Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01053

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
1,151,214	+				+0.2
1,151,221	-				+0.2
1,151,248	+				+0.6
1,151,251	-				-0.5
1,151,272	+				+0.1
1,151,272	+				+0.4
1,151,272	+				-0.7
1,151,272	+				+1.5
1,151,272	+				+0.7
1,151,272	+				+0.7
1,151,277	+				+0.1
1,151,277	+				-0.4
1,151,277	+				-0.3
1,151,280	-				-0.9
1,151,280	-				-0.7
1,151,280	-				-1.7
1,151,280	-				-0.7
1,151,280	-				-0.7
1,151,280	-				+0.3
1,151,280	-				-0.1
1,151,280	-				-0.4
1,151,280	-				-0.7
1,151,280	-				-0.7
1,151,280	-				-2.3
1,151,280	-				-1.5
1,151,280	-				-0.9
1,151,285	-				-0.5
1,151,285	-				+0.9
1,151,314	-				-0.1
1,151,321	-				+0.3
1,151,360	-				-0.7
1,151,360	-				+0.5
1,151,360	-				-0.5
1,151,365	-				-0.9
1,151,367	+				+1.3
1,151,420	+				-1.1
1,151,509	+				-0.3
1,151,532	+				+0.2
1,151,566	+				-0.3
1,151,566	-				+0.2
1,151,593	-				+0.3
1,151,633	+		CCNA_01052	0.11	-0.4
1,151,639	+		CCNA_01052	0.12	-0.0
1,151,647	-		CCNA_01052	0.13	-1.3
1,151,672	-		CCNA_01052	0.16	+0.3
1,151,672	-		CCNA_01052	0.16	+1.8
1,151,692	+		CCNA_01052	0.19	-0.9
1,151,777	+		CCNA_01052	0.31	+0.2
1,151,785	-		CCNA_01052	0.32	-0.4
1,151,789	-		CCNA_01052	0.33	-0.2
1,151,789	-		CCNA_01052	0.33	-0.4
1,151,817	+		CCNA_01052	0.36	-0.6
1,151,839	+		CCNA_01052	0.39	-0.2
1,151,885	-		CCNA_01052	0.46	-0.5
1,151,896	-		CCNA_01052	0.47	+0.5
1,151,908	+		CCNA_01052	0.49	+0.1
1,151,913	+		CCNA_01052	0.50	+1.1
1,151,916	-		CCNA_01052	0.50	-0.6
1,151,931	+		CCNA_01052	0.52	-1.1
1,151,949	+		CCNA_01052	0.55	-0.6
1,151,981	+		CCNA_01052	0.59	+1.0
1,151,983	-		CCNA_01052	0.59	-0.5
1,151,983	-		CCNA_01052	0.59	+0.5
1,151,988	-		CCNA_01052	0.60	-0.7
1,151,989	-		CCNA_01052	0.60	+0.8
1,152,001	+		CCNA_01052	0.62	-0.2
1,152,012	+		CCNA_01052	0.63	-0.4
1,152,041	+		CCNA_01052	0.67	-1.0
1,152,051	+		CCNA_01052	0.69	-0.9
1,152,120	-		CCNA_01052	0.78	-0.7
1,152,125	+		CCNA_01052	0.79	-0.1
1,152,135	+		CCNA_01052	0.80	+0.1
1,152,171	+		CCNA_01052	0.85	+0.6
1,152,171	+		CCNA_01052	0.85	-0.9
1,152,176	+		CCNA_01052	0.86	+0.2
1,152,177	+		CCNA_01052	0.86	-1.2
1,152,265	+				-0.6
1,152,361	+		CCNA_01053	0.14	-0.3
1,152,379	-		CCNA_01053	0.16	+0.7
1,152,379	-		CCNA_01053	0.16	-1.5
1,152,422	+		CCNA_01053	0.20	-0.4
1,152,436	-		CCNA_01053	0.21	-0.2
1,152,533	-		CCNA_01053	0.30	-0.3
1,152,542	+		CCNA_01053	0.31	-1.9
1,152,542	+		CCNA_01053	0.31	+0.9
1,152,550	-		CCNA_01053	0.32	-0.4
1,152,550	-		CCNA_01053	0.32	-1.4
1,152,563	+		CCNA_01053	0.33	-0.9
1,152,563	+		CCNA_01053	0.33	-0.1
1,152,605	+		CCNA_01053	0.36	-0.5
1,152,691	+		CCNA_01053	0.44	+0.3
1,152,691	+		CCNA_01053	0.44	+0.9
1,152,691	+		CCNA_01053	0.44	-0.9
1,152,699	-		CCNA_01053	0.45	-0.1
1,152,706	+		CCNA_01053	0.46	+0.1
1,152,706	+		CCNA_01053	0.46	+0.8
