Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10350 and CA264_10355 are separated by 134 nucleotides CA264_10355 and CA264_10360 are separated by 85 nucleotides
CA264_10350: CA264_10350 - hypothetical protein, at 2,405,927 to 2,407,333
_10350
CA264_10355: CA264_10355 - hypothetical protein, at 2,407,468 to 2,408,946
_10355
CA264_10360: CA264_10360 - hypothetical protein, at 2,409,032 to 2,410,042
_10360
Position (kb)
2407
2408
2409 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2406.517 kb on + strand, within CA264_10350 at 2406.518 kb on - strand, within CA264_10350 at 2406.573 kb on - strand, within CA264_10350 at 2406.576 kb on + strand, within CA264_10350 at 2406.577 kb on - strand, within CA264_10350 at 2406.577 kb on - strand, within CA264_10350 at 2406.581 kb on + strand, within CA264_10350 at 2406.596 kb on - strand, within CA264_10350 at 2406.599 kb on + strand, within CA264_10350 at 2406.600 kb on - strand, within CA264_10350 at 2406.603 kb on - strand, within CA264_10350 at 2406.676 kb on - strand, within CA264_10350 at 2406.692 kb on + strand, within CA264_10350 at 2406.735 kb on - strand, within CA264_10350 at 2406.739 kb on + strand, within CA264_10350 at 2406.739 kb on - strand, within CA264_10350 at 2406.803 kb on + strand, within CA264_10350 at 2406.811 kb on + strand, within CA264_10350 at 2406.811 kb on + strand, within CA264_10350 at 2406.811 kb on + strand, within CA264_10350 at 2406.812 kb on - strand, within CA264_10350 at 2406.812 kb on - strand, within CA264_10350 at 2406.814 kb on - strand, within CA264_10350 at 2406.814 kb on - strand, within CA264_10350 at 2406.841 kb on - strand, within CA264_10350 at 2406.857 kb on - strand, within CA264_10350 at 2406.902 kb on - strand, within CA264_10350 at 2406.923 kb on + strand, within CA264_10350 at 2406.924 kb on - strand, within CA264_10350 at 2406.928 kb on + strand, within CA264_10350 at 2406.929 kb on - strand, within CA264_10350 at 2406.929 kb on - strand, within CA264_10350 at 2406.931 kb on - strand, within CA264_10350 at 2406.931 kb on - strand, within CA264_10350 at 2406.947 kb on - strand, within CA264_10350 at 2406.964 kb on - strand, within CA264_10350 at 2406.968 kb on - strand, within CA264_10350 at 2406.982 kb on + strand, within CA264_10350 at 2407.019 kb on + strand, within CA264_10350 at 2407.019 kb on + strand, within CA264_10350 at 2407.087 kb on + strand, within CA264_10350 at 2407.113 kb on + strand, within CA264_10350 at 2407.113 kb on + strand, within CA264_10350 at 2407.118 kb on + strand, within CA264_10350 at 2407.193 kb on + strand at 2407.194 kb on - strand at 2407.194 kb on - strand at 2407.195 kb on + strand at 2407.196 kb on - strand at 2407.209 kb on + strand at 2407.210 kb on - strand at 2407.210 kb on - strand at 2407.279 kb on - strand at 2407.291 kb on - strand