Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS13950

Experiment: L-Methionine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Methionine (C)
2,724,015	+		ABIE40_RS13945	0.29	+1.6
2,724,015	+		ABIE40_RS13945	0.29	+0.1
2,724,016	-		ABIE40_RS13945	0.29	+0.4
2,724,016	-		ABIE40_RS13945	0.29	-0.1
2,724,042	+		ABIE40_RS13945	0.32	-0.2
2,724,043	-		ABIE40_RS13945	0.32	+0.3
2,724,068	+		ABIE40_RS13945	0.34	-0.5
2,724,068	+		ABIE40_RS13945	0.34	+1.3
2,724,068	+		ABIE40_RS13945	0.34	-1.2
2,724,069	-		ABIE40_RS13945	0.35	-0.7
2,724,069	-		ABIE40_RS13945	0.35	+0.2
2,724,262	+		ABIE40_RS13945	0.54	+1.6
2,724,262	+		ABIE40_RS13945	0.54	-0.4
2,724,497	+		ABIE40_RS13945	0.77	-2.0
2,724,498	-		ABIE40_RS13945	0.77	-0.5
2,724,499	+		ABIE40_RS13945	0.77	-0.3
2,724,500	-		ABIE40_RS13945	0.77	-3.1
2,724,500	-		ABIE40_RS13945	0.77	-0.7
2,724,692	+				+0.3
2,724,791	-				-1.2
2,724,806	+				-1.2
2,724,807	-				-2.1
2,724,807	-				-2.3
2,724,812	-				-1.2
2,724,822	+				-0.6
2,724,823	-				-2.3
2,724,824	+				+0.1
2,724,825	-				-0.0
2,724,834	+				-1.6
2,724,894	+				-0.4
2,724,894	+				-0.6
2,724,894	+				-1.6
2,724,895	+				+0.8
2,724,895	-				-0.0
2,724,895	-				-1.9
2,724,895	-				-1.6
2,724,918	+				-1.2
2,724,919	-				-1.0
2,724,919	-				-0.9
2,724,922	+				-0.7
2,724,922	+				-0.8
2,724,923	-				-0.5
2,724,923	-				+0.0
2,724,931	+				-2.0
2,724,931	+				-1.1
2,724,932	-				-1.6
2,724,980	+				-0.2
2,724,980	+				-0.2
2,724,981	-				-0.8
2,724,983	+				-2.2
2,724,983	+				-0.2
2,724,984	-				-0.8
2,725,011	+				-0.3
2,725,058	+				-1.0
2,725,059	-				-2.7
2,725,189	+		ABIE40_RS13950	0.18	-0.8
2,725,190	-		ABIE40_RS13950	0.18	-0.3
2,725,339	+		ABIE40_RS13950	0.32	-3.2
2,725,340	-		ABIE40_RS13950	0.32	-1.7
2,725,340	-		ABIE40_RS13950	0.32	-1.6
2,725,375	+		ABIE40_RS13950	0.35	-1.5
2,725,376	-		ABIE40_RS13950	0.35	-1.1
2,725,378	+		ABIE40_RS13950	0.35	-0.9
2,725,378	+		ABIE40_RS13950	0.35	-3.0
2,725,378	+		ABIE40_RS13950	0.35	-0.6
2,725,378	+		ABIE40_RS13950	0.35	-0.9
2,725,379	-		ABIE40_RS13950	0.36	-1.4
2,725,379	-		ABIE40_RS13950	0.36	-0.5
2,725,379	-		ABIE40_RS13950	0.36	-1.0
2,725,379	-		ABIE40_RS13950	0.36	-2.3
2,725,379	-		ABIE40_RS13950	0.36	-2.3
2,725,513	+		ABIE40_RS13950	0.48	-1.6
2,725,519	+		ABIE40_RS13950	0.49	-1.6
2,725,519	+		ABIE40_RS13950	0.49	-1.4
2,725,519	+		ABIE40_RS13950	0.49	+0.6
2,725,519	+		ABIE40_RS13950	0.49	-1.2
2,725,519	+		ABIE40_RS13950	0.49	-1.7
2,725,519	+		ABIE40_RS13950	0.49	-1.4
2,725,519	+		ABIE40_RS13950	0.49	-1.6
2,725,520	-		ABIE40_RS13950	0.49	+0.8
2,725,520	-		ABIE40_RS13950	0.49	-2.0
2,725,520	-		ABIE40_RS13950	0.49	-1.2
2,725,520	-		ABIE40_RS13950	0.49	-1.3
2,725,549	+		ABIE40_RS13950	0.52	-2.8
