Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14555 and CA264_14560 are separated by 59 nucleotides CA264_14560 and CA264_14565 are separated by 340 nucleotides CA264_14565 and CA264_14570 are separated by 96 nucleotides
CA264_14555: CA264_14555 - glycine cleavage system protein H, at 3,421,623 to 3,422,003
_14555
CA264_14560: CA264_14560 - VanZ family protein, at 3,422,063 to 3,422,395
_14560
CA264_14565: CA264_14565 - hypothetical protein, at 3,422,736 to 3,424,028
_14565
CA264_14570: CA264_14570 - T9SS C-terminal target domain-containing protein, at 3,424,125 to 3,426,755
_14570
Position (kb)
3422
3423
3424
3425 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3422.016 kb on + strand at 3422.041 kb on - strand at 3422.045 kb on - strand at 3422.207 kb on - strand, within CA264_14560 at 3422.251 kb on + strand, within CA264_14560 at 3422.331 kb on + strand, within CA264_14560 at 3422.332 kb on - strand, within CA264_14560 at 3422.374 kb on + strand at 3422.384 kb on + strand at 3422.385 kb on - strand at 3422.417 kb on + strand at 3422.420 kb on - strand at 3422.470 kb on - strand at 3422.480 kb on - strand at 3422.480 kb on - strand at 3422.570 kb on + strand at 3422.571 kb on - strand at 3422.606 kb on + strand at 3422.606 kb on + strand at 3422.607 kb on - strand at 3422.642 kb on + strand at 3422.643 kb on - strand at 3422.648 kb on - strand at 3422.648 kb on - strand at 3422.648 kb on - strand at 3422.649 kb on + strand at 3422.650 kb on - strand at 3422.650 kb on - strand at 3422.724 kb on + strand at 3422.730 kb on - strand at 3422.865 kb on + strand at 3422.866 kb on - strand, within CA264_14565 at 3422.867 kb on + strand, within CA264_14565 at 3422.867 kb on + strand, within CA264_14565 at 3422.868 kb on - strand, within CA264_14565 at 3422.898 kb on + strand, within CA264_14565 at 3422.899 kb on - strand, within CA264_14565 at 3422.949 kb on + strand, within CA264_14565 at 3422.986 kb on + strand, within CA264_14565 at 3422.986 kb on + strand, within CA264_14565 at 3423.001 kb on + strand, within CA264_14565 at 3423.099 kb on - strand, within CA264_14565 at 3423.172 kb on - strand, within CA264_14565 at 3423.217 kb on - strand, within CA264_14565 at 3423.254 kb on - strand, within CA264_14565 at 3423.284 kb on - strand, within CA264_14565 at 3423.302 kb on + strand, within CA264_14565 at 3423.302 kb on + strand, within CA264_14565 at 3423.303 kb on - strand, within CA264_14565 at 3423.303 kb on - strand, within CA264_14565 at 3423.303 kb on - strand, within CA264_14565 at 3423.452 kb on - strand, within CA264_14565 at 3423.496 kb on + strand, within CA264_14565 at 3423.496 kb on + strand, within CA264_14565 at 3423.499 kb on - strand, within CA264_14565 at 3423.499 kb on - strand, within CA264_14565 at 3423.561 kb on + strand, within CA264_14565 at 3423.602 kb on + strand, within CA264_14565 at 3423.634 kb on + strand, within CA264_14565 at 3423.645 kb on + strand, within CA264_14565 at 3423.695 kb on + strand, within CA264_14565 at 3423.751 kb on + strand, within CA264_14565 at 3423.850 kb on - strand, within CA264_14565 at 3423.930 kb on + strand at 3424.054 kb on + strand at 3424.055 kb on - strand at 3424.056 kb on + strand at 3424.056 kb on + strand at 3424.057 kb on - strand at 3424.077 kb on - strand at 3424.098 kb on + strand at 3424.099 kb on - strand at 3424.099 kb on - strand at 3424.099 kb on - strand at 3424.099 kb on - strand at 3424.108 kb on - strand at 3424.237 kb on + strand at 3424.316 kb on - strand at 3424.327 kb on + strand at 3424.411 kb on + strand, within CA264_14570 at 3424.411 kb on + strand, within CA264_14570 at 3424.411 kb on + strand, within CA264_14570 at 3424.440 