at 2407.331 kb on + strand at 2407.426 kb on - strand at 2407.438 kb on - strand at 2407.445 kb on - strand at 2407.448 kb on + strand at 2407.451 kb on + strand at 2407.530 kb on + strand at 2407.531 kb on - strand at 2407.531 kb on - strand at 2407.567 kb on - strand at 2407.601 kb on + strand at 2407.602 kb on - strand at 2407.647 kb on + strand, within CA264_10355 at 2407.648 kb on - strand, within CA264_10355 at 2407.648 kb on - strand, within CA264_10355 at 2407.655 kb on - strand, within CA264_10355 at 2407.657 kb on + strand, within CA264_10355 at 2407.658 kb on - strand, within CA264_10355 at 2407.672 kb on - strand, within CA264_10355 at 2407.680 kb on + strand, within CA264_10355 at 2407.680 kb on + strand, within CA264_10355 at 2407.681 kb on - strand, within CA264_10355 at 2407.683 kb on + strand, within CA264_10355 at 2407.713 kb on - strand, within CA264_10355 at 2407.713 kb on - strand, within CA264_10355 at 2407.800 kb on + strand, within CA264_10355 at 2407.801 kb on - strand, within CA264_10355 at 2407.855 kb on - strand, within CA264_10355 at 2407.875 kb on - strand, within CA264_10355 at 2407.918 kb on + strand, within CA264_10355 at 2407.933 kb on + strand, within CA264_10355 at 2407.934 kb on - strand, within CA264_10355 at 2407.951 kb on + strand, within CA264_10355 at 2408.011 kb on + strand, within CA264_10355 at 2408.013 kb on + strand, within CA264_10355 at 2408.014 kb on - strand, within CA264_10355 at 2408.033 kb on + strand, within CA264_10355 at 2408.054 kb on + strand, within CA264_10355 at 2408.055 kb on - strand, within CA264_10355 at 2408.055 kb on - strand, within CA264_10355 at 2408.082 kb on + strand, within CA264_10355 at 2408.091 kb on + strand, within CA264_10355 at 2408.150 kb on - strand, within CA264_10355 at 2408.164 kb on - strand, within CA264_10355 at 2408.222 kb on + strand, within CA264_10355 at 2408.296 kb on - strand, within CA264_10355 at 2408.309 kb on + strand, within CA264_10355 at 2408.310 kb on - strand, within CA264_10355 at 2408.310 kb on - strand, within CA264_10355 at 2408.330 kb on + strand, within CA264_10355 at 2408.330 kb on + strand, within CA264_10355 at 2408.331 kb on - strand, within CA264_10355 at 2408.411 kb on - strand, within CA264_10355 at 2408.414 kb on - strand, within CA264_10355 at 2408.474 kb on + strand, within CA264_10355 at 2408.508 kb on + strand, within CA264_10355 at 2408.509 kb on - strand, within CA264_10355 at 2408.518 kb on + strand, within CA264_10355 at 2408.602 kb on + strand, within CA264_10355 at 2408.603 kb on - strand, within CA264_10355 at 2408.606 kb on + strand, within CA264_10355 at 2408.606 kb on + strand, within CA264_10355 at 2408.606 kb on + strand, within CA264_10355 at 2408.607 kb on - strand, within CA264_10355 at 2408.607 kb on - strand, within CA264_10355 at 2408.614 kb on + strand, within CA264_10355 at 2408.624 kb on - strand, within CA264_10355 at 2408.671 kb on + strand, within CA264_10355 at 2408.677 kb on - strand, within CA264_10355 at 2408.712 kb on + strand, within CA264_10355 at 2408.713 kb on - strand, within CA264_10355 at 2408.735 kb on + strand, within CA264_10355 at 2408.736 kb on - strand, within CA264_10355 at 2408.807 kb on - strand at 2408.941 kb on - strand at 2408.951 kb on - strand at 2409.225 kb on + strand, within CA264_10360 at 2409.315 kb on + strand, within CA264_10360 at 2409.315 kb on + strand, within CA264_10360 at 2409.315 kb on + strand, within CA264_10360 at 2409.327 kb on + strand, within CA264_10360 at 2409.327 kb on + strand, within CA264_10360 at 2409.427 kb on + strand, within CA264_10360 at 2409.498 kb on + strand, within CA264_10360 at 2409.498 kb on + strand, within CA264_10360 at 2409.498 kb on + strand, within CA264_10360 at 2409.505 kb on + strand, within CA264_10360 at 2409.561 kb on + strand, within CA264_10360 at 2409.645 kb on + strand, within CA264_10360 at 2409.714 kb on + strand, within CA264_10360
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 2,406,517 + CA264_10350 0.42 +0.5 2,406,518 - CA264_10350 0.42 -0.3 2,406,573 - CA264_10350 0.46 +2.2 2,406,576 + CA264_10350 0.46 +0.5 2,406,577 - CA264_10350 0.46 -0.2 2,406,577 - CA264_10350 0.46 -1.0 2,406,581 + CA264_10350 0.46 -2.0 2,406,596 - CA264_10350 0.48 +0.3 2,406,599 + CA264_10350 0.48 +0.8 2,406,600 - CA264_10350 0.48 +0.2 2,406,603 - CA264_10350 0.48 -0.5 2,406,676 - CA264_10350 0.53 +0.5 2,406,692 + CA264_10350 0.54 +0.6 2,406,735 - CA264_10350 0.57 -0.2 2,406,739 + CA264_10350 0.58 +0.0 2,406,739 - CA264_10350 0.58 -0.4 2,406,803 + CA264_10350 0.62 +1.1 2,406,811 + CA264_10350 0.63 -0.3 2,406,811 + CA264_10350 0.63 -0.2 2,406,811 + CA264_10350 0.63 +1.2 2,406,812 - CA264_10350 0.63 -1.4 2,406,812 - CA264_10350 0.63 -0.7 2,406,814 - CA264_10350 0.63 -0.4 2,406,814 - CA264_10350 0.63 +0.6 2,406,841 - CA264_10350 0.65 -0.3 2,406,857 - CA264_10350 0.66 -0.4 2,406,902 - CA264_10350 0.69 -0.4 2,406,923 + CA264_10350 0.71 -0.1 2,406,924 - CA264_10350 0.71 -0.3 2,406,928 + CA264_10350 0.71 +0.0 2,406,929 - CA264_10350 0.71 -0.1 2,406,929 - CA264_10350 0.71 -0.3 2,406,931 - CA264_10350 0.71 +0.0 2,406,931 - CA264_10350 0.71 -0.5 2,406,947 - CA264_10350 0.72 +0.1 2,406,964 - CA264_10350 0.74 +0.1 2,406,968 - CA264_10350 0.74 -0.0 2,406,982 + CA264_10350 0.75 +0.7 2,407,019 + CA264_10350 0.78 +0.2 2,407,019 + CA264_10350 0.78 -0.2 2,407,087 + CA264_10350 0.82 +0.2 2,407,113 + CA264_10350 0.84 +0.9 2,407,113 + CA264_10350 0.84 +0.1 2,407,118 + CA264_10350 0.85 -0.6 2,407,193 + +0.5 2,407,194 - +0.4 2,407,194 - -0.6 2,407,195 + -1.2 2,407,196 - +0.4 2,407,209 + +0.1 2,407,210 - +1.4 2,407,210 - +0.0 2,407,279 - -0.5 2,407,291 - -0.4 2,407,331 + -0.7 2,407,426 - -0.1 2,407,438 - -0.4 2,407,445 - -0.5 2,407,448 + -0.2 2,407,451 + -0.2 2,407,530 + +0.9 2,407,531 - -0.8 2,407,531 - -0.2 2,407,567 - -0.0 2,407,601 + -0.4 2,407,602 - -0.7 2,407,647 + CA264_10355 0.12 +0.1 2,407,648 - CA264_10355 0.12 +0.4 2,407,648 - CA264_10355 0.12 +0.0 2,407,655 - CA264_10355 0.13 +1.4 2,407,657 + CA264_10355 0.13 -0.4 2,407,658 - CA264_10355 0.13 +0.7 2,407,672 - CA264_10355 0.14 -0.1 2,407,680 + CA264_10355 0.14 +0.5 2,407,680 + CA264_10355 0.14 +0.3 2,407,681 - CA264_10355 0.14 +0.3 2,407,683 + CA264_10355 0.15 +0.0 2,407,713 - CA264_10355 0.17 -0.7 2,407,713 - CA264_10355 0.17 -0.2 2,407,800 + CA264_10355 0.22 -1.1 2,407,801 - CA264_10355 0.23 +0.3 2,407,855 - CA264_10355 0.26 +0.1 2,407,875 - CA264_10355 0.28 +0.4 2,407,918 + CA264_10355 0.30 -0.2 2,407,933 + CA264_10355 0.31 +0.2 2,407,934 - CA264_10355 0.32 -0.5 2,407,951 + CA264_10355 0.33 -0.4 2,408,011 + CA264_10355 0.37 -0.5 2,408,013 + CA264_10355 0.37 +0.0 2,408,014 - CA264_10355 0.37 -0.6 2,408,033 + CA264_10355 0.38 +0.4 2,408,054 + CA264_10355 0.40 -1.1 2,408,055 - CA264_10355 0.40 +0.4 2,408,055 - CA264_10355 0.40 -0.3 2,408,082 + CA264_10355 0.42 +1.1 2,408,091 + CA264_10355 0.42 +0.0 2,408,150 - CA264_10355 0.46 -0.5 2,408,164 - CA264_10355 0.47 -0.5 2,408,222 + CA264_10355 0.51 -0.4 2,408,296 - CA264_10355 0.56 -1.4 2,408,309 + CA264_10355 0.57 +0.2 2,408,310 - CA264_10355 0.57 -0.1 2,408,310 - CA264_10355 0.57 -0.2 2,408,330 + CA264_10355 0.58 -1.0 2,408,330 + CA264_10355 0.58 -0.2 2,408,331 - CA264_10355 0.58 -0.7 2,408,411 - CA264_10355 0.64 +0.2 2,408,414 - CA264_10355 0.64 +0.0 2,408,474 + CA264_10355 0.68 +0.4 2,408,508 + CA264_10355 0.70 -0.1 2,408,509 - CA264_10355 0.70 -0.6 2,408,518 + CA264_10355 0.71 -0.9 2,408,602 + CA264_10355 0.77 -0.5 2,408,603 - CA264_10355 0.77 -0.4 2,408,606 + CA264_10355 0.77 -0.7 2,408,606 + CA264_10355 0.77 -0.1 2,408,606 + CA264_10355 0.77 -0.7 2,408,607 - CA264_10355 0.77 +0.1 2,408,607 - CA264_10355 0.77 -1.1 2,408,614 + CA264_10355 0.77 +1.6 2,408,624 - CA264_10355 0.78 -0.9 2,408,671 + CA264_10355 0.81 -0.0 2,408,677 - CA264_10355 0.82 -0.7 2,408,712 + CA264_10355 0.84 -0.1 2,408,713 - CA264_10355 0.84 +0.2 2,408,735 + CA264_10355 0.86 -0.4 2,408,736 - CA264_10355 0.86 -0.6 2,408,807 - -0.7 2,408,941 - -0.0 2,408,951 - -0.1 2,409,225 + CA264_10360 0.19 -2.6 2,409,315 + CA264_10360 0.28 -3.1 2,409,315 + CA264_10360 0.28 -0.6 2,409,315 + CA264_10360 0.28 -2.8 2,409,327 + CA264_10360 0.29 -0.4 2,409,327 + CA264_10360 0.29 -2.5 2,409,427 + CA264_10360 0.39 -1.7 2,409,498 + CA264_10360 0.46 -2.2 2,409,498 + CA264_10360 0.46 -1.8 2,409,498 + CA264_10360 0.46 -0.2 2,409,505 + CA264_10360 0.47 -0.7 2,409,561 + CA264_10360 0.52 -2.5 2,409,645 + CA264_10360 0.61 -1.5 2,409,714 + CA264_10360 0.67 -0.2
Or see this region's nucleotide sequence