Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18685 and CA264_18690 are separated by 116 nucleotides CA264_18690 and CA264_18695 overlap by 4 nucleotides CA264_18695 and CA264_18700 are separated by 70 nucleotides
CA264_18685: CA264_18685 - ferredoxin, at 4,339,987 to 4,340,301
_18685
CA264_18690: CA264_18690 - hypothetical protein, at 4,340,418 to 4,341,197
_18690
CA264_18695: CA264_18695 - glycogen synthase, at 4,341,194 to 4,342,417
_18695
CA264_18700: CA264_18700 - cytochrome C biogenesis protein, at 4,342,488 to 4,345,085
_18700
Position (kb)
4341
4342
4343 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4340.334 kb on - strand at 4340.334 kb on - strand at 4340.347 kb on - strand at 4340.443 kb on - strand at 4341.189 kb on + strand at 4341.209 kb on - strand at 4341.209 kb on - strand at 4341.270 kb on + strand at 4341.310 kb on - strand at 4341.327 kb on + strand, within CA264_18695 at 4341.377 kb on + strand, within CA264_18695 at 4341.378 kb on - strand, within CA264_18695 at 4341.423 kb on + strand, within CA264_18695 at 4341.423 kb on + strand, within CA264_18695 at 4341.566 kb on + strand, within CA264_18695 at 4341.567 kb on - strand, within CA264_18695 at 4341.693 kb on + strand, within CA264_18695 at 4341.698 kb on + strand, within CA264_18695 at 4341.698 kb on + strand, within CA264_18695 at 4341.699 kb on - strand, within CA264_18695 at 4341.810 kb on + strand, within CA264_18695 at 4341.810 kb on + strand, within CA264_18695 at 4341.810 kb on + strand, within CA264_18695 at 4341.811 kb on - strand, within CA264_18695 at 4341.914 kb on + strand, within CA264_18695 at 4341.915 kb on - strand, within CA264_18695 at 4341.915 kb on - strand, within CA264_18695 at 4341.915 kb on - strand, within CA264_18695 at 4341.929 kb on + strand, within CA264_18695 at 4341.973 kb on + strand, within CA264_18695 at 4341.973 kb on + strand, within CA264_18695 at 4341.974 kb on - strand, within CA264_18695 at 4341.978 kb on + strand, within CA264_18695 at 4341.979 kb on - strand, within CA264_18695 at 4341.990 kb on + strand, within CA264_18695 at 4342.046 kb on + strand, within CA264_18695 at 4342.047 kb on - strand, within CA264_18695 at 4342.055 kb on + strand, within CA264_18695 at 4342.085 kb on + strand, within CA264_18695 at 4342.085 kb on + strand, within CA264_18695 at 4342.114 kb on + strand, within CA264_18695 at 4342.360 kb on + strand at 4342.384 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 4,340,334 - -0.3 4,340,334 - -0.1 4,340,347 - +0.1 4,340,443 - -2.6 4,341,189 + -0.1 4,341,209 - -0.4 4,341,209 - +0.3 4,341,270 + +0.3 4,341,310 - -0.8 4,341,327 + CA264_18695 0.11 -0.7 4,341,377 + CA264_18695 0.15 -1.0 4,341,378 - CA264_18695 0.15 -0.9 4,341,423 + CA264_18695 0.19 -0.7 4,341,423 + CA264_18695 0.19 +0.2 4,341,566 + CA264_18695 0.30 -0.4 4,341,567 - CA264_18695 0.30 +0.7 4,341,693 + CA264_18695 0.41 +2.2 4,341,698 + CA264_18695 0.41 -0.9 4,341,698 + CA264_18695 0.41 +0.4 4,341,699 - CA264_18695 0.41 -2.1 4,341,810 + CA264_18695 0.50 -1.3 4,341,810 + CA264_18695 0.50 -1.4 4,341,810 + CA264_18695 0.50 -0.7 4,341,811 - CA264_18695 0.50 -0.7 4,341,914 + CA264_18695 0.59 +1.4 4,341,915 - CA264_18695 0.59 -0.2 4,341,915 - CA264_18695 0.59 -1.1 4,341,915 - CA264_18695 0.59 -1.3 4,341,929 + CA264_18695 0.60 +1.0 4,341,973 + CA264_18695 0.64 -0.3 4,341,973 + CA264_18695 0.64 -0.1 4,341,974 - CA264_18695 0.64 -0.4 4,341,978 + CA264_18695 0.64 +0.0 4,341,979 - CA264_18695 0.64 -2.0 4,341,990 + CA264_18695 0.65 -1.0 4,342,046 + CA264_18695 0.70 -0.7 4,342,047 - CA264_18695 0.70 -0.4 4,342,055 + CA264_18695 0.70 +0.6 4,342,085 + CA264_18695 0.73 -0.6 4,342,085 + CA264_18695 0.73 -0.9 4,342,114 + CA264_18695 0.75 -0.6 4,342,360 + +0.7 4,342,384 + -0.6
Or see this region's nucleotide sequence