Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11840 and CA264_11845 are separated by 52 nucleotides CA264_11845 and CA264_11850 are separated by 157 nucleotides
CA264_11840: CA264_11840 - membrane-binding protein, at 2,754,016 to 2,755,341
_11840
CA264_11845: CA264_11845 - hypothetical protein, at 2,755,394 to 2,755,873
_11845
CA264_11850: CA264_11850 - short-chain dehydrogenase, at 2,756,031 to 2,757,068
_11850
Position (kb)
2755
2756 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2754.470 kb on - strand, within CA264_11840 at 2754.470 kb on - strand, within CA264_11840 at 2754.473 kb on - strand, within CA264_11840 at 2754.577 kb on + strand, within CA264_11840 at 2754.676 kb on + strand, within CA264_11840 at 2754.686 kb on - strand, within CA264_11840 at 2754.689 kb on - strand, within CA264_11840 at 2754.793 kb on + strand, within CA264_11840 at 2754.794 kb on - strand, within CA264_11840 at 2754.796 kb on - strand, within CA264_11840 at 2754.810 kb on - strand, within CA264_11840 at 2754.888 kb on + strand, within CA264_11840 at 2754.905 kb on - strand, within CA264_11840 at 2754.973 kb on + strand, within CA264_11840 at 2754.974 kb on - strand, within CA264_11840 at 2755.031 kb on + strand, within CA264_11840 at 2755.031 kb on + strand, within CA264_11840 at 2755.031 kb on + strand, within CA264_11840 at 2755.032 kb on - strand, within CA264_11840 at 2755.052 kb on - strand, within CA264_11840 at 2755.055 kb on - strand, within CA264_11840 at 2755.098 kb on + strand, within CA264_11840 at 2755.099 kb on - strand, within CA264_11840 at 2755.099 kb on - strand, within CA264_11840 at 2755.099 kb on - strand, within CA264_11840 at 2755.119 kb on + strand, within CA264_11840 at 2755.119 kb on + strand, within CA264_11840 at 2755.119 kb on + strand, within CA264_11840 at 2755.123 kb on + strand, within CA264_11840 at 2755.124 kb on - strand, within CA264_11840 at 2755.124 kb on - strand, within CA264_11840 at 2755.270 kb on - strand at 2755.339 kb on + strand at 2755.391 kb on + strand at 2755.431 kb on - strand at 2755.471 kb on + strand, within CA264_11845 at 2755.582 kb on + strand, within CA264_11845 at 2755.583 kb on - strand, within CA264_11845 at 2755.621 kb on + strand, within CA264_11845 at 2755.621 kb on + strand, within CA264_11845 at 2755.623 kb on + strand, within CA264_11845 at 2755.685 kb on + strand, within CA264_11845 at 2755.686 kb on - strand, within CA264_11845 at 2755.738 kb on - strand, within CA264_11845 at 2755.841 kb on + strand at 2755.842 kb on - strand at 2755.873 kb on + strand at 2755.911 kb on + strand at 2755.912 kb on - strand at 2755.991 kb on - strand at 2756.014 kb on - strand at 2756.014 kb on - strand at 2756.049 kb on + strand at 2756.050 kb on - strand at 2756.050 kb on - strand at 2756.102 kb on - strand at 2756.102 kb on - strand at 2756.223 kb on + strand, within CA264_11850 at 2756.223 kb on + strand, within CA264_11850 at 2756.224 kb on - strand, within CA264_11850 at 2756.228 kb on - strand, within CA264_11850 at 2756.233 kb on + strand, within CA264_11850 at 2756.233 kb on + strand, within CA264_11850 at 2756.368 kb on - strand, within CA264_11850 at 2756.377 kb on + strand, within CA264_11850 at 2756.392 kb on - strand, within CA264_11850 at 