01487	0.27	-0.1
1,594,104	-		CCNA_01487	0.28	+1.6
1,594,121	+		CCNA_01487	0.30	-2.5
1,594,121	+		CCNA_01487	0.30	-0.0
1,594,129	-		CCNA_01487	0.31	+0.1
1,594,148	-		CCNA_01487	0.34	-1.7
1,594,191	+		CCNA_01487	0.39	+0.8
1,594,201	+		CCNA_01487	0.41	+0.3
1,594,225	+		CCNA_01487	0.44	+0.8
1,594,225	+		CCNA_01487	0.44	-0.8
1,594,243	+		CCNA_01487	0.46	-0.1
1,594,261	-		CCNA_01487	0.49	+1.8
1,594,347	-		CCNA_01487	0.60	+1.3
1,594,407	+		CCNA_01487	0.68	+0.7
1,594,433	+		CCNA_01487	0.72	+1.1
1,594,433	+		CCNA_01487	0.72	-2.7
1,594,440	+		CCNA_01487	0.73	-1.1
1,594,441	-		CCNA_01487	0.73	-0.9
1,594,441	-		CCNA_01487	0.73	-0.1
1,594,441	-		CCNA_01487	0.73	-0.4
1,594,441	-		CCNA_01487	0.73	-0.1
1,594,441	-		CCNA_01487	0.73	-0.7
1,594,441	-		CCNA_01487	0.73	+0.1
1,594,442	-		CCNA_01487	0.73	-0.1
1,594,459	+		CCNA_01487	0.75	-0.3
1,594,467	-		CCNA_01487	0.76	-0.6
1,594,467	-		CCNA_01487	0.76	+0.1
1,594,469	+		CCNA_01487	0.77	+0.1
1,594,469	+		CCNA_01487	0.77	-0.3
1,594,540	-		CCNA_01487	0.86	+0.5
1,594,569	+				+0.1
1,594,577	-				+0.5
1,594,577	-				-1.4
1,594,595	+				+0.3
1,594,595	+				+0.6
1,594,595	+				-0.8
1,594,603	+				-0.2
1,594,638	+				-0.3
1,594,646	-				+0.2
1,594,646	-				-1.5
1,594,693	+				+0.7
1,594,701	-				+0.1