Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17565 and CA264_17570 are separated by 65 nucleotides CA264_17570 and CA264_17575 are separated by 124 nucleotides CA264_17575 and CA264_17580 are separated by 131 nucleotides
CA264_17565: CA264_17565 - hypothetical protein, at 4,093,839 to 4,094,039
_17565
CA264_17570: CA264_17570 - TIGR00266 family protein, at 4,094,105 to 4,094,872
_17570
CA264_17575: CA264_17575 - hypothetical protein, at 4,094,997 to 4,095,359
_17575
CA264_17580: CA264_17580 - glutamate--tRNA ligase, at 4,095,491 to 4,097,032
_17580
Position (kb)
4094
4095
4096 Strain fitness (log2 ratio)
-2
-1
0
1 at 4094.032 kb on - strand at 4094.050 kb on + strand at 4094.064 kb on + strand at 4094.065 kb on - strand at 4094.065 kb on - strand at 4094.126 kb on - strand at 4094.126 kb on - strand at 4094.269 kb on + strand, within CA264_17570 at 4094.269 kb on + strand, within CA264_17570 at 4094.289 kb on - strand, within CA264_17570 at 4094.426 kb on + strand, within CA264_17570 at 4094.428 kb on + strand, within CA264_17570 at 4094.428 kb on + strand, within CA264_17570 at 4094.641 kb on + strand, within CA264_17570 at 4094.760 kb on + strand, within CA264_17570 at 4094.760 kb on + strand, within CA264_17570 at 4094.848 kb on - strand at 4094.852 kb on + strand at 4094.879 kb on - strand at 4094.879 kb on - strand at 4094.879 kb on - strand at 4094.887 kb on + strand at 4094.888 kb on - strand at 4094.888 kb on - strand at 4094.895 kb on + strand at 4094.944 kb on + strand at 4094.972 kb on - strand at 4094.979 kb on - strand at 4094.979 kb on - strand at 4094.999 kb on - strand at 4095.135 kb on + strand, within CA264_17575 at 4095.136 kb on - strand, within CA264_17575 at 4095.142 kb on + strand, within CA264_17575 at 4095.143 kb on - strand, within CA264_17575 at 4095.143 kb on - strand, within CA264_17575 at 4095.193 kb on - strand, within CA264_17575 at 4095.201 kb on - strand, within CA264_17575 at 4095.240 kb on + strand, within CA264_17575 at 4095.240 kb on + strand, within CA264_17575 at 4095.241 kb on - strand, within CA264_17575 at 4095.378 kb on - strand at 4095.380 kb on - strand at 4095.383 kb on + strand at 4095.384 kb on - strand at 4095.390 kb on - strand at 4095.521 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 4,094,032 - -0.7 4,094,050 + -0.7 4,094,064 + -0.1 4,094,065 - -1.5 4,094,065 - -0.4 4,094,126 - +0.1 4,094,126 - -0.3 4,094,269 + CA264_17570 0.21 -0.6 4,094,269 + CA264_17570 0.21 +0.2 4,094,289 - CA264_17570 0.24 -1.0 4,094,426 + CA264_17570 0.42 -0.1 4,094,428 + CA264_17570 0.42 +0.1 4,094,428 + CA264_17570 0.42 -0.2 4,094,641 + CA264_17570 0.70 -0.7 4,094,760 + CA264_17570 0.85 -0.1 4,094,760 + CA264_17570 0.85 -1.1 4,094,848 - -0.1 4,094,852 + +0.2 4,094,879 - +1.0 4,094,879 - -1.1 4,094,879 - -0.4 4,094,887 + -0.7 4,094,888 - +0.2 4,094,888 - -0.5 4,094,895 + +0.6 4,094,944 + +0.8 4,094,972 - +0.5 4,094,979 - -0.7 4,094,979 - -0.8 4,094,999 - -0.4 4,095,135 + CA264_17575 0.38 -0.5 4,095,136 - CA264_17575 0.38 -1.1 4,095,142 + CA264_17575 0.40 +1.0 4,095,143 - CA264_17575 0.40 +0.3 4,095,143 - CA264_17575 0.40 +0.1 4,095,193 - CA264_17575 0.54 +0.6 4,095,201 - CA264_17575 0.56 +1.2 4,095,240 + CA264_17575 0.67 -1.8 4,095,240 + CA264_17575 0.67 -0.7 4,095,241 - CA264_17575 0.67 -0.0 4,095,378 - +0.3 4,095,380 - -0.7 4,095,383 + +0.5 4,095,384 - -0.0 4,095,390 - -0.3 4,095,521 - +0.2
Or see this region's nucleotide sequence