Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13495 and CA264_13500 are separated by 141 nucleotides CA264_13500 and CA264_13505 are separated by 22 nucleotides CA264_13505 and CA264_13510 are separated by 23 nucleotides
CA264_13495: CA264_13495 - aldehyde dehydrogenase, at 3,151,994 to 3,153,457
_13495
CA264_13500: CA264_13500 - hypothetical protein, at 3,153,599 to 3,154,099
_13500
CA264_13505: CA264_13505 - hypothetical protein, at 3,154,122 to 3,154,676
_13505
CA264_13510: CA264_13510 - hypothetical protein, at 3,154,700 to 3,156,700
_13510
Position (kb)
3153
3154
3155 Strain fitness (log2 ratio)
-2
-1
0
1 at 3153.023 kb on + strand, within CA264_13495 at 3153.024 kb on - strand, within CA264_13495 at 3153.024 kb on - strand, within CA264_13495 at 3153.072 kb on - strand, within CA264_13495 at 3153.191 kb on + strand, within CA264_13495 at 3153.192 kb on - strand, within CA264_13495 at 3153.303 kb on + strand, within CA264_13495 at 3153.303 kb on + strand, within CA264_13495 at 3153.304 kb on - strand, within CA264_13495 at 3153.426 kb on + strand at 3153.426 kb on + strand at 3153.427 kb on - strand at 3153.427 kb on - strand at 3153.427 kb on - strand at 3153.427 kb on - strand at 3153.427 kb on - strand at 3153.427 kb on - strand at 3153.427 kb on - strand at 3153.428 kb on + strand at 3153.446 kb on - strand at 3153.448 kb on - strand at 3153.448 kb on - strand at 3153.457 kb on + strand at 3153.457 kb on + strand at 3153.480 kb on + strand at 3153.490 kb on + strand at 3153.490 kb on + strand at 3153.491 kb on - strand at 3153.491 kb on - strand at 3153.491 kb on - strand at 3153.501 kb on + strand at 3153.502 kb on - strand at 3153.502 kb on - strand at 3153.505 kb on - strand at 3153.505 kb on - strand at 3153.508 kb on - strand at 3153.510 kb on - strand at 3153.515 kb on + strand at 3153.515 kb on + strand at 3153.515 kb on + strand at 3153.515 kb on + strand at 3153.515 kb on + strand at 3153.515 kb on + strand at 3153.516 kb on - strand at 3153.516 kb on - strand at 3153.537 kb on - strand at 3153.537 kb on - strand at 3153.538 kb on + strand at 3153.538 kb on + strand at 3153.588 kb on + strand at 3153.588 kb on + strand at 3153.588 kb on + strand at 3153.588 kb on + strand at 3153.589 kb on - strand at 3153.589 kb on - strand at 3153.589 kb on - strand at 3153.593 kb on - strand at 3153.601 kb on - strand at 3153.760 kb on + strand, within CA264_13500 at 3153.761 kb on - strand, within CA264_13500 at 3153.886 kb on + strand, within CA264_13500 at 3153.910 kb on - strand, within CA264_13500 at 3153.915 kb on - strand, within CA264_13500 at 3153.980 kb on + strand, within CA264_13500 at 3153.980 kb on + strand, within CA264_13500 at 3153.981 kb on - strand, within CA264_13500 at 3153.986 kb on + strand, within CA264_13500 at 3153.987 kb on - strand, within CA264_13500 at 3153.987 kb on - strand, within CA264_13500 at 3154.008 kb on + strand, within CA264_13500 at 3154.009 kb on - strand, within CA264_13500 at 3154.009 kb on - strand, within CA264_13500 at 3154.009 kb on - strand, within CA264_13500 at 3154.092 kb on - strand at 3154.092 kb on - strand at 