Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11910 and CA264_11915 are separated by 211 nucleotides CA264_11915 and CA264_11920 are separated by 3 nucleotides CA264_11920 and CA264_11925 are separated by 88 nucleotides
CA264_11910: CA264_11910 - replicative DNA helicase, at 2,768,385 to 2,769,953
_11910
CA264_11915: CA264_11915 - peptidoglycan synthetase, at 2,770,165 to 2,771,550
_11915
CA264_11920: CA264_11920 - DNA polymerase III subunit epsilon, at 2,771,554 to 2,772,360
_11920
CA264_11925: CA264_11925 - hypothetical protein, at 2,772,449 to 2,773,078
_11925
Position (kb)
2770
2771
2772 Strain fitness (log2 ratio)
-2
-1
0
1 at 2769.965 kb on + strand at 2769.965 kb on + strand at 2769.965 kb on + strand at 2769.965 kb on + strand at 2769.965 kb on + strand at 2769.966 kb on - strand at 2769.966 kb on - strand at 2769.966 kb on - strand at 2769.967 kb on + strand at 2769.967 kb on + strand at 2769.968 kb on - strand at 2769.968 kb on - strand at 2769.973 kb on + strand at 2769.973 kb on + strand at 2769.973 kb on + strand at 2769.973 kb on + strand at 2769.974 kb on - strand at 2769.974 kb on - strand at 2769.974 kb on - strand at 2769.975 kb on + strand at 2769.975 kb on + strand at 2769.975 kb on + strand at 2769.976 kb on - strand at 2769.976 kb on - strand at 2769.977 kb on + strand at 2770.068 kb on - strand at 2770.068 kb on - strand at 2770.068 kb on - strand at 2770.068 kb on - strand at 2770.068 kb on - strand at 2770.092 kb on + strand at 2770.095 kb on + strand at 2770.101 kb on - strand at 2770.101 kb on - strand at 2770.103 kb on - strand at 2770.103 kb on - strand at 2770.107 kb on - strand at 2770.112 kb on - strand at 2770.116 kb on + strand at 2770.120 kb on + strand at 2770.124 kb on + strand at 2770.152 kb on + strand at 2770.152 kb on + strand at 2770.152 kb on + strand at 2770.190 kb on + strand at 2770.190 kb on + strand at 2770.191 kb on - strand at 2770.191 kb on - strand at 2770.191 kb on - strand at 2770.191 kb on - strand at 2770.286 kb on - strand at 2770.724 kb on + strand, within CA264_11915 at 2770.781 kb on + strand, within CA264_11915 at 2770.871 kb on + strand, within CA264_11915 at 2770.904 kb on - strand, within CA264_11915 at 2771.485 kb on - strand at 2771.502 kb on + strand at 2771.548 kb on + strand at 2771.548 kb on + strand at 2771.549 kb on - strand at 2771.549 kb on - strand at 2771.549 kb on - strand at 2771.549 kb on - strand at 2771.549 kb on - strand at 2771.554 kb on - strand at 2771.743 kb on + strand, within CA264_11920 at 2771.744 kb on - strand, within CA264_11920 at 2771.769 kb on + strand, within CA264_11920 at 2771.830 kb on + strand, within CA264_11920 at 2771.831 kb on - strand, within CA264_11920 at 2771.832 kb on + strand, within CA264_11920 at 2771.833 kb on - strand, within CA264_11920 at 2771.851 kb on - strand, within CA264_11920 at 2771.980 kb on + strand, within CA264_11920 at 2772.037 kb on + strand, within CA264_11920 at 2772.037 kb on + strand, within CA264_11920 at 2772.037 kb on + strand, within CA264_11920 at 2772.037 kb on + strand, within CA264_11920 at 