Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07310 and CA264_07315 overlap by 4 nucleotides CA264_07315 and CA264_07320 are separated by 134 nucleotides CA264_07320 and CA264_07325 are separated by 73 nucleotides CA264_07325 and CA264_07330 are separated by 77 nucleotides
CA264_07310: CA264_07310 - two-component sensor histidine kinase, at 1,689,406 to 1,690,668
_07310
CA264_07315: CA264_07315 - DNA-binding response regulator, at 1,690,665 to 1,691,342
_07315
CA264_07320: CA264_07320 - arsenical-resistance protein, at 1,691,477 to 1,692,559
_07320
CA264_07325: CA264_07325 - YfcE family phosphodiesterase, at 1,692,633 to 1,693,409
_07325
CA264_07330: CA264_07330 - hypothetical protein, at 1,693,487 to 1,694,017
_07330
Position (kb)
1691
1692
1693 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1690.590 kb on - strand at 1690.590 kb on - strand at 1690.637 kb on + strand at 1690.637 kb on + strand at 1690.637 kb on + strand at 1690.637 kb on + strand at 1690.637 kb on + strand at 1690.640 kb on + strand at 1690.640 kb on + strand at 1690.640 kb on + strand at 1690.682 kb on + strand at 1690.696 kb on + strand at 1690.711 kb on + strand at 1690.711 kb on + strand at 1690.755 kb on - strand, within CA264_07315 at 1690.836 kb on - strand, within CA264_07315 at 1690.839 kb on + strand, within CA264_07315 at 1690.864 kb on + strand, within CA264_07315 at 1690.865 kb on - strand, within CA264_07315 at 1690.957 kb on - strand, within CA264_07315 at 1691.134 kb on + strand, within CA264_07315 at 1691.134 kb on + strand, within CA264_07315 at 1691.187 kb on + strand, within CA264_07315 at 1691.188 kb on - strand, within CA264_07315 at 1691.287 kb on + strand at 1691.328 kb on + strand at 1691.342 kb on + strand at 1691.373 kb on + strand at 1691.503 kb on + strand at 1691.503 kb on + strand at 1691.509 kb on + strand at 1691.509 kb on + strand at 1691.510 kb on - strand at 1691.656 kb on + strand, within CA264_07320 at 1691.754 kb on + strand, within CA264_07320 at 1691.754 kb on + strand, within CA264_07320 at 1691.755 kb on - strand, within CA264_07320 at 1691.755 kb on - strand, within CA264_07320 at 1691.796 kb on - strand, within CA264_07320 at 1691.796 kb on - strand, within CA264_07320 at 1691.796 kb on - strand, within CA264_07320 at 1691.801 kb on + strand, within CA264_07320 at 1691.801 kb on + strand, within CA264_07320 at 1691.802 kb on - strand, within CA264_07320 at 1691.802 kb on - strand, within CA264_07320 at 1691.825 kb on - strand, within CA264_07320 at 1691.863 kb on + strand, within CA264_07320 at 1691.960 kb on + strand, within CA264_07320 at 1691.962 kb on + strand, within CA264_07320 at 1691.963 kb on - strand, within CA264_07320 at 1691.966 kb on + strand, within CA264_07320 at 1691.966 kb on + strand, within CA264_07320 at 1691.966 kb on + strand, within CA264_07320 at 1691.966 kb on + strand, within CA264_07320 at 1691.966 kb on + strand, within CA264_07320 at 1691.966 kb on + strand, within CA264_07320 at 1691.967 kb on - strand, within CA264_07320 at 1691.967 kb on - strand, within CA264_07320 at 1691.967 kb on - strand, within CA264_07320 