1,152,706	-		CCNA_01053	0.46	-0.1
1,152,768	+		CCNA_01053	0.51	+0.0
1,152,770	-		CCNA_01053	0.51	-0.2
1,152,770	-		CCNA_01053	0.51	-0.6
1,152,779	-		CCNA_01053	0.52	-0.5
1,152,817	+		CCNA_01053	0.56	-1.4
1,152,819	-		CCNA_01053	0.56	-0.4
1,152,821	+		CCNA_01053	0.56	+0.0
1,152,829	-		CCNA_01053	0.57	-0.5
1,152,829	-		CCNA_01053	0.57	-0.3
1,152,845	+		CCNA_01053	0.58	+0.5
1,152,845	+		CCNA_01053	0.58	-0.7
1,152,848	-		CCNA_01053	0.58	-0.0
1,152,853	-		CCNA_01053	0.59	+0.2
1,152,853	-		CCNA_01053	0.59	-0.9
1,152,853	-		CCNA_01053	0.59	-0.9
1,152,853	-		CCNA_01053	0.59	-0.3
1,152,853	-		CCNA_01053	0.59	-0.4
1,152,853	-		CCNA_01053	0.59	-0.8
1,152,853	-		CCNA_01053	0.59	-0.4
1,152,893	-		CCNA_01053	0.63	+0.9
1,152,935	+		CCNA_01053	0.66	+0.0
1,152,945	+		CCNA_01053	0.67	+0.2
1,152,945	+		CCNA_01053	0.67	-0.4
1,152,945	+		CCNA_01053	0.67	-0.3
1,152,945	+		CCNA_01053	0.67	-1.3
1,152,945	+		CCNA_01053	0.67	-0.3
1,152,950	+		CCNA_01053	0.68	+0.3
1,152,950	+		CCNA_01053	0.68	-0.5
1,152,953	-		CCNA_01053	0.68	-0.4
1,152,963	-		CCNA_01053	0.69	+0.1
1,152,970	+		CCNA_01053	0.69	+0.4
1,152,977	+		CCNA_01053	0.70	-1.0
1,152,978	-		CCNA_01053	0.70	-0.3
1,152,987	+		CCNA_01053	0.71	-0.2
1,152,992	+		CCNA_01053	0.71	+0.8
1,153,000	-		CCNA_01053	0.72	-0.2
1,153,019	+		CCNA_01053	0.74	-0.8
1,153,021	-		CCNA_01053	0.74	+0.2
1,153,026	+		CCNA_01053	0.75	-2.2
1,153,026	+		CCNA_01053	0.75	+0.9
1,153,036	+		CCNA_01053	0.75	+0.9
1,153,044	-		CCNA_01053	0.76	-2.3
1,153,191	-		CCNA_01053	0.89	-1.3
1,153,215	-				-0.5
1,153,222	-				-0.5
1,153,284	+				+1.2
1,153,284	+				-0.0
1,153,320	-				-0.5
1,153,325	-				-0.5
1,153,354	+				-1.1
1,153,426	+				-0.8
1,153,431	+				+0.9
1,153,431	+				-1.6
1,153,441	+				+0.4
1,153,461	-				+0.6
1,153,521	+		CCNA_01054	0.13	-0.5
1,153,521	+		CCNA_01054	0.13	-0.6
1,153,521	+		CCNA_01054	0.13	-0.1
1,153,556	-		CCNA_01054	0.15	-0.2
1,153,655	-		CCNA_01054	0.22	-1.3
1,153,664	-		CCNA_01054	0.22	+0.2
1,153,687	-		CCNA_01054	0.24	-1.2
1,153,705	+		CCNA_01054	0.25	-1.7
1,153,727	-		CCNA_01054	0.26	+0.1
1,153,750	+		CCNA_01054	0.28	-0.6
1,153,750	+		CCNA_01054	0.28	-0.5
1,153,812	+		CCNA_01054	0.32	+0.4
1,153,814	-		CCNA_01054	0.32	+0.8
1,153,827	+		CCNA_01054	0.33	+0.5
1,153,840	-		CCNA_01054	0.34	+1.6
1,153,974	+		CCNA_01054	0.43	+0.5
1,153,977	-		CCNA_01054	0.43	-0.2
1,153,977	-		CCNA_01054	0.43	-1.1
1,153,977	-		CCNA_01054	0.43	+0.1
1,153,995	+		CCNA_01054	0.44	-0.1
1,154,014	+		CCNA_01054	0.46	+0.9
1,154,014	+		CCNA_01054	0.46	+1.2
1,154,032	+		CCNA_01054	0.47	-0.1
1,154,051	-		CCNA_01054	0.48	+0.4
1,154,054	+		CCNA_01054	0.48	+0.4
1,154,054	+		CCNA_01054	0.48	+0.2
1,154,054	+		CCNA_01054	0.48	-0.8
1,154,062	-		CCNA_01054	0.49	-1.0
1,154,062	-		CCNA_01054	0.49	+0.1
1,154,066	-		CCNA_01054	0.49	+1.5
1,154,084	+		CCNA_01054	0.50	-0.2
1,154,136	-		CCNA_01054	0.54	-0.1