2772.067 kb on + strand, within CA264_11920 at 2772.068 kb on - strand, within CA264_11920 at 2772.103 kb on - strand, within CA264_11920 at 2772.126 kb on + strand, within CA264_11920 at 2772.126 kb on + strand, within CA264_11920 at 2772.126 kb on + strand, within CA264_11920 at 2772.126 kb on + strand, within CA264_11920 at 2772.188 kb on - strand, within CA264_11920 at 2772.189 kb on + strand, within CA264_11920 at 2772.193 kb on - strand, within CA264_11920 at 2772.227 kb on - strand, within CA264_11920 at 2772.229 kb on - strand, within CA264_11920 at 2772.271 kb on + strand, within CA264_11920 at 2772.308 kb on - strand at 2772.400 kb on + strand at 2772.400 kb on + strand at 2772.428 kb on + strand at 2772.428 kb on + strand at 2772.428 kb on + strand at 2772.437 kb on + strand at 2772.438 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 2,769,965 + -0.2 2,769,965 + +0.3 2,769,965 + -0.4 2,769,965 + -1.4 2,769,965 + -0.0 2,769,966 - -0.4 2,769,966 - -0.3 2,769,966 - -0.0 2,769,967 + +0.1 2,769,967 + -0.0 2,769,968 - +0.8 2,769,968 - -0.2 2,769,973 + +0.5 2,769,973 + +0.5 2,769,973 + -0.8 2,769,973 + -0.5 2,769,974 - -1.1 2,769,974 - +0.0 2,769,974 - -0.1 2,769,975 + +0.1 2,769,975 + +0.3 2,769,975 + -1.8 2,769,976 - +0.0 2,769,976 - +0.4 2,769,977 + -0.1 2,770,068 - +0.4 2,770,068 - +0.7 2,770,068 - +0.4 2,770,068 - +0.0 2,770,068 - +0.2 2,770,092 + +0.1 2,770,095 + -0.1 2,770,101 - +0.9 2,770,101 - +0.3 2,770,103 - -0.7 2,770,103 - +0.1 2,770,107 - -0.6 2,770,112 - -0.5 2,770,116 + -0.0 2,770,120 + +0.4 2,770,124 + +0.5 2,770,152 + -0.7 2,770,152 + +0.1 2,770,152 + -0.8 2,770,190 + -0.1 2,770,190 + -0.5 2,770,191 - +0.6 2,770,191 - -0.6 2,770,191 - +0.3 2,770,191 - -0.2 2,770,286 - -1.1 2,770,724 + CA264_11915 0.40 +0.9 2,770,781 + CA264_11915 0.44 -0.2 2,770,871 + CA264_11915 0.51 -0.4 2,770,904 - CA264_11915 0.53 -0.5 2,771,485 - -0.6 2,771,502 + +0.8 2,771,548 + -0.7 2,771,548 + +0.5 2,771,549 - -0.2 2,771,549 - +0.9 2,771,549 - -0.2 2,771,549 - -0.9 2,771,549 - -0.6 2,771,554 - -0.4 2,771,743 + CA264_11920 0.23 +0.5 2,771,744 - CA264_11920 0.24 -0.5 2,771,769 + CA264_11920 0.27 +0.0 2,771,830 + CA264_11920 0.34 -0.2 2,771,831 - CA264_11920 0.34 +0.1 2,771,832 + CA264_11920 0.34 -0.3 2,771,833 - CA264_11920 0.35 +0.4 2,771,851 - CA264_11920 0.37 -1.1 2,771,980 + CA264_11920 0.53 +0.5 2,772,037 + CA264_11920 0.60 +0.7 2,772,037 + CA264_11920 0.60 +0.7 2,772,037 + CA264_11920 0.60 +0.3 2,772,037 + CA264_11920 0.60 -0.5 2,772,067 + CA264_11920 0.64 +0.1 2,772,068 - CA264_11920 0.64 -0.8 2,772,103 - CA264_11920 0.68 +0.3 2,772,126 + CA264_11920 0.71 -0.2 2,772,126 + CA264_11920 0.71 -0.6 2,772,126 + CA264_11920 0.71 +0.9 2,772,126 + CA264_11920 0.71 -1.1 2,772,188 - CA264_11920 0.79 -0.3 2,772,189 + CA264_11920 0.79 -0.3 2,772,193 - CA264_11920 0.79 +0.2 2,772,227 - CA264_11920 0.83 -1.1 2,772,229 - CA264_11920 0.84 +0.1 2,772,271 + CA264_11920 0.89 +1.6 2,772,308 - +0.0 2,772,400 + +0.0 2,772,400 + +1.2 2,772,428 + -0.5 2,772,428 + -0.6 2,772,428 + +0.3 2,772,437 + +0.1 2,772,438 - +0.6
Or see this region's nucleotide sequence