Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19210 and CA264_19215 are separated by 308 nucleotides CA264_19215 and CA264_19220 are separated by 27 nucleotides CA264_19220 and CA264_19225 are separated by 6 nucleotides CA264_19225 and CA264_19230 overlap by 4 nucleotides
CA264_19210: CA264_19210 - SAM-dependent methyltransferase, at 4,463,357 to 4,464,097
_19210
CA264_19215: CA264_19215 - RNA polymerase subunit sigma, at 4,464,406 to 4,464,999
_19215
CA264_19220: CA264_19220 - hypothetical protein, at 4,465,027 to 4,465,308
_19220
CA264_19225: CA264_19225 - guanylate kinase, at 4,465,315 to 4,465,899
_19225
CA264_19230: CA264_19230 - nicotinate-nicotinamide nucleotide adenylyltransferase, at 4,465,896 to 4,466,468
_19230
Position (kb)
4465
4466 Strain fitness (log2 ratio)
-1
0
1
2 at 4464.030 kb on - strand at 4464.064 kb on + strand at 4464.064 kb on + strand at 4464.141 kb on + strand at 4464.141 kb on + strand at 4464.142 kb on - strand at 4464.145 kb on + strand at 4464.146 kb on - strand at 4464.146 kb on - strand at 4464.146 kb on - strand at 4464.172 kb on - strand at 4464.175 kb on + strand at 4464.186 kb on - strand at 4464.186 kb on - strand at 4464.233 kb on - strand at 4464.236 kb on + strand at 4464.270 kb on - strand at 4464.270 kb on - strand at 4464.271 kb on + strand at 4464.279 kb on + strand at 4464.338 kb on - strand at 4464.347 kb on - strand at 4464.360 kb on - strand at 4464.398 kb on + strand at 4464.399 kb on - strand at 4464.433 kb on - strand at 4464.436 kb on - strand at 4464.494 kb on - strand, within CA264_19215 at 4464.505 kb on + strand, within CA264_19215 at 4464.519 kb on - strand, within CA264_19215 at 4464.545 kb on + strand, within CA264_19215 at 4464.556 kb on + strand, within CA264_19215 at 4464.556 kb on + strand, within CA264_19215 at 4464.557 kb on - strand, within CA264_19215 at 4464.569 kb on - strand, within CA264_19215 at 4464.600 kb on + strand, within CA264_19215 at 4464.710 kb on - strand, within CA264_19215 at 4464.710 kb on - strand, within CA264_19215 at 4464.834 kb on + strand, within CA264_19215 at 4464.846 kb on + strand, within CA264_19215 at 4464.908 kb on + strand, within CA264_19215 at 4464.918 kb on - strand, within CA264_19215 at 4464.975 kb on + strand at 4464.976 kb on - strand at 4464.991 kb on - strand at 4465.023 kb on + strand at 4465.049 kb on + strand at 4465.097 kb on + strand, within CA264_19220 at 4465.109 kb on + strand, within CA264_19220 at 4465.110 kb on - strand, within CA264_19220 at 4465.167 kb on + strand, within CA264_19220 at 4465.264 kb on - strand, within CA264_19220 at 4465.305 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 4,464,030 - -1.1 4,464,064 + -0.5 4,464,064 + -0.4 4,464,141 + +0.8 4,464,141 + +0.8 4,464,142 - +0.2 4,464,145 + +0.9 4,464,146 - +0.7 4,464,146 - +1.0 4,464,146 - +1.0 4,464,172 - +1.4 4,464,175 + +1.4 4,464,186 - +1.2 4,464,186 - +1.2 4,464,233 - +0.8 4,464,236 + +0.9 4,464,270 - +1.0 4,464,270 - +1.0 4,464,271 + +1.1 4,464,279 + +1.2 4,464,338 - +0.5 4,464,347 - +1.2 4,464,360 - +1.4 4,464,398 + -0.1 4,464,399 - +1.6 4,464,433 - +1.4 4,464,436 - +0.8 4,464,494 - CA264_19215 0.15 +0.9 4,464,505 + CA264_19215 0.17 +1.0 4,464,519 - CA264_19215 0.19 +1.2 4,464,545 + CA264_19215 0.23 +1.4 4,464,556 + CA264_19215 0.25 +1.0 4,464,556 + CA264_19215 0.25 +1.2 4,464,557 - CA264_19215 0.25 +1.9 4,464,569 - CA264_19215 0.27 +2.0 4,464,600 + CA264_19215 0.33 +2.7 4,464,710 - CA264_19215 0.51 +0.2 4,464,710 - CA264_19215 0.51 +1.0 4,464,834 + CA264_19215 0.72 -1.2 4,464,846 + CA264_19215 0.74 +0.6 4,464,908 + CA264_19215 0.85 +0.1 4,464,918 - CA264_19215 0.86 +1.9 4,464,975 + +0.2 4,464,976 - +0.7 4,464,991 - -0.8 4,465,023 + +0.2 4,465,049 + -0.5 4,465,097 + CA264_19220 0.25 +0.3 4,465,109 + CA264_19220 0.29 -0.3 4,465,110 - CA264_19220 0.29 +0.6 4,465,167 + CA264_19220 0.50 +0.7 4,465,264 - CA264_19220 0.84 +1.7 4,465,305 - +0.7
Or see this region's nucleotide sequence