2756.392 kb on - strand, within CA264_11850 at 2756.392 kb on - strand, within CA264_11850 at 2756.461 kb on + strand, within CA264_11850 at 2756.511 kb on + strand, within CA264_11850 at 2756.544 kb on + strand, within CA264_11850 at 2756.544 kb on + strand, within CA264_11850 at 2756.545 kb on - strand, within CA264_11850 at 2756.602 kb on + strand, within CA264_11850 at 2756.608 kb on + strand, within CA264_11850 at 2756.679 kb on - strand, within CA264_11850 at 2756.718 kb on + strand, within CA264_11850 at 2756.779 kb on + strand, within CA264_11850 at 2756.780 kb on - strand, within CA264_11850 at 2756.780 kb on - strand, within CA264_11850 at 2756.811 kb on + strand, within CA264_11850
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 2,754,470 - CA264_11840 0.34 -0.2 2,754,470 - CA264_11840 0.34 +0.1 2,754,473 - CA264_11840 0.34 +0.5 2,754,577 + CA264_11840 0.42 -0.3 2,754,676 + CA264_11840 0.50 -0.4 2,754,686 - CA264_11840 0.51 +0.9 2,754,689 - CA264_11840 0.51 +0.6 2,754,793 + CA264_11840 0.59 -1.2 2,754,794 - CA264_11840 0.59 +0.9 2,754,796 - CA264_11840 0.59 +0.2 2,754,810 - CA264_11840 0.60 +0.1 2,754,888 + CA264_11840 0.66 +0.4 2,754,905 - CA264_11840 0.67 +0.7 2,754,973 + CA264_11840 0.72 -1.2 2,754,974 - CA264_11840 0.72 -0.9 2,755,031 + CA264_11840 0.77 -1.0 2,755,031 + CA264_11840 0.77 -0.7 2,755,031 + CA264_11840 0.77 -0.5 2,755,032 - CA264_11840 0.77 -0.5 2,755,052 - CA264_11840 0.78 -0.1 2,755,055 - CA264_11840 0.78 -1.0 2,755,098 + CA264_11840 0.82 +0.2 2,755,099 - CA264_11840 0.82 +1.1 2,755,099 - CA264_11840 0.82 -0.2 2,755,099 - CA264_11840 0.82 -0.4 2,755,119 + CA264_11840 0.83 -0.9 2,755,119 + CA264_11840 0.83 -1.1 2,755,119 + CA264_11840 0.83 -0.7 2,755,123 + CA264_11840 0.83 -0.2 2,755,124 - CA264_11840 0.84 +1.1 2,755,124 - CA264_11840 0.84 -0.7 2,755,270 - -0.4 2,755,339 + -0.2 2,755,391 + +0.7 2,755,431 - +1.1 2,755,471 + CA264_11845 0.16 -0.2 2,755,582 + CA264_11845 0.39 -1.1 2,755,583 - CA264_11845 0.39 +1.5 2,755,621 + CA264_11845 0.47 -0.0 2,755,621 + CA264_11845 0.47 -1.3 2,755,623 + CA264_11845 0.48 +0.5 2,755,685 + CA264_11845 0.61 -0.9 2,755,686 - CA264_11845 0.61 +0.4 2,755,738 - CA264_11845 0.72 -0.3 2,755,841 + -0.7 2,755,842 - +0.1 2,755,873 + -0.4 2,755,911 + -1.0 2,755,912 - -0.0 2,755,991 - -0.1 2,756,014 - +0.3 2,756,014 - -1.3 2,756,049 + -0.1 2,756,050 - -0.0 2,756,050 - +0.9 2,756,102 - +1.0 2,756,102 - +0.1 2,756,223 + CA264_11850 0.18 -1.5 2,756,223 + CA264_11850 0.18 -0.3 2,756,224 - CA264_11850 0.19 -0.5 2,756,228 - CA264_11850 0.19 -3.0 2,756,233 + CA264_11850 0.19 +0.7 2,756,233 + CA264_11850 0.19 +0.7 2,756,368 - CA264_11850 0.32 -0.5 2,756,377 + CA264_11850 0.33 -0.3 2,756,392 - CA264_11850 0.35 -0.3 2,756,392 - CA264_11850 0.35 -0.4 2,756,392 - CA264_11850 0.35 +0.1 2,756,461 + CA264_11850 0.41 +1.3 2,756,511 + CA264_11850 0.46 -0.1 2,756,544 + CA264_11850 0.49 -0.3 2,756,544 + CA264_11850 0.49 -0.3 2,756,545 - CA264_11850 0.50 -0.5 2,756,602 + CA264_11850 0.55 +0.5 2,756,608 + CA264_11850 0.56 +1.2 2,756,679 - CA264_11850 0.62 +1.2 2,756,718 + CA264_11850 0.66 -0.2 2,756,779 + CA264_11850 0.72 -0.5 2,756,780 - CA264_11850 0.72 +0.7 2,756,780 - CA264_11850 0.72 -1.4 2,756,811 + CA264_11850 0.75 +0.5
Or see this region's nucleotide sequence