Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15185 and CA264_15190 are separated by 121 nucleotides CA264_15190 and CA264_15195 overlap by 11 nucleotides CA264_15195 and CA264_15200 are separated by 45 nucleotides
CA264_15185: CA264_15185 - hypothetical protein, at 3,558,358 to 3,559,194
_15185
CA264_15190: CA264_15190 - hypothetical protein, at 3,559,316 to 3,559,573
_15190
CA264_15195: CA264_15195 - phosphate ABC transporter substrate-binding protein, PhoT family, at 3,559,563 to 3,560,504
_15195
CA264_15200: CA264_15200 - hypothetical protein, at 3,560,550 to 3,562,193
_15200
Position (kb)
3559
3560
3561 Strain fitness (log2 ratio)
-2
-1
0
1 at 3558.571 kb on + strand, within CA264_15185 at 3558.571 kb on + strand, within CA264_15185 at 3558.571 kb on + strand, within CA264_15185 at 3558.571 kb on + strand, within CA264_15185 at 3558.572 kb on - strand, within CA264_15185 at 3558.572 kb on - strand, within CA264_15185 at 3558.590 kb on - strand, within CA264_15185 at 3558.606 kb on + strand, within CA264_15185 at 3558.892 kb on + strand, within CA264_15185 at 3558.892 kb on + strand, within CA264_15185 at 3558.892 kb on + strand, within CA264_15185 at 3558.893 kb on - strand, within CA264_15185 at 3559.198 kb on + strand at 3559.198 kb on + strand at 3559.321 kb on + strand at 3559.322 kb on - strand at 3559.322 kb on - strand at 3559.461 kb on + strand, within CA264_15190 at 3559.478 kb on + strand, within CA264_15190 at 3559.479 kb on - strand, within CA264_15190 at 3559.500 kb on + strand, within CA264_15190 at 3559.505 kb on + strand, within CA264_15190 at 3559.506 kb on - strand, within CA264_15190 at 3559.533 kb on - strand, within CA264_15190 at 3559.533 kb on - strand, within CA264_15190 at 3559.562 kb on + strand at 3559.563 kb on - strand at 3559.613 kb on - strand at 3559.735 kb on - strand, within CA264_15195 at 3559.916 kb on + strand, within CA264_15195 at 3560.102 kb on + strand, within CA264_15195 at 3560.102 kb on + strand, within CA264_15195 at 3560.103 kb on - strand, within CA264_15195 at 3560.103 kb on - strand, within CA264_15195 at 3560.103 kb on - strand, within CA264_15195 at 3560.103 kb on - strand, within CA264_15195 at 3560.129 kb on + strand, within CA264_15195 at 3560.154 kb on + strand, within CA264_15195 at 3560.155 kb on - strand, within CA264_15195 at 3560.320 kb on - strand, within CA264_15195 at 3560.358 kb on + strand, within CA264_15195 at 3560.359 kb on - strand, within CA264_15195 at 3560.409 kb on + strand, within CA264_15195 at 3560.410 kb on - strand at 3560.508 kb on + strand at 3560.515 kb on + strand at 3560.568 kb on + strand at 3560.676 kb on - strand at 3560.679 kb on + strand at 3560.679 kb on + strand at 3560.680 kb on - strand at 3560.680 kb on - strand at 3560.682 kb on - strand at 3560.697 kb on - strand at 3560.739 kb on - strand, within CA264_15200 at 3560.926 kb on + strand, within CA264_15200 at 3560.949 kb on + strand, within CA264_15200 at 3561.050 kb on - strand, within CA264_15200 at 3561.135 kb on + strand, within CA264_15200 at 3561.147 kb on + strand, within CA264_15200 at 3561.169 kb on - strand, within CA264_15200 at 3561.270 kb on + strand, within CA264_15200 at 3561.271 kb on - strand, within CA264_15200 at 3561.274 kb on - strand, within CA264_15200 at 3561.323 kb on - strand, within CA264_15200
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 3,558,571 + CA264_15185 0.25 -0.7 3,558,571 + CA264_15185 0.25 +0.2 3,558,571 + CA264_15185 0.25 +0.3 3,558,571 + CA264_15185 0.25 +1.5 3,558,572 - CA264_15185 0.26 -1.3 3,558,572 - CA264_15185 0.26 -0.2 3,558,590 - CA264_15185 0.28 +0.4 3,558,606 + CA264_15185 0.30 -0.0 3,558,892 + CA264_15185 0.64 -1.1 3,558,892 + CA264_15185 0.64 +0.3 3,558,892 + CA264_15185 0.64 +0.3 3,558,893 - CA264_15185 0.64 -0.2 3,559,198 + -0.2 3,559,198 + -0.2 3,559,321 + -0.6 3,559,322 - -0.3 3,559,322 - -0.4 3,559,461 + CA264_15190 0.56 +0.0 3,559,478 + CA264_15190 0.63 +0.1 3,559,479 - CA264_15190 0.63 -0.4 3,559,500 + CA264_15190 0.71 +1.2 3,559,505 + CA264_15190 0.73 -0.6 3,559,506 - CA264_15190 0.74 +0.0 3,559,533 - CA264_15190 0.84 +0.1 3,559,533 - CA264_15190 0.84 +0.8 3,559,562 + +0.3 3,559,563 - -0.3 3,559,613 - +0.2 3,559,735 - CA264_15195 0.18 -0.3 3,559,916 + CA264_15195 0.37 +0.1 3,560,102 + CA264_15195 0.57 +0.3 3,560,102 + CA264_15195 0.57 -0.1 3,560,103 - CA264_15195 0.57 -0.8 3,560,103 - CA264_15195 0.57 -2.3 3,560,103 - CA264_15195 0.57 +0.6 3,560,103 - CA264_15195 0.57 -0.4 3,560,129 + CA264_15195 0.60 -1.0 3,560,154 + CA264_15195 0.63 +1.1 3,560,155 - CA264_15195 0.63 -1.1 3,560,320 - CA264_15195 0.80 -2.1 3,560,358 + CA264_15195 0.84 -0.1 3,560,359 - CA264_15195 0.85 -0.6 3,560,409 + CA264_15195 0.90 -1.2 3,560,410 - -0.6 3,560,508 + -0.3 3,560,515 + -0.0 3,560,568 + -0.9 3,560,676 - -1.8 3,560,679 + -0.1 3,560,679 + -0.7 3,560,680 - -0.3 3,560,680 - +0.3 3,560,682 - -0.3 3,560,697 - -0.7 3,560,739 - CA264_15200 0.11 -0.6 3,560,926 + CA264_15200 0.23 +0.0 3,560,949 + CA264_15200 0.24 +0.2 3,561,050 - CA264_15200 0.30 -0.6 3,561,135 + CA264_15200 0.36 -0.1 3,561,147 + CA264_15200 0.36 +0.3 3,561,169 - CA264_15200 0.38 +1.4 3,561,270 + CA264_15200 0.44 -0.3 3,561,271 - CA264_15200 0.44 +0.2 3,561,274 - CA264_15200 0.44 -0.1 3,561,323 - CA264_15200 0.47 -0.1
Or see this region's nucleotide sequence