Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13735 and CA264_13740 are separated by 11 nucleotides CA264_13740 and CA264_13745 are separated by 266 nucleotides CA264_13745 and CA264_13750 are separated by 159 nucleotides
CA264_13735: CA264_13735 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, at 3,209,293 to 3,210,186
_13735
CA264_13740: CA264_13740 - cytidylate kinase, at 3,210,198 to 3,210,902
_13740
CA264_13745: CA264_13745 - adenine deaminase, at 3,211,169 to 3,212,803
_13745
CA264_13750: CA264_13750 - response regulator, at 3,212,963 to 3,213,406
_13750
Position (kb)
3211
3212
3213 Strain fitness (log2 ratio)
-2
-1
0
1 at 3210.178 kb on + strand at 3210.925 kb on + strand at 3210.925 kb on + strand at 3210.982 kb on - strand at 3211.074 kb on - strand at 3211.106 kb on + strand at 3211.114 kb on - strand at 3211.150 kb on - strand at 3211.169 kb on - strand at 3211.169 kb on - strand at 3211.209 kb on + strand at 3211.209 kb on + strand at 3211.213 kb on + strand at 3211.213 kb on + strand at 3211.213 kb on + strand at 3211.214 kb on - strand at 3211.214 kb on - strand at 3211.298 kb on + strand at 3211.329 kb on + strand at 3211.329 kb on + strand at 3211.329 kb on + strand at 3211.440 kb on + strand, within CA264_13745 at 3211.440 kb on + strand, within CA264_13745 at 3211.441 kb on - strand, within CA264_13745 at 3211.454 kb on + strand, within CA264_13745 at 3211.454 kb on + strand, within CA264_13745 at 3211.454 kb on + strand, within CA264_13745 at 3211.455 kb on - strand, within CA264_13745 at 3211.455 kb on - strand, within CA264_13745 at 3211.598 kb on + strand, within CA264_13745 at 3211.680 kb on - strand, within CA264_13745 at 3212.030 kb on + strand, within CA264_13745 at 3212.030 kb on + strand, within CA264_13745 at 3212.030 kb on + strand, within CA264_13745 at 3212.030 kb on + strand, within CA264_13745 at 3212.031 kb on - strand, within CA264_13745 at 3212.031 kb on - strand, within CA264_13745 at 3212.078 kb on - strand, within CA264_13745 at 3212.079 kb on + strand, within CA264_13745 at 3212.079 kb on + strand, within CA264_13745 at 3212.080 kb on - strand, within CA264_13745 at 3212.080 kb on - strand, within CA264_13745 at 3212.080 kb on - strand, within CA264_13745 at 3212.084 kb on - strand, within CA264_13745 at 3212.084 kb on - strand, within CA264_13745 at 3212.085 kb on + strand, within CA264_13745 at 3212.085 kb on + strand, within CA264_13745 at 3212.085 kb on + strand, within CA264_13745 at 3212.086 kb on - strand, within CA264_13745 at 3212.198 kb on - strand, within CA264_13745 at 3212.257 kb on - strand, within CA264_13745 at 3212.476 kb on + strand, within CA264_13745 at 3212.476 kb on + strand, within CA264_13745 at 3212.477 kb on - strand, within CA264_13745 at 3212.479 kb on + strand, within CA264_13745 at 3212.480 kb on - strand, within CA264_13745 at 3212.551 kb on - strand, within CA264_13745 at 3212.624 kb on + strand, within CA264_13745 at 3212.901 kb on - strand at 3212.955 kb on + strand at 3212.958 kb on - strand at 3213.046 kb on + strand, within CA264_13750 at 3213.047 kb on - strand, within CA264_13750 at 3213.060 kb on + strand, within CA264_13750 at 3213.060 kb on + strand, within CA264_13750 at 3213.103 kb on + strand, within CA264_13750 at 3213.104 kb on - strand, within CA264_13750 at 3213.104 kb on - strand, within CA264_13750 at 3213.122 kb on - strand, within CA264_13750 at 3213.122 kb on - strand, within CA264_13750 at 3213.153 kb on + strand, within CA264_13750 at 3213.221 kb on - strand, within CA264_13750 at 3213.233 kb on - strand, within CA264_13750 at 3213.260 kb on - strand, within CA264_13750 at 3213.265 kb on + strand, within CA264_13750 at 3213.267 kb on + strand, within CA264_13750 at 3213.268 kb on - strand, within CA264_13750 