at 1691.967 kb on - strand, within CA264_07320 at 1691.967 kb on - strand, within CA264_07320 at 1691.970 kb on + strand, within CA264_07320 at 1691.970 kb on + strand, within CA264_07320 at 1691.971 kb on - strand, within CA264_07320 at 1691.971 kb on - strand, within CA264_07320 at 1692.011 kb on + strand, within CA264_07320 at 1692.027 kb on - strand, within CA264_07320 at 1692.029 kb on - strand, within CA264_07320 at 1692.029 kb on - strand, within CA264_07320 at 1692.036 kb on + strand, within CA264_07320 at 1692.055 kb on + strand, within CA264_07320 at 1692.063 kb on + strand, within CA264_07320 at 1692.063 kb on + strand, within CA264_07320 at 1692.064 kb on - strand, within CA264_07320 at 1692.069 kb on + strand, within CA264_07320 at 1692.069 kb on + strand, within CA264_07320 at 1692.070 kb on - strand, within CA264_07320 at 1692.078 kb on + strand, within CA264_07320 at 1692.126 kb on + strand, within CA264_07320 at 1692.201 kb on - strand, within CA264_07320 at 1692.213 kb on + strand, within CA264_07320 at 1692.214 kb on - strand, within CA264_07320 at 1692.363 kb on + strand, within CA264_07320 at 1692.363 kb on + strand, within CA264_07320 at 1692.395 kb on + strand, within CA264_07320 at 1692.453 kb on + strand at 1692.505 kb on - strand at 1692.537 kb on + strand at 1692.538 kb on - strand at 1692.542 kb on - strand at 1692.567 kb on + strand at 1692.637 kb on + strand at 1692.637 kb on + strand at 1692.638 kb on - strand at 1692.716 kb on - strand, within CA264_07325 at 1692.726 kb on + strand, within CA264_07325 at 1692.728 kb on + strand, within CA264_07325 at 1692.729 kb on - strand, within CA264_07325 at 1692.741 kb on + strand, within CA264_07325 at 1692.794 kb on - strand, within CA264_07325 at 1692.818 kb on + strand, within CA264_07325 at 1692.818 kb on + strand, within CA264_07325 at 1692.855 kb on - strand, within CA264_07325 at 1692.855 kb on - strand, within CA264_07325 at 1692.855 kb on - strand, within CA264_07325 at 1692.856 kb on + strand, within CA264_07325 at 1692.991 kb on + strand, within CA264_07325 at 1693.222 kb on + strand, within CA264_07325 at 1693.223 kb on - strand, within CA264_07325 at 1693.226 kb on + strand, within CA264_07325 at 1693.292 kb on - strand, within CA264_07325 at 1693.316 kb on - strand, within CA264_07325 at 1693.316 kb on - strand, within CA264_07325 at 1693.316 kb on - strand, within CA264_07325 at 1693.371 kb on + strand at 1693.427 kb on - strand at 1693.549 kb on + strand, within CA264_07330 at 1693.549 kb on + strand, within CA264_07330 at 1693.550 kb on - strand, within CA264_07330 at 1693.550 kb on - strand, within CA264_07330
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 1,690,590 - -0.8 1,690,590 - -0.3 1,690,637 + +0.2 1,690,637 + -0.1 1,690,637 + -0.7 1,690,637 + -0.1 1,690,637 + -0.0 1,690,640 + +0.4 1,690,640 + +1.3 1,690,640 + -0.4 1,690,682 + -2.4 1,690,696 + -0.3 1,690,711 + -0.6 1,690,711 + +0.2 1,690,755 - CA264_07315 0.13 +0.1 1,690,836 - CA264_07315 0.25 +0.4 1,690,839 + CA264_07315 0.26 +0.3 1,690,864 + CA264_07315 0.29 +0.6 1,690,865 - CA264_07315 0.29 -2.9 1,690,957 - CA264_07315 0.43 +0.2 1,691,134 + CA264_07315 0.69 +1.1 1,691,134 + CA264_07315 0.69 -0.7 1,691,187 + CA264_07315 0.77 +0.1 1,691,188 - CA264_07315 0.77 -0.0 1,691,287 + -0.2 1,691,328 + +0.4 1,691,342 + -0.1 1,691,373 + +0.1 1,691,503 + -1.3 1,691,503 + -0.6 1,691,509 + +1.4 1,691,509 + +0.2 1,691,510 - -0.2 1,691,656 + CA264_07320 0.17 -0.2 1,691,754 + CA264_07320 0.26 -0.0 1,691,754 + CA264_07320 0.26 -0.5 1,691,755 - CA264_07320 0.26 +0.4 1,691,755 - CA264_07320 0.26 -0.6 1,691,796 - CA264_07320 0.29 +0.5 1,691,796 - CA264_07320 0.29 +1.1 1,691,796 - CA264_07320 0.29 -1.1 1,691,801 + CA264_07320 0.30 -0.1 1,691,801 + CA264_07320 0.30 -0.8 1,691,802 - CA264_07320 0.30 -0.2 1,691,802 - CA264_07320 0.30 +0.0 1,691,825 - CA264_07320 0.32 +0.1 1,691,863 + CA264_07320 0.36 +0.1 1,691,960 + CA264_07320 0.45 -0.2 1,691,962 + CA264_07320 0.45 +0.2 1,691,963 - CA264_07320 0.45 -0.2 1,691,966 + CA264_07320 0.45 -0.2 1,691,966 + CA264_07320 0.45 -0.0 1,691,966 + CA264_07320 0.45 +0.5 1,691,966 + CA264_07320 0.45 -0.0 1,691,966 + CA264_07320 0.45 -0.0 1,691,966 + CA264_07320 0.45 +0.3 1,691,967 - CA264_07320 0.45 -0.6 1,691,967 - CA264_07320 0.45 +1.4 1,691,967 - CA264_07320 0.45 -0.8 1,691,967 - CA264_07320 0.45 +0.5 1,691,967 - CA264_07320 0.45 -0.6 1,691,970 + CA264_07320 0.46 +0.4 1,691,970 + CA264_07320 0.46 +0.0 1,691,971 - CA264_07320 0.46 +0.0 1,691,971 - CA264_07320 0.46 -0.7 1,692,011 + CA264_07320 0.49 -1.0 1,692,027 - CA264_07320 0.51 -0.3 1,692,029 - CA264_07320 0.51 -0.7 1,692,029 - CA264_07320 0.51 -0.4 1,692,036 + CA264_07320 0.52 -0.7 1,692,055 + CA264_07320 0.53 +0.9 1,692,063 + CA264_07320 0.54 -0.7 1,692,063 + CA264_07320 0.54 +0.1 1,692,064 - CA264_07320 0.54 -0.4 1,692,069 + CA264_07320 0.55 -0.7 1,692,069 + CA264_07320 0.55 -0.8 1,692,070 - CA264_07320 0.55 -1.3 1,692,078 + CA264_07320 0.55 -0.8 1,692,126 + CA264_07320 0.60 -0.5 1,692,201 - CA264_07320 0.67 -1.1 1,692,213 + CA264_07320 0.68 -0.4 1,692,214 - CA264_07320 0.68 -0.0 1,692,363 + CA264_07320 0.82 +0.5 1,692,363 + CA264_07320 0.82 +1.1 1,692,395 + CA264_07320 0.85 -0.3 1,692,453 + -0.2 1,692,505 - +0.9 1,692,537 + -1.1 1,692,538 - +0.2 1,692,542 - -0.2 1,692,567 + +0.3 1,692,637 + +0.5 1,692,637 + -0.1 1,692,638 - -0.2 1,692,716 - CA264_07325 0.11 -0.1 1,692,726 + CA264_07325 0.12 +0.0 1,692,728 + CA264_07325 0.12 +0.3 1,692,729 - CA264_07325 0.12 +0.5 1,692,741 + CA264_07325 0.14 +0.2 1,692,794 - CA264_07325 0.21 -0.2 1,692,818 + CA264_07325 0.24 -0.7 1,692,818 + CA264_07325 0.24 -0.5 1,692,855 - CA264_07325 0.29 +0.2 1,692,855 - CA264_07325 0.29 +0.9 1,692,855 - CA264_07325 0.29 -0.5 1,692,856 + CA264_07325 0.29 +0.2 1,692,991 + CA264_07325 0.46 +0.2 1,693,222 + CA264_07325 0.76 -0.4 1,693,223 - CA264_07325 0.76 -1.1 1,693,226 + CA264_07325 0.76 +0.7 1,693,292 - CA264_07325 0.85 -0.4 1,693,316 - CA264_07325 0.88 -0.4 1,693,316 - CA264_07325 0.88 -0.7 1,693,316 - CA264_07325 0.88 -0.7 1,693,371 + -0.4 1,693,427 - -0.9 1,693,549 + CA264_07330 0.12 +0.3 1,693,549 + CA264_07330 0.12 -0.7 1,693,550 - CA264_07330 0.12 +0.2 1,693,550 - CA264_07330 0.12 -0.4
Or see this region's nucleotide sequence