Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13210 and CA264_13215 are separated by 153 nucleotides CA264_13215 and CA264_13220 are separated by 183 nucleotides CA264_13220 and CA264_13225 are separated by 31 nucleotides CA264_13225 and CA264_13230 are separated by 115 nucleotides
CA264_13210: CA264_13210 - hypothetical protein, at 3,080,763 to 3,081,101
_13210
CA264_13215: CA264_13215 - hypothetical protein, at 3,081,255 to 3,081,674
_13215
CA264_13220: CA264_13220 - kazal domain protein, at 3,081,858 to 3,082,094
_13220
CA264_13225: CA264_13225 - cupin, at 3,082,126 to 3,082,497
_13225
CA264_13230: CA264_13230 - enoyl-ACP reductase, at 3,082,613 to 3,083,425
_13230
Position (kb)
3081
3082
3083 Strain fitness (log2 ratio)
-2
-1
0
1 at 3080.964 kb on - strand, within CA264_13210 at 3080.973 kb on - strand, within CA264_13210 at 3081.015 kb on - strand, within CA264_13210 at 3081.079 kb on - strand at 3081.090 kb on - strand at 3081.137 kb on + strand at 3081.138 kb on - strand at 3081.157 kb on - strand at 3081.169 kb on - strand at 3081.169 kb on - strand at 3081.173 kb on + strand at 3081.174 kb on - strand at 3081.176 kb on - strand at 3081.179 kb on + strand at 3081.180 kb on - strand at 3081.180 kb on - strand at 3081.181 kb on + strand at 3081.182 kb on - strand at 3081.189 kb on - strand at 3081.207 kb on - strand at 3081.217 kb on + strand at 3081.331 kb on + strand, within CA264_13215 at 3081.332 kb on - strand, within CA264_13215 at 3081.332 kb on - strand, within CA264_13215 at 3081.358 kb on + strand, within CA264_13215 at 3081.364 kb on - strand, within CA264_13215 at 3081.388 kb on + strand, within CA264_13215 at 3081.388 kb on + strand, within CA264_13215 at 3081.628 kb on - strand, within CA264_13215 at 3081.674 kb on + strand at 3081.675 kb on - strand at 3081.703 kb on + strand at 3081.782 kb on + strand at 3081.782 kb on + strand at 3081.782 kb on + strand at 3081.817 kb on + strand at 3081.817 kb on + strand at 3081.821 kb on + strand at 3081.822 kb on - strand at 3081.839 kb on - strand at 3081.839 kb on - strand at 3081.842 kb on + strand at 3081.843 kb on - strand at 3081.852 kb on + strand at 3081.853 kb on - strand at 3081.853 kb on - strand at 3081.855 kb on - strand at 3081.988 kb on - strand, within CA264_13220 at 3082.020 kb on + strand, within CA264_13220 at 3082.055 kb on + strand, within CA264_13220 at 3082.065 kb on - strand, within CA264_13220 at 3082.111 kb on + strand at 3082.125 kb on + strand at 3082.193 kb on + strand, within CA264_13225 at 3082.379 kb on + strand, within CA264_13225 at 3082.379 kb on + strand, within CA264_13225 at 3082.380 kb on - strand, within CA264_13225 at 3082.380 kb on - strand, within CA264_13225 at 3082.383 kb on + strand, within CA264_13225 at 3082.384 kb on - strand, within CA264_13225 at 3082.438 kb on + strand, within CA264_13225 at 3082.438 kb on + strand, within CA264_13225 at 3082.447 kb on - strand, within CA264_13225 at 3082.550 kb on - strand at 3082.615 kb on - strand at 3082.615 kb on - strand at 3082.619 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 3,080,964 - CA264_13210 0.59 +0.6 3,080,973 - CA264_13210 0.62 +0.9 3,081,015 - CA264_13210 0.74 -0.4 3,081,079 - -0.6 3,081,090 - -0.6 3,081,137 + +0.1 3,081,138 - -0.4 3,081,157 - +0.1 3,081,169 - -1.2 3,081,169 - +0.8 3,081,173 + +0.1 3,081,174 - +0.1 3,081,176 - +1.3 3,081,179 + +0.0 3,081,180 - -2.1 3,081,180 - -0.8 3,081,181 + +1.3 3,081,182 - +0.1 3,081,189 - -0.3 3,081,207 - +1.2 3,081,217 + +1.5 3,081,331 + CA264_13215 0.18 -0.9 3,081,332 - CA264_13215 0.18 -0.6 3,081,332 - CA264_13215 0.18 +0.3 3,081,358 + CA264_13215 0.25 -0.2 3,081,364 - CA264_13215 0.26 -1.3 3,081,388 + CA264_13215 0.32 +0.1 3,081,388 + CA264_13215 0.32 +0.8 3,081,628 - CA264_13215 0.89 -0.5 3,081,674 + -1.7 3,081,675 - +0.3 3,081,703 + +0.5 3,081,782 + +0.1 3,081,782 + -0.0 3,081,782 + -0.3 3,081,817 + -0.7 3,081,817 + +1.5 3,081,821 + -0.2 3,081,822 - -1.2 3,081,839 - +0.6 3,081,839 - -0.2 3,081,842 + +1.3 3,081,843 - -1.5 3,081,852 + -0.4 3,081,853 - +0.0 3,081,853 - +0.3 3,081,855 - -0.0 3,081,988 - CA264_13220 0.55 +0.1 3,082,020 + CA264_13220 0.68 +0.5 3,082,055 + CA264_13220 0.83 +1.1 3,082,065 - CA264_13220 0.87 -0.2 3,082,111 + +0.5 3,082,125 + +0.2 3,082,193 + CA264_13225 0.18 +0.8 3,082,379 + CA264_13225 0.68 +0.1 3,082,379 + CA264_13225 0.68 -0.0 3,082,380 - CA264_13225 0.68 -0.4 3,082,380 - CA264_13225 0.68 +1.3 3,082,383 + CA264_13225 0.69 +0.3 3,082,384 - CA264_13225 0.69 -0.7 3,082,438 + CA264_13225 0.84 +0.8 3,082,438 + CA264_13225 0.84 -0.5 3,082,447 - CA264_13225 0.86 +0.8 3,082,550 - -0.1 3,082,615 - -0.4 3,082,615 - +0.9 3,082,619 - -0.6
Or see this region's nucleotide sequence