at 3213.269 kb on + strand, within CA264_13750 at 3213.269 kb on + strand, within CA264_13750 at 3213.269 kb on + strand, within CA264_13750 at 3213.270 kb on - strand, within CA264_13750 at 3213.270 kb on - strand, within CA264_13750 at 3213.289 kb on + strand, within CA264_13750 at 3213.364 kb on + strand at 3213.364 kb on + strand at 3213.365 kb on - strand at 3213.407 kb on - strand at 3213.424 kb on + strand at 3213.425 kb on - strand at 3213.446 kb on - strand at 3213.598 kb on - strand at 3213.616 kb on - strand at 3213.646 kb on - strand at 3213.695 kb on + strand at 3213.695 kb on + strand at 3213.696 kb on - strand at 3213.697 kb on + strand at 3213.698 kb on - strand at 3213.705 kb on + strand at 3213.705 kb on + strand at 3213.706 kb on - strand at 3213.706 kb on - strand at 3213.732 kb on - strand at 3213.741 kb on + strand at 3213.741 kb on + strand at 3213.797 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 3,210,178 + -0.3 3,210,925 + +0.2 3,210,925 + +0.1 3,210,982 - +0.0 3,211,074 - +0.4 3,211,106 + +0.3 3,211,114 - +0.3 3,211,150 - -0.8 3,211,169 - +0.4 3,211,169 - -0.6 3,211,209 + -0.9 3,211,209 + -0.0 3,211,213 + -0.8 3,211,213 + -0.2 3,211,213 + -0.3 3,211,214 - +0.7 3,211,214 - -1.3 3,211,298 + -1.5 3,211,329 + +1.0 3,211,329 + -0.1 3,211,329 + +1.3 3,211,440 + CA264_13745 0.17 -0.6 3,211,440 + CA264_13745 0.17 +0.6 3,211,441 - CA264_13745 0.17 -1.0 3,211,454 + CA264_13745 0.17 +1.0 3,211,454 + CA264_13745 0.17 -0.6 3,211,454 + CA264_13745 0.17 -1.2 3,211,455 - CA264_13745 0.17 -2.0 3,211,455 - CA264_13745 0.17 -0.9 3,211,598 + CA264_13745 0.26 -0.3 3,211,680 - CA264_13745 0.31 +0.4 3,212,030 + CA264_13745 0.53 -0.1 3,212,030 + CA264_13745 0.53 -0.1 3,212,030 + CA264_13745 0.53 -1.0 3,212,030 + CA264_13745 0.53 -0.7 3,212,031 - CA264_13745 0.53 +0.4 3,212,031 - CA264_13745 0.53 -0.9 3,212,078 - CA264_13745 0.56 -0.6 3,212,079 + CA264_13745 0.56 +1.1 3,212,079 + CA264_13745 0.56 +0.4 3,212,080 - CA264_13745 0.56 -0.0 3,212,080 - CA264_13745 0.56 +1.0 3,212,080 - CA264_13745 0.56 -0.1 3,212,084 - CA264_13745 0.56 +0.6 3,212,084 - CA264_13745 0.56 -0.4 3,212,085 + CA264_13745 0.56 +0.2 3,212,085 + CA264_13745 0.56 -0.8 3,212,085 + CA264_13745 0.56 -0.4 3,212,086 - CA264_13745 0.56 +1.5 3,212,198 - CA264_13745 0.63 -0.1 3,212,257 - CA264_13745 0.67 -0.0 3,212,476 + CA264_13745 0.80 -1.6 3,212,476 + CA264_13745 0.80 -0.4 3,212,477 - CA264_13745 0.80 +0.3 3,212,479 + CA264_13745 0.80 -1.3 3,212,480 - CA264_13745 0.80 -0.1 3,212,551 - CA264_13745 0.85 -2.1 3,212,624 + CA264_13745 0.89 -0.9 3,212,901 - -1.3 3,212,955 + +0.2 3,212,958 - -0.5 3,213,046 + CA264_13750 0.19 -0.7 3,213,047 - CA264_13750 0.19 -0.4 3,213,060 + CA264_13750 0.22 +0.1 3,213,060 + CA264_13750 0.22 -1.7 3,213,103 + CA264_13750 0.32 -0.2 3,213,104 - CA264_13750 0.32 -0.2 3,213,104 - CA264_13750 0.32 +0.1 3,213,122 - CA264_13750 0.36 -0.3 3,213,122 - CA264_13750 0.36 -0.3 3,213,153 + CA264_13750 0.43 -0.0 3,213,221 - CA264_13750 0.58 -0.2 3,213,233 - CA264_13750 0.61 -0.8 3,213,260 - CA264_13750 0.67 +0.7 3,213,265 + CA264_13750 0.68 +0.6 3,213,267 + CA264_13750 0.68 +0.4 3,213,268 - CA264_13750 0.69 -0.4 3,213,269 + CA264_13750 0.69 +0.3 3,213,269 + CA264_13750 0.69 +0.7 3,213,269 + CA264_13750 0.69 +0.6 3,213,270 - CA264_13750 0.69 -0.0 3,213,270 - CA264_13750 0.69 +0.5 3,213,289 + CA264_13750 0.73 -0.4 3,213,364 + +0.3 3,213,364 + +0.7 3,213,365 - +0.1 3,213,407 - +1.0 3,213,424 + -0.1 3,213,425 - -0.3 3,213,446 - -0.1 3,213,598 - +1.5 3,213,616 - +0.1 3,213,646 - +0.2 3,213,695 + -1.0 3,213,695 + -0.0 3,213,696 - +0.5 3,213,697 + -0.6 3,213,698 - +0.2 3,213,705 + -0.2 3,213,705 + -0.2 3,213,706 - +0.1 3,213,706 - +0.4 3,213,732 - +0.0 3,213,741 + -0.9 3,213,741 + -0.5 3,213,797 + -1.1
Or see this region's nucleotide sequence