Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_13740

Experiment: m.b. perchlorate 50 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_13730 and CA264_13735 are separated by 78 nucleotidesCA264_13735 and CA264_13740 are separated by 11 nucleotidesCA264_13740 and CA264_13745 are separated by 266 nucleotides CA264_13730: CA264_13730 - hypothetical protein, at 3,208,672 to 3,209,214 _13730 CA264_13735: CA264_13735 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, at 3,209,293 to 3,210,186 _13735 CA264_13740: CA264_13740 - cytidylate kinase, at 3,210,198 to 3,210,902 _13740 CA264_13745: CA264_13745 - adenine deaminase, at 3,211,169 to 3,212,803 _13745 Position (kb) 3210 3211Strain fitness (log2 ratio) -2 -1 0 1at 3209.217 kb on + strandat 3209.217 kb on + strandat 3209.261 kb on + strandat 3209.262 kb on - strandat 3209.275 kb on - strandat 3209.321 kb on - strandat 3209.322 kb on + strandat 3209.323 kb on - strandat 3209.323 kb on - strandat 3209.323 kb on - strandat 3210.178 kb on + strandat 3210.925 kb on + strandat 3210.925 kb on + strandat 3210.982 kb on - strandat 3211.074 kb on - strandat 3211.106 kb on + strandat 3211.114 kb on - strandat 3211.150 kb on - strandat 3211.169 kb on - strandat 3211.169 kb on - strandat 3211.209 kb on + strandat 3211.209 kb on + strandat 3211.213 kb on + strandat 3211.213 kb on + strandat 3211.213 kb on + strandat 3211.214 kb on - strandat 3211.214 kb on - strandat 3211.298 kb on + strandat 3211.329 kb on + strandat 3211.329 kb on + strandat 3211.329 kb on + strandat 3211.440 kb on + strand, within CA264_13745at 3211.440 kb on + strand, within CA264_13745at 3211.441 kb on - strand, within CA264_13745at 3211.454 kb on + strand, within CA264_13745at 3211.454 kb on + strand, within CA264_13745at 3211.454 kb on + strand, within CA264_13745at 3211.455 kb on - strand, within CA264_13745at 3211.455 kb on - strand, within CA264_13745at 3211.598 kb on + strand, within CA264_13745at 3211.680 kb on - strand, within CA264_13745

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM
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3,209,217 + -0.6
3,209,217 + -0.4
3,209,261 + +0.8
3,209,262 - -0.4
3,209,275 - +0.6
3,209,321 - -1.0
3,209,322 + -0.6
3,209,323 - +0.5
3,209,323 - +0.4
3,209,323 - -0.0
3,210,178 + -0.3
3,210,925 + +0.2
3,210,925 + +0.1
3,210,982 - +0.0
3,211,074 - +0.4
3,211,106 + +0.3
3,211,114 - +0.3
3,211,150 - -0.8
3,211,169 - +0.4
3,211,169 - -0.6
3,211,209 + -0.9
3,211,209 + -0.0
3,211,213 + -0.8
3,211,213 + -0.2
3,211,213 + -0.3
3,211,214 - +0.7
3,211,214 - -1.3
3,211,298 + -1.5
3,211,329 + +1.0
3,211,329 + -0.1
3,211,329 + +1.3
3,211,440 + CA264_13745 0.17 -0.6
3,211,440 + CA264_13745 0.17 +0.6
3,211,441 - CA264_13745 0.17 -1.0
3,211,454 + CA264_13745 0.17 +1.0
3,211,454 + CA264_13745 0.17 -0.6
3,211,454 + CA264_13745 0.17 -1.2
3,211,455 - CA264_13745 0.17 -2.0
3,211,455 - CA264_13745 0.17 -0.9
3,211,598 + CA264_13745 0.26 -0.3
3,211,680 - CA264_13745 0.31 +0.4

Or see this region's nucleotide sequence