Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS06230

Experiment: L-Methionine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Methionine (C)
1,220,756	+				-0.7
1,220,757	-				-0.2
1,220,841	+		ABIE40_RS06225	0.14	-1.3
1,220,841	+		ABIE40_RS06225	0.14	+2.3
1,220,841	+		ABIE40_RS06225	0.14	-2.3
1,220,842	-		ABIE40_RS06225	0.14	-2.4
1,220,842	-		ABIE40_RS06225	0.14	-0.6
1,220,842	-		ABIE40_RS06225	0.14	-1.3
1,220,842	-		ABIE40_RS06225	0.14	-1.0
1,220,842	-		ABIE40_RS06225	0.14	+0.4
1,220,986	-		ABIE40_RS06225	0.29	+0.1
1,220,986	-		ABIE40_RS06225	0.29	-0.9
1,221,121	+		ABIE40_RS06225	0.43	-1.2
1,221,123	+		ABIE40_RS06225	0.43	-0.1
1,221,123	+		ABIE40_RS06225	0.43	-1.3
1,221,123	+		ABIE40_RS06225	0.43	-2.1
1,221,124	-		ABIE40_RS06225	0.43	+1.2
1,221,124	-		ABIE40_RS06225	0.43	+0.1
1,221,124	-		ABIE40_RS06225	0.43	-0.0
1,221,216	+		ABIE40_RS06225	0.53	+0.5
1,221,216	+		ABIE40_RS06225	0.53	-1.3
1,221,216	+		ABIE40_RS06225	0.53	-1.3
1,221,217	-		ABIE40_RS06225	0.53	-0.7
1,221,217	-		ABIE40_RS06225	0.53	+0.9
1,221,217	-		ABIE40_RS06225	0.53	-0.0
1,221,217	-		ABIE40_RS06225	0.53	+1.0
1,221,219	+		ABIE40_RS06225	0.53	-2.8
1,221,219	+		ABIE40_RS06225	0.53	-1.2
1,221,219	+		ABIE40_RS06225	0.53	-1.1
1,221,220	-		ABIE40_RS06225	0.53	+0.9
1,221,220	-		ABIE40_RS06225	0.53	+0.0
1,221,220	-		ABIE40_RS06225	0.53	+0.8
1,221,220	-		ABIE40_RS06225	0.53	-1.0
1,221,220	-		ABIE40_RS06225	0.53	-0.1
1,221,220	-		ABIE40_RS06225	0.53	-1.2
1,221,247	+		ABIE40_RS06225	0.56	-2.3
1,221,248	-		ABIE40_RS06225	0.56	-0.3
1,221,248	-		ABIE40_RS06225	0.56	+1.8
1,221,249	+		ABIE40_RS06225	0.56	+2.9
1,221,249	+		ABIE40_RS06225	0.56	-1.9
1,221,249	+		ABIE40_RS06225	0.56	-0.6
1,221,249	+		ABIE40_RS06225	0.56	-1.0
1,221,249	+		ABIE40_RS06225	0.56	-3.7
1,221,249	+		ABIE40_RS06225	0.56	+0.6
1,221,249	+		ABIE40_RS06225	0.56	-4.2
1,221,250	-		ABIE40_RS06225	0.56	-0.3
1,221,250	-		ABIE40_RS06225	0.56	+1.6
1,221,250	-		ABIE40_RS06225	0.56	+1.0
1,221,250	-		ABIE40_RS06225	0.56	+0.9
1,221,300	+		ABIE40_RS06225	0.62	+0.1
1,221,475	-		ABIE40_RS06225	0.80	-1.0
1,221,582	+				+0.2
1,221,582	+				-2.0
1,221,582	+				-1.5
1,221,582	+				-1.0
1,221,583	-				-0.8
1,221,583	-				+0.1
1,221,583	-				-0.4
1,221,624	+				-0.9
1,221,624	+				+0.9
1,221,624	+				-0.8
1,221,624	+				-2.1
1,221,625	-				+0.2
1,221,625	-				-0.1
1,221,625	-				-1.6
1,221,625	-				+0.3
1,221,625	-				+0.4
1,221,625	-				+0.3
1,221,746	+		ABIE40_RS06230	0.17	-0.8
