Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09215 and CA264_09220 overlap by 4 nucleotides CA264_09220 and CA264_09225 are separated by 201 nucleotides CA264_09225 and CA264_09230 are separated by 3 nucleotides
CA264_09215: CA264_09215 - ferredoxin--NADP(+) reductase, at 2,157,577 to 2,158,593
_09215
CA264_09220: CA264_09220 - ferredoxin, at 2,158,590 to 2,158,913
_09220
CA264_09225: CA264_09225 - Fe-S oxidoreductase, at 2,159,115 to 2,159,855
_09225
CA264_09230: CA264_09230 - hydroxymethylglutaryl-CoA lyase, at 2,159,859 to 2,160,704
_09230
Position (kb)
2159
2160 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2158.122 kb on - strand, within CA264_09215 at 2158.122 kb on - strand, within CA264_09215 at 2158.173 kb on + strand, within CA264_09215 at 2158.173 kb on + strand, within CA264_09215 at 2158.173 kb on + strand, within CA264_09215 at 2158.173 kb on + strand, within CA264_09215 at 2158.174 kb on - strand, within CA264_09215 at 2158.174 kb on - strand, within CA264_09215 at 2158.174 kb on - strand, within CA264_09215 at 2158.210 kb on - strand, within CA264_09215 at 2158.216 kb on - strand, within CA264_09215 at 2158.216 kb on - strand, within CA264_09215 at 2158.216 kb on - strand, within CA264_09215 at 2158.220 kb on + strand, within CA264_09215 at 2158.220 kb on + strand, within CA264_09215 at 2158.221 kb on - strand, within CA264_09215 at 2158.268 kb on + strand, within CA264_09215 at 2158.402 kb on + strand, within CA264_09215 at 2158.426 kb on + strand, within CA264_09215 at 2158.427 kb on - strand, within CA264_09215 at 2158.427 kb on - strand, within CA264_09215 at 2158.427 kb on - strand, within CA264_09215 at 2158.450 kb on + strand, within CA264_09215 at 2158.451 kb on - strand, within CA264_09215 at 2158.472 kb on + strand, within CA264_09215 at 2158.517 kb on - strand at 2158.521 kb on + strand at 2158.522 kb on - strand at 2158.522 kb on - strand at 2158.528 kb on + strand at 2158.536 kb on + strand at 2158.551 kb on - strand at 2158.584 kb on - strand at 2158.603 kb on + strand at 2158.604 kb on - strand at 2158.609 kb on + strand at 2158.609 kb on + strand at 2158.610 kb on - strand at 2158.610 kb on - strand at 2158.611 kb on + strand at 2158.611 kb on + strand at 2158.611 kb on + strand at 2158.611 kb on + strand at 2158.676 kb on + strand, within CA264_09220 at 2158.754 kb on - strand, within CA264_09220 at 2158.803 kb on + strand, within CA264_09220 at 2158.803 kb on + strand, within CA264_09220 at 2158.803 kb on + strand, within CA264_09220 at 2158.804 kb on - strand, within CA264_09220 at 2158.805 kb on + strand, within CA264_09220 at 2158.806 kb on - strand, within CA264_09220 at 2158.806 kb on - strand, within CA264_09220 at 2158.899 kb on - strand at 2159.020 kb on + strand at 2159.021 kb on - strand at 2159.024 kb on - strand at 2159.060 kb on + strand at 2159.061 kb on - strand at 2159.084 kb on + strand at 2159.084 kb on + strand at 2159.110 kb on + strand at 2159.110 kb on + strand at 2159.111 kb on - strand at 2159.113 kb on - strand at 2159.113 kb on - strand at 2159.113 kb on - strand at 2159.113 kb on - strand at 2159.182 kb on + strand at 2159.228 kb on - strand, within CA264_09225 at 2159.256 kb on + strand, within CA264_09225 at 2159.274 kb on - strand, within CA264_09225 at 2159.285 kb on + strand, within CA264_09225 at 2159.286 kb on - strand, within CA264_09225 at 2159.286 kb on - strand, within CA264_09225 at 2159.286 kb on - strand, within CA264_09225 at 2159.310 kb on - strand, within CA264_09225 at 2159.310 kb on - strand, within CA264_09225 at 2159.376 kb on + strand, within CA264_09225 at 2159.377 kb on - strand, within CA264_09225 at 2159.438 kb on - strand, within CA264_09225 at 2159.444 kb on - strand, within CA264_09225 at 2159.477 kb on + strand, within CA264_09225 at 2159.478 kb on - strand, within CA264_09225 at 2159.578 kb on + strand, within CA264_09225 at 2159.626 kb on + strand, within CA264_09225 at 2159.664 kb on - strand, within CA264_09225 at 2159.739 kb on - strand, within