Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15570 and CA264_15575 are separated by 292 nucleotides CA264_15575 and CA264_15580 are separated by 110 nucleotides CA264_15580 and CA264_15585 are separated by 80 nucleotides
CA264_15570: CA264_15570 - hypothetical protein, at 3,642,431 to 3,643,879
_15570
CA264_15575: CA264_15575 - hypothetical protein, at 3,644,172 to 3,644,435
_15575
CA264_15580: CA264_15580 - phospholipase, at 3,644,546 to 3,645,169
_15580
CA264_15585: CA264_15585 - short-chain dehydrogenase, at 3,645,250 to 3,646,050
_15585
Position (kb)
3644
3645
3646 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3643.647 kb on - strand, within CA264_15570 at 3643.701 kb on + strand, within CA264_15570 at 3643.701 kb on + strand, within CA264_15570 at 3643.702 kb on - strand, within CA264_15570 at 3643.791 kb on + strand at 3643.792 kb on - strand at 3643.792 kb on - strand at 3643.793 kb on + strand at 3643.793 kb on + strand at 3643.797 kb on + strand at 3643.797 kb on + strand at 3643.797 kb on + strand at 3643.838 kb on - strand at 3643.974 kb on + strand at 3643.975 kb on - strand at 3644.082 kb on + strand at 3644.093 kb on - strand at 3644.124 kb on + strand at 3644.124 kb on + strand at 3644.125 kb on - strand at 3644.142 kb on + strand at 3644.142 kb on + strand at 3644.143 kb on - strand at 3644.144 kb on + strand at 3644.144 kb on + strand at 3644.144 kb on + strand at 3644.144 kb on + strand at 3644.144 kb on + strand at 3644.144 kb on + strand at 3644.145 kb on - strand at 3644.145 kb on - strand at 3644.145 kb on - strand at 3644.145 kb on - strand at 3644.145 kb on - strand at 3644.149 kb on + strand at 3644.149 kb on + strand at 3644.149 kb on + strand at 3644.150 kb on - strand at 3644.150 kb on - strand at 3644.150 kb on - strand at 3644.163 kb on + strand at 3644.164 kb on - strand at 3644.164 kb on - strand at 3644.167 kb on + strand at 3644.167 kb on + strand at 3644.167 kb on + strand at 3644.168 kb on - strand at 3644.168 kb on - strand at 3644.168 kb on - strand at 3644.171 kb on + strand at 3644.171 kb on + strand at 3644.172 kb on - strand at 3644.172 kb on - strand at 3644.188 kb on + strand at 3644.201 kb on - strand, within CA264_15575 at 3644.236 kb on + strand, within CA264_15575 at 3644.283 kb on + strand, within CA264_15575 at 3644.300 kb on - strand, within CA264_15575 at 3644.306 kb on + strand, within CA264_15575 at 3644.306 kb on + strand, within CA264_15575 at 3644.322 kb on - strand, within CA264_15575 at 3644.322 kb on - strand, within CA264_15575 at 3644.332 kb on + strand, within CA264_15575 at 3644.444 kb on + strand at 3644.502 kb on + strand at 3644.555 kb on + strand at 3644.571 kb on - strand at 3644.571 kb on - strand at 3644.687 kb on - strand, within CA264_15580 at 3644.687 kb on - strand, within CA264_15580 at 3644.687 kb on - strand, within CA264_15580 at 3644.691 kb on - strand, within CA264_15580 at 3644.691 kb on - strand, within CA264_15580 at 3644.805 kb on + strand, within CA264_15580 at 3644.842 kb on - strand, within CA264_15580 at 3644.905 kb on - strand, within CA264_15580 at 3644.931 kb on + strand, within CA264_15580 at 3644.997 kb on + strand, within CA264_15580 at 3644.997 kb on + strand, within CA264_15580 at 3644.997 kb on + strand, within CA264_15580 at 3645.061 kb on - strand, within CA264_15580 at 3645.066 kb on + strand, within CA264_15580 at 3645.067 kb on - strand, within CA264_15580 at 3645.105 kb on - strand, within CA264_15580 at 3645.122 kb on + strand at 3645.122 kb on + strand at 3645.122 kb on + strand at 3645.123 kb on - strand at 3645.132 kb on + strand at 3645.238 kb on - strand at 3645.307 kb on + strand at 3645.359 kb on - strand, within CA264_15585 at 3645.561 kb on - strand, within CA264_15585 at 3645.561 kb on - strand, within CA264_15585 at 3645.590 kb on + strand, within CA264_15585 at 3645.591 kb on - strand, within CA264_15585 at 3645.591 kb on - strand, within CA264_15585 at 3645.875 kb on + strand, within CA264_15585 at 3645.877 kb on + strand, within CA264_15585 at 3645.878 kb on - strand, within CA264_15585 at 3645.878 kb on - strand, within CA264_15585 at 3645.882 kb on + strand, within CA264_15585 at 3645.883 kb on - strand, within CA264_15585 at 3645.883 kb on - strand, within CA264_15585 at 3645.884 kb on + strand, within CA264_15585 at 3645.884 kb on + strand, within CA264_15585 at 3645.885 kb on - strand, within CA264_15585 at 3645.943 kb on + strand, within CA264_15585 at 3645.943 kb on + strand, within CA264_15585 at 3646.026 kb on - strand at 3646.086 kb on + strand at 3646.087 kb on - strand at 3646.087 kb on - strand at 3646.088 kb on + strand at 3646.088 kb on + strand at 3646.089 kb on - strand at 3646.089 kb on - strand at 3646.102 kb on + strand at 3646.139 kb on - strand at 3646.140 kb on + strand at 3646.141 kb on - strand at 3646.144 kb on + strand at 3646.144 kb on + strand at 3646.144 kb on + strand at 3646.144 kb on + strand at 3646.145 kb on - strand at 3646.168 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 3,643,647 - CA264_15570 0.84 -0.8 3,643,701 + CA264_15570 0.88 +1.0 3,643,701 + CA264_15570 0.88 +0.0 3,643,702 - CA264_15570 0.88 -0.8 3,643,791 + -0.7 3,643,792 - -0.0 3,643,792 - -0.2 3,643,793 + -0.4 3,643,793 + +0.1 3,643,797 + -0.2 3,643,797 + -0.8 3,643,797 + -0.4 3,643,838 - +0.3 3,643,974 + -0.1 3,643,975 - -0.3 3,644,082 + +0.3 3,644,093 - -0.0 3,644,124 + +0.3 3,644,124 + +0.3 3,644,125 - -1.0 3,644,142 + -0.0 3,644,142 + -0.2 3,644,143 - -0.0 3,644,144 + -0.1 3,644,144 + +1.0 3,644,144 + +0.9 3,644,144 + -0.7 3,644,144 + -0.1 3,644,144 + +1.1 3,644,145 - -0.3 3,644,145 - -1.5 3,644,145 - -0.1 3,644,145 - -0.5 3,644,145 - -0.7 3,644,149 + -0.4 3,644,149 + -1.5 3,644,149 + -0.1 3,644,150 - +0.8 3,644,150 - -0.5 3,644,150 - -0.9 3,644,163 + -0.3 3,644,164 - +0.1 3,644,164 - +0.8 3,644,167 + +1.0 3,644,167 + -0.7 3,644,167 + -0.1 3,644,168 - +1.2 3,644,168 - +0.7 3,644,168 - +0.3 3,644,171 + +0.1 3,644,171 + +2.7 3,644,172 - +0.6 3,644,172 - +1.7 3,644,188 + -0.2 3,644,201 - CA264_15575 0.11 -0.3 3,644,236 + CA264_15575 0.24 -1.9 3,644,283 + CA264_15575 0.42 +1.8 3,644,300 - CA264_15575 0.48 -1.1 3,644,306 + CA264_15575 0.51 +0.1 3,644,306 + CA264_15575 0.51 -0.6 3,644,322 - CA264_15575 0.57 -0.2 3,644,322 - CA264_15575 0.57 +0.3 3,644,332 + CA264_15575 0.61 -1.1 3,644,444 + -0.6 3,644,502 + -0.7 3,644,555 + +1.1 3,644,571 - -0.4 3,644,571 - +0.7 3,644,687 - CA264_15580 0.23 -1.2 3,644,687 - CA264_15580 0.23 -0.3 3,644,687 - CA264_15580 0.23 -0.7 3,644,691 - CA264_15580 0.23 +0.2 3,644,691 - CA264_15580 0.23 -0.1 3,644,805 + CA264_15580 0.42 -0.7 3,644,842 - CA264_15580 0.47 -0.3 3,644,905 - CA264_15580 0.58 -0.4 3,644,931 + CA264_15580 0.62 -0.1 3,644,997 + CA264_15580 0.72 +0.2 3,644,997 + CA264_15580 0.72 -0.1 3,644,997 + CA264_15580 0.72 +0.1 3,645,061 - CA264_15580 0.83 -1.2 3,645,066 + CA264_15580 0.83 -1.4 3,645,067 - CA264_15580 0.83 -0.3 3,645,105 - CA264_15580 0.90 -0.4 3,645,122 + +0.5 3,645,122 + +0.3 3,645,122 + +0.0 3,645,123 - +0.7 3,645,132 + -0.2 3,645,238 - +0.1 3,645,307 + -0.6 3,645,359 - CA264_15585 0.14 +0.1 3,645,561 - CA264_15585 0.39 +0.2 3,645,561 - CA264_15585 0.39 +0.5 3,645,590 + CA264_15585 0.42 -0.4 3,645,591 - CA264_15585 0.43 +0.0 3,645,591 - CA264_15585 0.43 -0.3 3,645,875 + CA264_15585 0.78 -0.1 3,645,877 + CA264_15585 0.78 +0.1 3,645,878 - CA264_15585 0.78 +1.2 3,645,878 - CA264_15585 0.78 +0.8 3,645,882 + CA264_15585 0.79 -0.8 3,645,883 - CA264_15585 0.79 +0.2 3,645,883 - CA264_15585 0.79 -1.2 3,645,884 + CA264_15585 0.79 -0.0 3,645,884 + CA264_15585 0.79 +0.0 3,645,885 - CA264_15585 0.79 -0.2 3,645,943 + CA264_15585 0.87 -0.3 3,645,943 + CA264_15585 0.87 -1.1 3,646,026 - +0.1 3,646,086 + -0.1 3,646,087 - +1.2 3,646,087 - -0.9 3,646,088 + -1.3 3,646,088 + -0.1 3,646,089 - +0.8 3,646,089 - -0.1 3,646,102 + +0.7 3,646,139 - -0.0 3,646,140 + +0.6 3,646,141 - -0.4 3,646,144 + -0.3 3,646,144 + -0.3 3,646,144 + +0.4 3,646,144 + +0.1 3,646,145 - +0.1 3,646,168 + +0.7
Or see this region's nucleotide sequence