Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16810 and CA264_16815 are separated by 513 nucleotides CA264_16815 and CA264_16820 are separated by 272 nucleotides
CA264_16810: CA264_16810 - hypothetical protein, at 3,923,227 to 3,924,711
_16810
CA264_16815: CA264_16815 - hypothetical protein, at 3,925,225 to 3,925,629
_16815
CA264_16820: CA264_16820 - hypothetical protein, at 3,925,902 to 3,926,468
_16820
Position (kb)
3925
3926 Strain fitness (log2 ratio)
-1
0
1
2 at 3924.243 kb on - strand, within CA264_16810 at 3924.248 kb on - strand, within CA264_16810 at 3924.249 kb on + strand, within CA264_16810 at 3924.250 kb on - strand, within CA264_16810 at 3924.287 kb on + strand, within CA264_16810 at 3924.288 kb on - strand, within CA264_16810 at 3924.288 kb on - strand, within CA264_16810 at 3924.291 kb on + strand, within CA264_16810 at 3924.291 kb on + strand, within CA264_16810 at 3924.291 kb on + strand, within CA264_16810 at 3924.292 kb on - strand, within CA264_16810 at 3924.294 kb on + strand, within CA264_16810 at 3924.338 kb on + strand, within CA264_16810 at 3924.338 kb on + strand, within CA264_16810 at 3924.338 kb on + strand, within CA264_16810 at 3924.342 kb on - strand, within CA264_16810 at 3924.353 kb on + strand, within CA264_16810 at 3924.377 kb on + strand, within CA264_16810 at 3924.387 kb on - strand, within CA264_16810 at 3924.402 kb on + strand, within CA264_16810 at 3924.402 kb on + strand, within CA264_16810 at 3924.458 kb on + strand, within CA264_16810 at 3924.458 kb on + strand, within CA264_16810 at 3924.480 kb on + strand, within CA264_16810 at 3924.480 kb on + strand, within CA264_16810 at 3924.480 kb on + strand, within CA264_16810 at 3924.525 kb on - strand, within CA264_16810 at 3924.553 kb on - strand, within CA264_16810 at 3924.568 kb on + strand at 3924.568 kb on + strand at 3924.568 kb on + strand at 3924.568 kb on + strand at 3924.569 kb on - strand at 3924.569 kb on - strand at 3924.569 kb on - strand at 3924.569 kb on - strand at 3924.598 kb on + strand at 3924.611 kb on + strand at 3924.629 kb on + strand at 3924.630 kb on - strand at 3924.630 kb on - strand at 3924.674 kb on + strand at 3924.678 kb on + strand at 3924.678 kb on + strand at 3924.681 kb on + strand at 3924.682 kb on - strand at 3924.682 kb on - strand at 3924.713 kb on + strand at 3924.714 kb on - strand at 3924.726 kb on + strand at 3924.849 kb on - strand at 3924.868 kb on + strand at 3924.877 kb on - strand at 3924.905 kb on + strand at 3924.905 kb on + strand at 3924.907 kb on + strand at 3924.908 kb on - strand at 3924.908 kb on - strand at 3925.017 kb on - strand at 3925.019 kb on - strand at 3925.027 kb on - strand at 3925.058 kb on + strand at 3925.081 kb on + strand at 3925.092 kb on + strand at 3925.093 kb on - strand at 3925.114 kb on - strand at 3925.114 kb on - strand at 3925.114 kb on - strand at 3925.127 kb on + strand at 3925.138 kb on + strand at 3925.138 kb on + strand at 3925.149 kb on + strand at 3925.192 kb on + strand at 3925.298 kb on + strand, within CA264_16815 at 3925.298 kb on + strand, within CA264_16815 at 3925.298 kb on + strand, within CA264_16815 at 3925.299 kb on - strand, within CA264_16815 at 3925.299 kb on - strand, within CA264_16815 at 3925.299 kb on - strand, within CA264_16815 at 3925.299 kb on - strand, within CA264_16815 at 3925.406 kb on + strand, within CA264_16815 at 3925.406 kb on + strand, within CA264_16815 at 3925.406 kb on + strand, within CA264_16815 at 3925.441 kb on + strand, within CA264_16815 at 3925.441 kb on + strand, within CA264_16815 at 3925.518 kb on - strand, within CA264_16815 at 3925.620 kb on - strand at 3925.696 kb on + strand at 3925.696 kb on + strand at 3925.733 kb on - strand at 3925.903 kb on + strand at 3925.917 kb on - strand at 3925.924 kb on - strand at 3925.924 kb on - strand at 3925.928 kb on + strand at 3926.054 kb on - strand, within CA264_16820 at 3926.135 kb on + strand, within CA264_16820 at 3926.147 kb on + strand, within CA264_16820 at 3926.148 kb on - strand, within CA264_16820 at 3926.149 kb on + strand, within CA264_16820 at 3926.149 kb on + strand, within CA264_16820 at 3926.203 kb on + strand, within CA264_16820 at 3926.252 kb on - strand, within CA264_16820 at 3926.279 kb on + strand, within CA264_16820 at 3926.287 kb on + strand, within CA264_16820 at 3926.288 kb on - strand, within CA264_16820 at 3926.288 kb on - strand, within CA264_16820 at 3926.288 kb on - strand, within CA264_16820 at 3926.372 kb on + strand, within CA264_16820 at 3926.373 kb on - strand, within CA264_16820 at 3926.417 kb on + strand at 3926.507 kb on - strand at 3926.507 kb on - strand at 3926.521 kb on - strand at 3926.521 kb on - strand at 3926.566 kb on - strand at 3926.583 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 3,924,243 - CA264_16810 0.68 +1.5 3,924,248 - CA264_16810 0.69 -0.1 3,924,249 + CA264_16810 0.69 -0.1 3,924,250 - CA264_16810 0.69 -0.7 3,924,287 + CA264_16810 0.71 -0.5 3,924,288 - CA264_16810 0.71 -0.4 3,924,288 - CA264_16810 0.71 -0.8 3,924,291 + CA264_16810 0.72 -0.0 3,924,291 + CA264_16810 0.72 +0.2 3,924,291 + CA264_16810 0.72 -1.4 3,924,292 - CA264_16810 0.72 +0.3 3,924,294 + CA264_16810 0.72 +0.1 3,924,338 + CA264_16810 0.75 +0.2 3,924,338 + CA264_16810 0.75 +0.2 3,924,338 + CA264_16810 0.75 +0.3 3,924,342 - CA264_16810 0.75 -0.2 3,924,353 + CA264_16810 0.76 -0.4 3,924,377 + CA264_16810 0.77 +0.2 3,924,387 - CA264_16810 0.78 +0.4 3,924,402 + CA264_16810 0.79 -0.7 3,924,402 + CA264_16810 0.79 +0.0 3,924,458 + CA264_16810 0.83 +0.3 3,924,458 + CA264_16810 0.83 -0.3 3,924,480 + CA264_16810 0.84 -0.9 3,924,480 + CA264_16810 0.84 +0.3 3,924,480 + CA264_16810 0.84 +0.5 3,924,525 - CA264_16810 0.87 +0.0 3,924,553 - CA264_16810 0.89 -0.2 3,924,568 + +0.0 3,924,568 + +0.3 3,924,568 + +0.0 3,924,568 + -0.0 3,924,569 - -0.2 3,924,569 - -1.4 3,924,569 - -0.1 3,924,569 - -0.8 3,924,598 + -0.1 3,924,611 + +0.0 3,924,629 + -0.3 3,924,630 - +0.4 3,924,630 - +0.0 3,924,674 + -0.1 3,924,678 + -0.1 3,924,678 + +1.4 3,924,681 + -1.1 3,924,682 - +0.2 3,924,682 - +0.3 3,924,713 + -0.3 3,924,714 - +1.1 3,924,726 + -0.3 3,924,849 - +0.6 3,924,868 + +0.2 3,924,877 - +0.1 3,924,905 + -1.3 3,924,905 + -1.2 3,924,907 + -0.3 3,924,908 - +0.3 3,924,908 - -0.9 3,925,017 - -0.1 3,925,019 - +0.5 3,925,027 - +1.0 3,925,058 + -0.8 3,925,081 + +0.6 3,925,092 + -0.5 3,925,093 - -0.4 3,925,114 - -0.8 3,925,114 - -0.2 3,925,114 - -0.1 3,925,127 + -0.0 3,925,138 + -0.3 3,925,138 + +0.2 3,925,149 + +0.7 3,925,192 + +1.1 3,925,298 + CA264_16815 0.18 +0.0 3,925,298 + CA264_16815 0.18 +0.8 3,925,298 + CA264_16815 0.18 -0.2 3,925,299 - CA264_16815 0.18 +0.3 3,925,299 - CA264_16815 0.18 +0.3 3,925,299 - CA264_16815 0.18 +0.1 3,925,299 - CA264_16815 0.18 +1.5 3,925,406 + CA264_16815 0.45 +0.3 3,925,406 + CA264_16815 0.45 +0.7 3,925,406 + CA264_16815 0.45 -0.1 3,925,441 + CA264_16815 0.53 -0.1 3,925,441 + CA264_16815 0.53 +0.1 3,925,518 - CA264_16815 0.72 -0.5 3,925,620 - -0.4 3,925,696 + -0.3 3,925,696 + +0.2 3,925,733 - +0.0 3,925,903 + -0.5 3,925,917 - -0.4 3,925,924 - +0.8 3,925,924 - +0.0 3,925,928 + +0.3 3,926,054 - CA264_16820 0.27 +0.0 3,926,135 + CA264_16820 0.41 +0.0 3,926,147 + CA264_16820 0.43 +0.9 3,926,148 - CA264_16820 0.43 -0.0 3,926,149 + CA264_16820 0.44 +0.5 3,926,149 + CA264_16820 0.44 +0.8 3,926,203 + CA264_16820 0.53 +0.1 3,926,252 - CA264_16820 0.62 +0.4 3,926,279 + CA264_16820 0.66 -0.4 3,926,287 + CA264_16820 0.68 +0.5 3,926,288 - CA264_16820 0.68 -0.6 3,926,288 - CA264_16820 0.68 -0.1 3,926,288 - CA264_16820 0.68 +1.8 3,926,372 + CA264_16820 0.83 -0.3 3,926,373 - CA264_16820 0.83 +0.3 3,926,417 + -0.1 3,926,507 - -0.4 3,926,507 - +0.8 3,926,521 - -0.4 3,926,521 - +0.4 3,926,566 - +1.3 3,926,583 + -0.0
Or see this region's nucleotide sequence