Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14550 and CA264_14555 are separated by 60 nucleotides CA264_14555 and CA264_14560 are separated by 59 nucleotides CA264_14560 and CA264_14565 are separated by 340 nucleotides
CA264_14550: CA264_14550 - cell surface protein SprA, at 3,414,435 to 3,421,562
_14550
CA264_14555: CA264_14555 - glycine cleavage system protein H, at 3,421,623 to 3,422,003
_14555
CA264_14560: CA264_14560 - VanZ family protein, at 3,422,063 to 3,422,395
_14560
CA264_14565: CA264_14565 - hypothetical protein, at 3,422,736 to 3,424,028
_14565
Position (kb)
3422
3423 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3421.124 kb on + strand at 3421.140 kb on + strand at 3421.142 kb on + strand at 3421.142 kb on + strand at 3421.143 kb on - strand at 3421.143 kb on - strand at 3421.210 kb on - strand at 3421.210 kb on - strand at 3421.249 kb on + strand at 3421.295 kb on - strand at 3421.434 kb on + strand at 3421.434 kb on + strand at 3421.434 kb on + strand at 3421.434 kb on + strand at 3421.435 kb on - strand at 3421.435 kb on - strand at 3421.438 kb on + strand at 3421.468 kb on - strand at 3421.468 kb on - strand at 3421.601 kb on + strand at 3421.602 kb on - strand at 3421.602 kb on - strand at 3421.613 kb on + strand at 3422.016 kb on + strand at 3422.041 kb on - strand at 3422.045 kb on - strand at 3422.207 kb on - strand, within CA264_14560 at 3422.251 kb on + strand, within CA264_14560 at 3422.331 kb on + strand, within CA264_14560 at 3422.332 kb on - strand, within CA264_14560 at 3422.374 kb on + strand at 3422.384 kb on + strand at 3422.385 kb on - strand at 3422.417 kb on + strand at 3422.420 kb on - strand at 3422.470 kb on - strand at 3422.480 kb on - strand at 3422.480 kb on - strand at 3422.570 kb on + strand at 3422.571 kb on - strand at 3422.606 kb on + strand at 3422.606 kb on + strand at 3422.607 kb on - strand at 3422.642 kb on + strand at 3422.643 kb on - strand at 3422.648 kb on - strand at 3422.648 kb on - strand at 3422.648 kb on - strand at 3422.649 kb on + strand at 3422.650 kb on - strand at 3422.650 kb on - strand at 3422.724 kb on + strand at 3422.730 kb on - strand at 3422.865 kb on + strand at 3422.866 kb on - strand, within CA264_14565 at 3422.867 kb on + strand, within CA264_14565 at 3422.867 kb on + strand, within CA264_14565 at 3422.868 kb on - strand, within CA264_14565 at 3422.898 kb on + strand, within CA264_14565 at 3422.899 kb on - strand, within CA264_14565 at 3422.949 kb on + strand, within CA264_14565 at 3422.986 kb on + strand, within CA264_14565 at 3422.986 kb on + strand, within CA264_14565 at 3423.001 kb on + strand, within CA264_14565 at 3423.099 kb on - strand, within CA264_14565 at 3423.172 kb on - strand, within CA264_14565 at 3423.217 kb on - strand, within CA264_14565 at 3423.254 kb on - strand, within CA264_14565 at 3423.284 kb on - strand, within CA264_14565 at 3423.302 kb on + strand, within CA264_14565 at 3423.302 kb on + strand, within CA264_14565 at 3423.303 kb on - strand, within CA264_14565 at 3423.303 kb on - strand, within CA264_14565 at 3423.303 kb on - strand, within CA264_14565
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 3,421,124 + -0.9 3,421,140 + -0.2 3,421,142 + -0.7 3,421,142 + -0.7 3,421,143 - -0.1 3,421,143 - -0.7 3,421,210 - +0.2 3,421,210 - -0.2 3,421,249 + -0.1 3,421,295 - -0.2 3,421,434 + -2.0 3,421,434 + -0.3 3,421,434 + -0.9 3,421,434 + -0.9 3,421,435 - -0.8 3,421,435 - -0.9 3,421,438 + -1.4 3,421,468 - -0.4 3,421,468 - -0.5 3,421,601 + -0.5 3,421,602 - +0.3 3,421,602 - +0.5 3,421,613 + +0.3 3,422,016 + -0.2 3,422,041 - -0.6 3,422,045 - -0.2 3,422,207 - CA264_14560 0.43 +1.7 3,422,251 + CA264_14560 0.56 +3.2 3,422,331 + CA264_14560 0.80 -0.7 3,422,332 - CA264_14560 0.81 +0.6 3,422,374 + -0.5 3,422,384 + -0.2 3,422,385 - -0.2 3,422,417 + +0.3 3,422,420 - +0.0 3,422,470 - +0.1 3,422,480 - -0.3 3,422,480 - +1.4 3,422,570 + +0.2 3,422,571 - +0.2 3,422,606 + -0.3 3,422,606 + +0.3 3,422,607 - -0.7 3,422,642 + +0.4 3,422,643 - +0.3 3,422,648 - +0.3 3,422,648 - -0.7 3,422,648 - +0.1 3,422,649 + +0.4 3,422,650 - -0.5 3,422,650 - -1.1 3,422,724 + +0.3 3,422,730 - -0.6 3,422,865 + -0.1 3,422,866 - CA264_14565 0.10 +0.1 3,422,867 + CA264_14565 0.10 +1.2 3,422,867 + CA264_14565 0.10 -1.3 3,422,868 - CA264_14565 0.10 +0.4 3,422,898 + CA264_14565 0.13 +0.1 3,422,899 - CA264_14565 0.13 +0.3 3,422,949 + CA264_14565 0.16 -0.1 3,422,986 + CA264_14565 0.19 +1.3 3,422,986 + CA264_14565 0.19 +0.6 3,423,001 + CA264_14565 0.20 -0.3 3,423,099 - CA264_14565 0.28 +0.5 3,423,172 - CA264_14565 0.34 -0.7 3,423,217 - CA264_14565 0.37 -0.7 3,423,254 - CA264_14565 0.40 +1.1 3,423,284 - CA264_14565 0.42 -0.0 3,423,302 + CA264_14565 0.44 +0.7 3,423,302 + CA264_14565 0.44 +0.3 3,423,303 - CA264_14565 0.44 -1.3 3,423,303 - CA264_14565 0.44 +0.6 3,423,303 - CA264_14565 0.44 +0.5
Or see this region's nucleotide sequence