Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01447

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
1,558,535	+		CCNA_01446	0.24	+0.4
1,558,547	+		CCNA_01446	0.25	+0.9
1,558,579	+		CCNA_01446	0.27	+0.5
1,558,615	+		CCNA_01446	0.30	+1.5
1,558,615	+		CCNA_01446	0.30	+0.4
1,558,615	+		CCNA_01446	0.30	+2.4
1,558,618	-		CCNA_01446	0.30	+0.5
1,558,620	+		CCNA_01446	0.31	+0.5
1,558,620	+		CCNA_01446	0.31	-0.1
1,558,686	+		CCNA_01446	0.36	+0.6
1,558,749	-		CCNA_01446	0.41	-1.5
1,558,769	-		CCNA_01446	0.43	-0.9
1,558,770	+		CCNA_01446	0.43	+1.1
1,558,784	-		CCNA_01446	0.44	-1.2
1,558,785	+		CCNA_01446	0.44	+1.1
1,558,793	-		CCNA_01446	0.45	-0.9
1,558,795	+		CCNA_01446	0.45	+0.8
1,558,796	+		CCNA_01446	0.45	-0.5
1,558,932	-		CCNA_01446	0.56	-0.3
1,558,956	+		CCNA_01446	0.58	+1.4
1,558,956	+		CCNA_01446	0.58	+0.6
1,558,964	-		CCNA_01446	0.59	-1.1
1,558,964	-		CCNA_01446	0.59	-0.6
1,558,964	-		CCNA_01446	0.59	-0.5
1,558,964	-		CCNA_01446	0.59	+0.5
1,558,969	+		CCNA_01446	0.59	+0.8
1,558,970	-		CCNA_01446	0.59	+0.9
1,558,990	+		CCNA_01446	0.61	+0.8
1,559,048	-		CCNA_01446	0.66	+0.9
1,559,079	-		CCNA_01446	0.68	-0.2
1,559,092	+		CCNA_01446	0.69	+0.2
1,559,092	+		CCNA_01446	0.69	-0.7
1,559,092	+		CCNA_01446	0.69	+0.3
1,559,100	-		CCNA_01446	0.70	+0.9
1,559,100	-		CCNA_01446	0.70	-0.7
1,559,100	-		CCNA_01446	0.70	+2.3
1,559,100	-		CCNA_01446	0.70	-1.8
1,559,100	-		CCNA_01446	0.70	-0.3
1,559,104	+		CCNA_01446	0.70	+0.7
1,559,109	+		CCNA_01446	0.71	+0.5
1,559,110	-		CCNA_01446	0.71	-0.0
1,559,168	-		CCNA_01446	0.76	-1.3
1,559,177	-		CCNA_01446	0.76	-1.0
1,559,182	+		CCNA_01446	0.77	+0.4
1,559,182	+		CCNA_01446	0.77	-0.4
1,559,190	-		CCNA_01446	0.77	+0.2
1,559,192	+		CCNA_01446	0.77	+0.3
1,559,192	+		CCNA_01446	0.77	+1.5
1,559,200	-		CCNA_01446	0.78	-2.0
1,559,206	+		CCNA_01446	0.79	+1.1
1,559,214	-		CCNA_01446	0.79	+0.2
1,559,240	-		CCNA_01446	0.81	-0.2
1,559,240	-		CCNA_01446	0.81	+0.3
1,559,265	+		CCNA_01446	0.83	-0.1
1,559,318	+		CCNA_01446	0.88	+0.6
1,559,318	+		CCNA_01446	0.88	+0.9
1,559,326	-		CCNA_01446	0.88	-0.8
1,559,326	-		CCNA_01446	0.88	+0.3
1,559,326	-		CCNA_01446	0.88	-0.5
1,559,326	-		CCNA_01446	0.88	-0.4
1,559,354	+				+0.0
1,559,358	+				+0.6
1,559,362	-				+0.9
1,559,366	-				+0.2
1,559,366	-				-0.8
1,559,373	-				-1.2
1,559,426	-				+0.5
1,559,455	+				+0.7
1,559,460	+				+0.4
1,559,460	+				+0.0
1,559,460	+				-0.0
1,559,460	+				+1.0
1,559,460	+				-1.5
1,559,460	+				+0.1
1,559,460	+				+0.7
1,559,460	+				-0.1
1,559,468	-				+0.5
1,559,468	-				-0.6
1,559,468	-				+0.6
1,559,468	-				+0.0
1,559,468	-				+1.1
1,559,468	-				-0.4
1,559,514	+				-0.0
1,559,867	-		CCNA_01447	0.28	+0.9
1,560,879	+				-0.3
1,561,089	-		CCNA_01448	0.23	+0.3
1,561,139	+		CCNA_01448	0.29	-0.5
1,561,172	+		CCNA_01448	0.32	+0.4
1,561,180	-		CCNA_01448	0.33	-0.3
1,561,235	-		CCNA_01448	0.39	-0.1
1,561,310	+		CCNA_01448	0.46	-1.0
1,561,310	+		CCNA_01448	0.46	+0.3
1,561,328	+		CCNA_01448	0.48	+0.9
1,561,328	+		CCNA_01448	0.48	+1.1
1,561,334	+		CCNA_01448	0.49	-0.2
1,561,363	+		CCNA_01448	0.52	-0.3
1,561,365	+		CCNA_01448	0.52	+0.3
1,561,373	-		CCNA_01448	0.53	-0.9
1,561,486	+		CCNA_01448	0.65	+0.6
1,561,486	+		CCNA_01448	0.65	-0.1
1,561,494	-		CCNA_01448	0.66	-0.7
1,561,517	+		CCNA_01448	0.68	+0.5
1,561,527	+		CCNA_01448	0.69	-0.1
1,561,527	+		CCNA_01448	0.69	-0.5
1,561,542	+		CCNA_01448	0.71	+1.4
1,561,560	+		CCNA_01448	0.73	+0.2
1,561,601	-		CCNA_01448	0.77	-0.3
1,561,751	+				+0.6
1,561,761	-				+1.0