kb on + strand, within CA264_14570 at 3424.441 kb on - strand, within CA264_14570 at 3424.444 kb on + strand, within CA264_14570 at 3424.445 kb on - strand, within CA264_14570 at 3424.445 kb on - strand, within CA264_14570 at 3424.445 kb on - strand, within CA264_14570 at 3424.523 kb on - strand, within CA264_14570 at 3424.564 kb on + strand, within CA264_14570 at 3424.647 kb on + strand, within CA264_14570 at 3424.739 kb on + strand, within CA264_14570 at 3424.740 kb on - strand, within CA264_14570 at 3424.821 kb on + strand, within CA264_14570 at 3424.822 kb on - strand, within CA264_14570 at 3424.842 kb on + strand, within CA264_14570 at 3424.842 kb on + strand, within CA264_14570 at 3424.843 kb on - strand, within CA264_14570 at 3424.843 kb on - strand, within CA264_14570 at 3424.963 kb on + strand, within CA264_14570 at 3424.963 kb on + strand, within CA264_14570
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 3,422,016 + -0.2 3,422,041 - -0.6 3,422,045 - -0.2 3,422,207 - CA264_14560 0.43 +1.7 3,422,251 + CA264_14560 0.56 +3.2 3,422,331 + CA264_14560 0.80 -0.7 3,422,332 - CA264_14560 0.81 +0.6 3,422,374 + -0.5 3,422,384 + -0.2 3,422,385 - -0.2 3,422,417 + +0.3 3,422,420 - +0.0 3,422,470 - +0.1 3,422,480 - -0.3 3,422,480 - +1.4 3,422,570 + +0.2 3,422,571 - +0.2 3,422,606 + -0.3 3,422,606 + +0.3 3,422,607 - -0.7 3,422,642 + +0.4 3,422,643 - +0.3 3,422,648 - +0.3 3,422,648 - -0.7 3,422,648 - +0.1 3,422,649 + +0.4 3,422,650 - -0.5 3,422,650 - -1.1 3,422,724 + +0.3 3,422,730 - -0.6 3,422,865 + -0.1 3,422,866 - CA264_14565 0.10 +0.1 3,422,867 + CA264_14565 0.10 +1.2 3,422,867 + CA264_14565 0.10 -1.3 3,422,868 - CA264_14565 0.10 +0.4 3,422,898 + CA264_14565 0.13 +0.1 3,422,899 - CA264_14565 0.13 +0.3 3,422,949 + CA264_14565 0.16 -0.1 3,422,986 + CA264_14565 0.19 +1.3 3,422,986 + CA264_14565 0.19 +0.6 3,423,001 + CA264_14565 0.20 -0.3 3,423,099 - CA264_14565 0.28 +0.5 3,423,172 - CA264_14565 0.34 -0.7 3,423,217 - CA264_14565 0.37 -0.7 3,423,254 - CA264_14565 0.40 +1.1 3,423,284 - CA264_14565 0.42 -0.0 3,423,302 + CA264_14565 0.44 +0.7 3,423,302 + CA264_14565 0.44 +0.3 3,423,303 - CA264_14565 0.44 -1.3 3,423,303 - CA264_14565 0.44 +0.6 3,423,303 - CA264_14565 0.44 +0.5 3,423,452 - CA264_14565 0.55 +0.8 3,423,496 + CA264_14565 0.59 +0.4 3,423,496 + CA264_14565 0.59 -0.7 3,423,499 - CA264_14565 0.59 -0.1 3,423,499 - CA264_14565 0.59 -1.3 3,423,561 + CA264_14565 0.64 +0.3 3,423,602 + CA264_14565 0.67 +0.1 3,423,634 + CA264_14565 0.69 -0.1 3,423,645 + CA264_14565 0.70 +0.2 3,423,695 + CA264_14565 0.74 -0.0 3,423,751 + CA264_14565 0.78 +0.0 3,423,850 - CA264_14565 0.86 +0.9 3,423,930 + -1.3 3,424,054 + -0.4 3,424,055 - -0.7 3,424,056 + +0.8 3,424,056 + +0.0 3,424,057 - -0.1 3,424,077 - +0.6 3,424,098 + +1.3 3,424,099 - -0.7 3,424,099 - +0.1 3,424,099 - -0.1 3,424,099 - -0.2 3,424,108 - +0.5 3,424,237 + -0.2 3,424,316 - -0.1 3,424,327 + +0.0 3,424,411 + CA264_14570 0.11 -0.6 3,424,411 + CA264_14570 0.11 -0.1 3,424,411 + CA264_14570 0.11 -0.3 3,424,440 + CA264_14570 0.12 -0.0 3,424,441 - CA264_14570 0.12 -1.3 3,424,444 + CA264_14570 0.12 +0.4 3,424,445 - CA264_14570 0.12 -0.1 3,424,445 - CA264_14570 0.12 +0.1 3,424,445 - CA264_14570 0.12 -1.6 3,424,523 - CA264_14570 0.15 +0.3 3,424,564 + CA264_14570 0.17 -0.2 3,424,647 + CA264_14570 0.20 -2.3 3,424,739 + CA264_14570 0.23 +1.6 3,424,740 - CA264_14570 0.23 -0.8 3,424,821 + CA264_14570 0.26 +0.6 3,424,822 - CA264_14570 0.26 -0.1 3,424,842 + CA264_14570 0.27 -0.5 3,424,842 + CA264_14570 0.27 +1.2 3,424,843 - CA264_14570 0.27 -0.4 3,424,843 - CA264_14570 0.27 +0.3 3,424,963 + CA264_14570 0.32 -0.6 3,424,963 + CA264_14570 0.32 -1.2
Or see this region's nucleotide sequence