CA264_09225 at 2159.740 kb on + strand, within CA264_09225 at 2159.831 kb on + strand at 2159.839 kb on - strand at 2159.855 kb on + strand at 2159.855 kb on + strand at 2159.856 kb on - strand at 2159.863 kb on - strand at 2159.925 kb on + strand at 2160.093 kb on - strand, within CA264_09230 at 2160.093 kb on - strand, within CA264_09230 at 2160.271 kb on + strand, within CA264_09230 at 2160.298 kb on + strand, within CA264_09230 at 2160.298 kb on + strand, within CA264_09230 at 2160.298 kb on + strand, within CA264_09230 at 2160.299 kb on - strand, within CA264_09230 at 2160.302 kb on + strand, within CA264_09230 at 2160.627 kb on - strand at 2160.647 kb on + strand at 2160.651 kb on + strand at 2160.654 kb on - strand at 2160.812 kb on - strand at 2160.819 kb on - strand at 2160.823 kb on + strand at 2160.835 kb on + strand at 2160.835 kb on + strand at 2160.836 kb on - strand at 2160.837 kb on + strand at 2160.845 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 2,158,122 - CA264_09215 0.54 -0.0 2,158,122 - CA264_09215 0.54 -0.7 2,158,173 + CA264_09215 0.59 -0.9 2,158,173 + CA264_09215 0.59 -0.1 2,158,173 + CA264_09215 0.59 +0.1 2,158,173 + CA264_09215 0.59 +0.6 2,158,174 - CA264_09215 0.59 -0.5 2,158,174 - CA264_09215 0.59 +0.4 2,158,174 - CA264_09215 0.59 +0.2 2,158,210 - CA264_09215 0.62 +0.1 2,158,216 - CA264_09215 0.63 +0.7 2,158,216 - CA264_09215 0.63 +0.9 2,158,216 - CA264_09215 0.63 -0.1 2,158,220 + CA264_09215 0.63 +0.0 2,158,220 + CA264_09215 0.63 +0.4 2,158,221 - CA264_09215 0.63 -0.9 2,158,268 + CA264_09215 0.68 -0.3 2,158,402 + CA264_09215 0.81 +1.1 2,158,426 + CA264_09215 0.83 -1.4 2,158,427 - CA264_09215 0.84 +1.3 2,158,427 - CA264_09215 0.84 +0.1 2,158,427 - CA264_09215 0.84 +0.9 2,158,450 + CA264_09215 0.86 +1.2 2,158,451 - CA264_09215 0.86 -0.9 2,158,472 + CA264_09215 0.88 -0.4 2,158,517 - -2.6 2,158,521 + -0.2 2,158,522 - +0.2 2,158,522 - +0.9 2,158,528 + -0.5 2,158,536 + +0.1 2,158,551 - +0.6 2,158,584 - -0.2 2,158,603 + -1.0 2,158,604 - +0.8 2,158,609 + +0.2 2,158,609 + +0.0 2,158,610 - +0.4 2,158,610 - -0.6 2,158,611 + +0.3 2,158,611 + +0.1 2,158,611 + -0.9 2,158,611 + -0.2 2,158,676 + CA264_09220 0.27 -1.3 2,158,754 - CA264_09220 0.51 +0.5 2,158,803 + CA264_09220 0.66 -0.6 2,158,803 + CA264_09220 0.66 +0.2 2,158,803 + CA264_09220 0.66 -0.4 2,158,804 - CA264_09220 0.66 -0.2 2,158,805 + CA264_09220 0.66 -0.2 2,158,806 - CA264_09220 0.67 +0.1 2,158,806 - CA264_09220 0.67 +0.6 2,158,899 - -0.5 2,159,020 + -0.4 2,159,021 - +0.5 2,159,024 - +0.6 2,159,060 + -0.3 2,159,061 - -0.6 2,159,084 + -0.1 2,159,084 + -0.3 2,159,110 + -0.7 2,159,110 + +0.0 2,159,111 - +1.5 2,159,113 - +0.1 2,159,113 - +0.6 2,159,113 - -0.2 2,159,113 - -0.5 2,159,182 + +0.4 2,159,228 - CA264_09225 0.15 +0.3 2,159,256 + CA264_09225 0.19 +0.5 2,159,274 - CA264_09225 0.21 +0.4 2,159,285 + CA264_09225 0.23 +1.7 2,159,286 - CA264_09225 0.23 +0.0 2,159,286 - CA264_09225 0.23 +0.0 2,159,286 - CA264_09225 0.23 -0.2 2,159,310 - CA264_09225 0.26 -1.0 2,159,310 - CA264_09225 0.26 -0.3 2,159,376 + CA264_09225 0.35 -0.0 2,159,377 - CA264_09225 0.35 -0.2 2,159,438 - CA264_09225 0.44 -1.7 2,159,444 - CA264_09225 0.44 -0.3 2,159,477 + CA264_09225 0.49 -0.2 2,159,478 - CA264_09225 0.49 +0.5 2,159,578 + CA264_09225 0.62 -0.0 2,159,626 + CA264_09225 0.69 -1.3 2,159,664 - CA264_09225 0.74 +0.1 2,159,739 - CA264_09225 0.84 -0.1 2,159,740 + CA264_09225 0.84 +0.3 2,159,831 + +2.0 2,159,839 - +0.2 2,159,855 + -1.3 2,159,855 + -0.4 2,159,856 - -0.3 2,159,863 - +0.1 2,159,925 + -0.8 2,160,093 - CA264_09230 0.28 -0.6 2,160,093 - CA264_09230 0.28 +1.5 2,160,271 + CA264_09230 0.49 -0.4 2,160,298 + CA264_09230 0.52 -1.4 2,160,298 + CA264_09230 0.52 -0.9 2,160,298 + CA264_09230 0.52 +0.6 2,160,299 - CA264_09230 0.52 -1.2 2,160,302 + CA264_09230 0.52 +1.7 2,160,627 - -0.5 2,160,647 + -0.8 2,160,651 + +0.4 2,160,654 - +1.0 2,160,812 - -0.9 2,160,819 - -0.1 2,160,823 + -0.1 2,160,835 + -0.4 2,160,835 + -0.1 2,160,836 - +0.0 2,160,837 + +0.2 2,160,845 + +1.1
Or see this region's nucleotide sequence