Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06800 and CA264_06805 are separated by 4 nucleotides CA264_06805 and CA264_06810 overlap by 10 nucleotides CA264_06810 and CA264_06815 are separated by 209 nucleotides
CA264_06800: CA264_06800 - hypothetical protein, at 1,571,071 to 1,572,378
_06800
CA264_06805: CA264_06805 - hypothetical protein, at 1,572,383 to 1,573,201
_06805
CA264_06810: CA264_06810 - hypothetical protein, at 1,573,192 to 1,573,701
_06810
CA264_06815: CA264_06815 - iron-sulfur cluster repair di-iron protein, at 1,573,911 to 1,574,867
_06815
Position (kb)
1573
1574 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1572.214 kb on + strand, within CA264_06800 at 1572.249 kb on - strand at 1572.346 kb on - strand at 1572.357 kb on + strand at 1572.387 kb on - strand at 1572.391 kb on + strand at 1572.393 kb on + strand at 1572.393 kb on + strand at 1572.393 kb on + strand at 1572.540 kb on - strand, within CA264_06805 at 1572.544 kb on + strand, within CA264_06805 at 1572.544 kb on + strand, within CA264_06805 at 1572.545 kb on - strand, within CA264_06805 at 1572.616 kb on + strand, within CA264_06805 at 1572.617 kb on - strand, within CA264_06805 at 1572.775 kb on + strand, within CA264_06805 at 1572.869 kb on + strand, within CA264_06805 at 1572.870 kb on - strand, within CA264_06805 at 1572.870 kb on - strand, within CA264_06805 at 1572.872 kb on - strand, within CA264_06805 at 1572.892 kb on + strand, within CA264_06805 at 1572.893 kb on - strand, within CA264_06805 at 1572.939 kb on - strand, within CA264_06805 at 1572.939 kb on - strand, within CA264_06805 at 1572.942 kb on - strand, within CA264_06805 at 1572.942 kb on - strand, within CA264_06805 at 1573.142 kb on + strand at 1573.143 kb on - strand at 1573.194 kb on - strand at 1573.264 kb on - strand, within CA264_06810 at 1573.429 kb on + strand, within CA264_06810 at 1573.430 kb on - strand, within CA264_06810 at 1573.539 kb on + strand, within CA264_06810 at 1573.715 kb on + strand at 1573.716 kb on - strand at 1573.761 kb on - strand at 1573.765 kb on - strand at 1573.912 kb on + strand at 1573.913 kb on - strand at 1573.920 kb on + strand at 1574.007 kb on + strand, within CA264_06815 at 1574.024 kb on + strand, within CA264_06815 at 1574.027 kb on + strand, within CA264_06815 at 1574.027 kb on + strand, within CA264_06815 at 1574.027 kb on + strand, within CA264_06815 at 1574.027 kb on + strand, within CA264_06815 at 1574.027 kb on + strand, within CA264_06815 at 1574.028 kb on - strand, within CA264_06815 at 1574.029 kb on + strand, within CA264_06815 at 1574.029 kb on + strand, within CA264_06815 at 1574.030 kb on - strand, within CA264_06815 at 1574.030 kb on - strand, within CA264_06815 at 1574.030 kb on - strand, within CA264_06815 at 1574.059 kb on + strand, within CA264_06815 at 1574.060 kb on - strand, within CA264_06815 at 1574.060 kb on - strand, within CA264_06815 at 1574.063 kb on + strand, within CA264_06815 at 1574.172 kb on + strand, within CA264_06815 at 1574.172 kb on + strand, within CA264_06815 at 1574.175 kb on - strand, within CA264_06815 at 1574.284 kb on - strand, within CA264_06815 at 1574.338 kb on + strand, within CA264_06815 at 1574.367 kb on + strand, within CA264_06815 at 1574.368 kb on - strand, within CA264_06815 at 1574.371 kb on + strand, within CA264_06815 at 1574.371 kb on + strand, within CA264_06815 at 1574.372 kb on - strand, within CA264_06815 at 1574.395 kb on + strand, within CA264_06815 at 1574.395 kb on + strand, within CA264_06815 at 1574.396 kb on - strand, within CA264_06815 at 1574.564 kb on + strand, within CA264_06815 at 1574.565 kb on - strand, within CA264_06815 at 1574.569 kb on - strand, within CA264_06815 at 1574.678 kb on - strand, within CA264_06815
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 1,572,214 + CA264_06800 0.87 -1.1 1,572,249 - -1.0 1,572,346 - -0.4 1,572,357 + +0.5 1,572,387 - +1.8 1,572,391 + -0.3 1,572,393 + -0.3 1,572,393 + -0.4 1,572,393 + -0.9 1,572,540 - CA264_06805 0.19 -0.2 1,572,544 + CA264_06805 0.20 -0.1 1,572,544 + CA264_06805 0.20 -0.1 1,572,545 - CA264_06805 0.20 +0.5 1,572,616 + CA264_06805 0.28 -0.9 1,572,617 - CA264_06805 0.29 -1.0 1,572,775 + CA264_06805 0.48 -0.7 1,572,869 + CA264_06805 0.59 +0.1 1,572,870 - CA264_06805 0.59 +1.2 1,572,870 - CA264_06805 0.59 -1.8 1,572,872 - CA264_06805 0.60 +0.2 1,572,892 + CA264_06805 0.62 -0.3 1,572,893 - CA264_06805 0.62 -0.8 1,572,939 - CA264_06805 0.68 +1.0 1,572,939 - CA264_06805 0.68 -0.8 1,572,942 - CA264_06805 0.68 +2.0 1,572,942 - CA264_06805 0.68 +0.4 1,573,142 + +1.0 1,573,143 - +0.3 1,573,194 - +0.4 1,573,264 - CA264_06810 0.14 +0.3 1,573,429 + CA264_06810 0.46 +1.8 1,573,430 - CA264_06810 0.47 +0.5 1,573,539 + CA264_06810 0.68 -0.1 1,573,715 + -0.1 1,573,716 - +1.3 1,573,761 - -0.3 1,573,765 - -0.5 1,573,912 + -0.2 1,573,913 - +0.4 1,573,920 + -0.8 1,574,007 + CA264_06815 0.10 -0.2 1,574,024 + CA264_06815 0.12 -1.1 1,574,027 + CA264_06815 0.12 -0.3 1,574,027 + CA264_06815 0.12 -0.5 1,574,027 + CA264_06815 0.12 +0.6 1,574,027 + CA264_06815 0.12 -0.5 1,574,027 + CA264_06815 0.12 -0.7 1,574,028 - CA264_06815 0.12 -0.3 1,574,029 + CA264_06815 0.12 +0.8 1,574,029 + CA264_06815 0.12 -0.2 1,574,030 - CA264_06815 0.12 -0.9 1,574,030 - CA264_06815 0.12 -0.8 1,574,030 - CA264_06815 0.12 -0.4 1,574,059 + CA264_06815 0.15 +0.2 1,574,060 - CA264_06815 0.16 -0.6 1,574,060 - CA264_06815 0.16 +0.8 1,574,063 + CA264_06815 0.16 -1.0 1,574,172 + CA264_06815 0.27 -0.8 1,574,172 + CA264_06815 0.27 -0.3 1,574,175 - CA264_06815 0.28 +0.6 1,574,284 - CA264_06815 0.39 -0.1 1,574,338 + CA264_06815 0.45 +0.3 1,574,367 + CA264_06815 0.48 +0.2 1,574,368 - CA264_06815 0.48 +0.1 1,574,371 + CA264_06815 0.48 +0.5 1,574,371 + CA264_06815 0.48 -0.3 1,574,372 - CA264_06815 0.48 -0.6 1,574,395 + CA264_06815 0.51 -0.1 1,574,395 + CA264_06815 0.51 -1.2 1,574,396 - CA264_06815 0.51 +0.1 1,574,564 + CA264_06815 0.68 +0.1 1,574,565 - CA264_06815 0.68 +0.2 1,574,569 - CA264_06815 0.69 +0.8 1,574,678 - CA264_06815 0.80 -1.6
Or see this region's nucleotide sequence