1,221,762	+		ABIE40_RS06230	0.21	-0.9
1,221,762	+		ABIE40_RS06230	0.21	-0.2
1,221,893	+		ABIE40_RS06230	0.48	-2.5
1,221,893	+		ABIE40_RS06230	0.48	-0.1
1,221,893	+		ABIE40_RS06230	0.48	+1.0
1,221,893	+		ABIE40_RS06230	0.48	+1.9
1,221,894	-		ABIE40_RS06230	0.48	-1.2
1,221,894	-		ABIE40_RS06230	0.48	-1.8
1,221,894	-		ABIE40_RS06230	0.48	-1.0
1,221,894	-		ABIE40_RS06230	0.48	+0.4
1,221,894	-		ABIE40_RS06230	0.48	-0.7
1,221,894	-		ABIE40_RS06230	0.48	+0.7
1,221,937	-		ABIE40_RS06230	0.57	+0.9
1,221,956	+		ABIE40_RS06230	0.61	+0.8
1,221,956	+		ABIE40_RS06230	0.61	+0.6
1,221,956	+		ABIE40_RS06230	0.61	-1.6
1,221,957	-		ABIE40_RS06230	0.61	+0.2
1,221,957	-		ABIE40_RS06230	0.61	+0.3
1,222,169	+				+0.6
1,222,346	+		ABIE40_RS06235	0.43	-0.5
1,222,347	-		ABIE40_RS06235	0.43	-1.3
1,222,347	-		ABIE40_RS06235	0.43	+1.5
1,222,375	+		ABIE40_RS06235	0.49	-0.1
1,222,375	+		ABIE40_RS06235	0.49	-2.3
1,222,376	-		ABIE40_RS06235	0.49	-0.2
1,222,376	-		ABIE40_RS06235	0.49	-1.3
1,222,501	+		ABIE40_RS06235	0.74	-0.6
1,222,501	+		ABIE40_RS06235	0.74	-1.3
1,222,501	+		ABIE40_RS06235	0.74	-1.0
1,222,502	-		ABIE40_RS06235	0.75	+1.3
1,222,502	-		ABIE40_RS06235	0.75	-3.0
1,222,502	-		ABIE40_RS06235	0.75	+0.0
1,222,502	-		ABIE40_RS06235	0.75	-0.7
1,222,607	+				-0.4
1,222,674	+		ABIE40_RS06240	0.11	-1.1
1,222,675	-		ABIE40_RS06240	0.11	+0.0
1,222,675	-		ABIE40_RS06240	0.11	-0.1
1,222,782	+		ABIE40_RS06240	0.34	-1.0
1,222,783	-		ABIE40_RS06240	0.34	-0.7
1,222,783	-		ABIE40_RS06240	0.34	+0.3
1,222,783	-		ABIE40_RS06240	0.34	+0.3
1,222,858	-		ABIE40_RS06240	0.49	-0.3
1,222,858	-		ABIE40_RS06240	0.49	-0.7
1,222,858	-		ABIE40_RS06240	0.49	+1.1
1,222,858	-		ABIE40_RS06240	0.49	-0.9
1,222,980	+		ABIE40_RS06240	0.75	+1.0
1,222,980	+		ABIE40_RS06240	0.75	-0.4
1,222,980	+		ABIE40_RS06240	0.75	-0.3
1,222,980	+		ABIE40_RS06240	0.75	-1.6
1,222,980	+		ABIE40_RS06240	0.75	-1.5
1,222,980	+		ABIE40_RS06240	0.75	-1.7
1,222,980	+		ABIE40_RS06240	0.75	-2.5
1,222,980	+		ABIE40_RS06240	0.75	-0.9
1,222,980	+		ABIE40_RS06240	0.75	-2.3
1,222,981	-		ABIE40_RS06240	0.75	-0.3
1,222,981	-		ABIE40_RS06240	0.75	+1.4
1,222,981	-		ABIE40_RS06240	0.75	-0.6
1,222,981	-		ABIE40_RS06240	0.75	-1.1
1,222,981	-		ABIE40_RS06240	0.75	+1.0
1,222,983	+		ABIE40_RS06240	0.76	-2.3
1,222,983	+		ABIE40_RS06240	0.76	-0.8
1,222,983	+		ABIE40_RS06240	0.76	-1.7
1,222,983	+		ABIE40_RS06240	0.76	-0.3
1,223,088	+				-1.1
1,223,088	+				-0.7
1,223,088	+				-2.1
1,223,089	-				+0.7
1,223,089	-				+0.7