Experiment: L-Methionine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS30630 and ABIE40_RS30635 are separated by 709 nucleotides
ABIE40_RS30630: ABIE40_RS30630 - hypothetical protein, at 817,117 to 817,758
_RS30630
ABIE40_RS30635: ABIE40_RS30635 - helix-turn-helix domain-containing protein, at 818,468 to 818,821
_RS30635
Position (kb) 818
819 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 817.572 kb on + strand, within ABIE40_RS30630 at 817.573 kb on - strand, within ABIE40_RS30630 at 817.579 kb on - strand, within ABIE40_RS30630 at 817.582 kb on + strand, within ABIE40_RS30630 at 817.583 kb on - strand, within ABIE40_RS30630 at 817.583 kb on - strand, within ABIE40_RS30630 at 817.761 kb on - strand at 817.779 kb on - strand at 817.977 kb on + strand at 817.978 kb on - strand at 817.978 kb on - strand at 817.981 kb on + strand at 817.982 kb on - strand at 818.182 kb on - strand at 818.317 kb on + strand at 818.317 kb on + strand at 818.318 kb on - strand at 818.319 kb on + strand at 818.320 kb on - strand at 818.320 kb on - strand at 818.359 kb on + strand at 818.363 kb on - strand at 818.444 kb on - strand at 818.611 kb on + strand, within ABIE40_RS30635 at 818.681 kb on + strand, within ABIE40_RS30635 at 818.681 kb on + strand, within ABIE40_RS30635 at 818.682 kb on - strand, within ABIE40_RS30635 at 818.732 kb on - strand, within ABIE40_RS30635 at 818.783 kb on - strand, within ABIE40_RS30635 at 818.898 kb on + strand at 819.050 kb on + strand at 819.160 kb on + strand at 819.162 kb on + strand at 819.221 kb on + strand at 819.222 kb on - strand at 819.397 kb on - strand at 819.560 kb on + strand at 819.561 kb on - strand at 819.594 kb on - strand at 819.594 kb on - strand at 819.610 kb on + strand at 819.610 kb on + strand at 819.611 kb on - strand at 819.642 kb on + strand at 819.644 kb on + strand at 819.691 kb on - strand at 819.691 kb on - strand at 819.755 kb on + strand at 819.756 kb on - strand at 819.757 kb on + strand at 819.758 kb on - strand at 819.758 kb on - strand at 819.791 kb on - strand at 819.810 kb on + strand at 819.811 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Methionine (C) remove 817,572 + ABIE40_RS30630 0.71 +0.3 817,573 - ABIE40_RS30630 0.71 -0.6 817,579 - ABIE40_RS30630 0.72 -0.2 817,582 + ABIE40_RS30630 0.72 +1.5 817,583 - ABIE40_RS30630 0.73 -0.6 817,583 - ABIE40_RS30630 0.73 +1.4 817,761 - -0.7 817,779 - +1.6 817,977 + -0.5 817,978 - -0.5 817,978 - +1.5 817,981 + +0.6 817,982 - -1.1 818,182 - +1.6 818,317 + +1.2 818,317 + -0.3 818,318 - -0.0 818,319 + -0.4 818,320 - -2.9 818,320 - +0.4 818,359 + +0.5 818,363 - -0.2 818,444 - -2.4 818,611 + ABIE40_RS30635 0.40 -0.8 818,681 + ABIE40_RS30635 0.60 -1.3 818,681 + ABIE40_RS30635 0.60 -1.0 818,682 - ABIE40_RS30635 0.60 -1.9 818,732 - ABIE40_RS30635 0.75 -1.7 818,783 - ABIE40_RS30635 0.89 -0.2 818,898 + +1.1 819,050 + +0.2 819,160 + +0.6 819,162 + -0.9 819,221 + -2.0 819,222 - +1.6 819,397 - -0.9 819,560 + -0.9 819,561 - -0.3 819,594 - +0.7 819,594 - -0.8 819,610 + -1.6 819,610 + -0.1 819,611 - -2.3 819,642 + -1.9 819,644 + -0.3 819,691 - +0.5 819,691 - +0.7 819,755 + -0.7 819,756 - -0.9 819,757 + -0.0 819,758 - -2.0 819,758 - -0.7 819,791 - +1.1 819,810 + +0.8 819,811 - -1.7
Or see this region's nucleotide sequence