3154.096 kb on - strand at 3154.096 kb on - strand at 3154.096 kb on - strand at 3154.096 kb on - strand at 3154.099 kb on + strand at 3154.099 kb on + strand at 3154.099 kb on + strand at 3154.099 kb on + strand at 3154.100 kb on - strand at 3154.108 kb on - strand at 3154.150 kb on - strand at 3154.161 kb on + strand at 3154.174 kb on - strand at 3154.316 kb on + strand, within CA264_13505 at 3154.317 kb on - strand, within CA264_13505 at 3154.561 kb on + strand, within CA264_13505 at 3154.561 kb on + strand, within CA264_13505 at 3154.621 kb on - strand at 3154.688 kb on + strand at 3154.689 kb on - strand at 3154.719 kb on + strand at 3154.720 kb on - strand at 3154.844 kb on + strand at 3154.845 kb on - strand at 3155.022 kb on - strand, within CA264_13510 at 3155.037 kb on + strand, within CA264_13510
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 3,153,023 + CA264_13495 0.70 -0.5 3,153,024 - CA264_13495 0.70 -1.3 3,153,024 - CA264_13495 0.70 -0.7 3,153,072 - CA264_13495 0.74 -0.6 3,153,191 + CA264_13495 0.82 -0.2 3,153,192 - CA264_13495 0.82 -0.5 3,153,303 + CA264_13495 0.89 -0.5 3,153,303 + CA264_13495 0.89 +1.5 3,153,304 - CA264_13495 0.89 -0.5 3,153,426 + +0.4 3,153,426 + +0.1 3,153,427 - -0.0 3,153,427 - -0.2 3,153,427 - -0.6 3,153,427 - -1.0 3,153,427 - -0.7 3,153,427 - +0.2 3,153,427 - -0.3 3,153,428 + -0.2 3,153,446 - +0.7 3,153,448 - -0.2 3,153,448 - -0.5 3,153,457 + -0.6 3,153,457 + -0.3 3,153,480 + -0.0 3,153,490 + -0.6 3,153,490 + -0.0 3,153,491 - -0.6 3,153,491 - -0.6 3,153,491 - +1.5 3,153,501 + +0.9 3,153,502 - -0.9 3,153,502 - -0.4 3,153,505 - +0.8 3,153,505 - +0.1 3,153,508 - +0.2 3,153,510 - +0.7 3,153,515 + -0.6 3,153,515 + -0.2 3,153,515 + -0.5 3,153,515 + -0.4 3,153,515 + +0.5 3,153,515 + +0.1 3,153,516 - -0.8 3,153,516 - -0.0 3,153,537 - +1.2 3,153,537 - -1.0 3,153,538 + -1.0 3,153,538 + -0.4 3,153,588 + -0.3 3,153,588 + -0.9 3,153,588 + +0.9 3,153,588 + -0.7 3,153,589 - -1.5 3,153,589 - -1.7 3,153,589 - -0.1 3,153,593 - -0.2 3,153,601 - -0.6 3,153,760 + CA264_13500 0.32 +0.1 3,153,761 - CA264_13500 0.32 -1.1 3,153,886 + CA264_13500 0.57 -0.0 3,153,910 - CA264_13500 0.62 +0.7 3,153,915 - CA264_13500 0.63 +0.2 3,153,980 + CA264_13500 0.76 -2.2 3,153,980 + CA264_13500 0.76 +0.3 3,153,981 - CA264_13500 0.76 +0.0 3,153,986 + CA264_13500 0.77 +0.3 3,153,987 - CA264_13500 0.77 -1.1 3,153,987 - CA264_13500 0.77 -1.1 3,154,008 + CA264_13500 0.82 +0.1 3,154,009 - CA264_13500 0.82 -1.2 3,154,009 - CA264_13500 0.82 -0.6 3,154,009 - CA264_13500 0.82 -0.3 3,154,092 - +0.5 3,154,092 - -1.2 3,154,096 - +0.1 3,154,096 - +0.2 3,154,096 - -0.4 3,154,096 - -0.5 3,154,099 + -0.5 3,154,099 + -0.1 3,154,099 + +0.1 3,154,099 + -1.0 3,154,100 - -0.3 3,154,108 - +0.3 3,154,150 - +0.1 3,154,161 + +0.5 3,154,174 - -1.0 3,154,316 + CA264_13505 0.35 -0.5 3,154,317 - CA264_13505 0.35 -0.7 3,154,561 + CA264_13505 0.79 +0.7 3,154,561 + CA264_13505 0.79 -0.8 3,154,621 - -0.1 3,154,688 + -1.3 3,154,689 - +0.1 3,154,719 + +0.4 3,154,720 - -0.9 3,154,844 + -0.6 3,154,845 - -0.3 3,155,022 - CA264_13510 0.16 +0.0 3,155,037 + CA264_13510 0.17 +0.5
Or see this region's nucleotide sequence