2,725,549	+		ABIE40_RS13950	0.52	-1.2
2,725,549	+		ABIE40_RS13950	0.52	-1.6
2,725,549	+		ABIE40_RS13950	0.52	-1.2
2,725,549	+		ABIE40_RS13950	0.52	-1.6
2,725,550	-		ABIE40_RS13950	0.52	-2.6
2,725,550	-		ABIE40_RS13950	0.52	-3.5
2,725,550	-		ABIE40_RS13950	0.52	-2.5
2,725,550	-		ABIE40_RS13950	0.52	-2.0
2,725,550	-		ABIE40_RS13950	0.52	-2.3
2,725,550	-		ABIE40_RS13950	0.52	-1.7
2,725,550	-		ABIE40_RS13950	0.52	-0.4
2,725,574	+		ABIE40_RS13950	0.54	-1.1
2,725,574	+		ABIE40_RS13950	0.54	-1.2
2,725,575	-		ABIE40_RS13950	0.54	-1.0
2,725,669	+		ABIE40_RS13950	0.63	-1.8
2,725,669	+		ABIE40_RS13950	0.63	-3.0
2,725,669	+		ABIE40_RS13950	0.63	-0.6
2,725,670	-		ABIE40_RS13950	0.63	-2.7
2,725,670	-		ABIE40_RS13950	0.63	-0.9
2,725,705	+		ABIE40_RS13950	0.66	-1.6
2,725,705	+		ABIE40_RS13950	0.66	-1.6
2,725,705	+		ABIE40_RS13950	0.66	-1.2
2,725,840	+		ABIE40_RS13950	0.79	-1.7
2,725,840	+		ABIE40_RS13950	0.79	-2.5
2,725,840	+		ABIE40_RS13950	0.79	-1.2
2,725,841	-		ABIE40_RS13950	0.79	-1.7
2,725,841	-		ABIE40_RS13950	0.79	-0.8
2,725,875	+		ABIE40_RS13950	0.82	-2.1
2,725,875	+		ABIE40_RS13950	0.82	-2.8
2,725,876	-		ABIE40_RS13950	0.82	-2.6
2,725,945	+		ABIE40_RS13950	0.89	-2.2
2,725,945	+		ABIE40_RS13950	0.89	-0.6
2,725,946	-		ABIE40_RS13950	0.89	-0.6
2,725,991	+				-1.5
2,725,992	-				-0.0
2,726,011	+				-1.4
2,726,011	+				-2.0
2,726,011	+				-0.5
2,726,011	+				-1.7
2,726,011	+				-0.2
2,726,011	+				-0.6
2,726,012	-				-1.2
2,726,012	-				+1.9
2,726,012	-				-1.2
2,726,012	-				-3.2
2,726,012	-				-1.2
2,726,012	-				-1.1
2,726,012	-				-2.1
2,726,039	-				-3.2
2,726,041	+				-0.4
2,726,041	+				-1.1
2,726,041	+				-1.4
2,726,062	+				-0.9
2,726,063	-				-2.3
2,726,063	-				-3.8
2,726,116	+				-2.6
2,726,117	-				-1.9
2,726,117	-				-1.9
2,726,170	+				-2.1
2,726,170	+				-2.7
2,726,170	+				-1.1
2,726,170	+				-0.8
2,726,171	-				-1.1
2,726,171	-				-1.7
2,726,171	-				-1.4
2,726,171	-				-1.6
2,726,339	+		ABIE40_RS13955	0.12	-1.8
2,726,339	+		ABIE40_RS13955	0.12	-2.0
2,726,339	+		ABIE40_RS13955	0.12	-3.5
2,726,339	+		ABIE40_RS13955	0.12	-0.8
2,726,339	+		ABIE40_RS13955	0.12	-0.8
2,726,340	-		ABIE40_RS13955	0.12	-2.1
2,726,340	-		ABIE40_RS13955	0.12	-4.3
2,726,340	-		ABIE40_RS13955	0.12	-1.2
2,726,340	-		ABIE40_RS13955	0.12	-1.9
2,726,357	+		ABIE40_RS13955	0.13	-2.3
2,726,358	-		ABIE40_RS13955	0.13	-1.4
2,726,358	-		ABIE40_RS13955	0.13	-1.8
2,726,531	-		ABIE40_RS13955	0.24	-1.0
2,726,575	+		ABIE40_RS13955	0.27	-1.6
2,726,575	+		ABIE40_RS13955	0.27	-2.9
2,726,575	+		ABIE40_RS13955	0.27	-1.0
2,726,576	-		ABIE40_RS13955	0.27	-2.0
2,726,883	-		ABIE40_RS13955	0.47	-2.4
2,726,970	-		ABIE40_RS13955	0.53	+1.6
2,726,970	-		ABIE40_RS13955	0.53	+1.6
2,726,970	-		ABIE40_RS13955	0.53	-2.0