Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS03520

Experiment: L-Methionine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE40_RS03515 and ABIE40_RS03520 are separated by 151 nucleotidesABIE40_RS03520 and ABIE40_RS03525 are separated by 14 nucleotides ABIE40_RS03515: ABIE40_RS03515 - glutamate--cysteine ligase, at 697,161 to 698,534 _RS03515 ABIE40_RS03520: ABIE40_RS03520 - 16S rRNA (uracil(1498)-N(3))-methyltransferase, at 698,686 to 699,423 _RS03520 ABIE40_RS03525: ABIE40_RS03525 - inorganic phosphate transporter, at 699,438 to 700,937 _RS03525 Position (kb) 698 699 700Strain fitness (log2 ratio) -2 -1 0 1 2 3at 697.703 kb on + strand, within ABIE40_RS03515at 697.703 kb on + strand, within ABIE40_RS03515at 697.738 kb on + strand, within ABIE40_RS03515at 697.738 kb on + strand, within ABIE40_RS03515at 697.738 kb on + strand, within ABIE40_RS03515at 697.738 kb on + strand, within ABIE40_RS03515at 697.739 kb on - strand, within ABIE40_RS03515at 698.008 kb on + strand, within ABIE40_RS03515at 698.009 kb on - strand, within ABIE40_RS03515at 698.048 kb on - strand, within ABIE40_RS03515at 698.298 kb on - strand, within ABIE40_RS03515at 698.298 kb on - strand, within ABIE40_RS03515at 698.298 kb on - strand, within ABIE40_RS03515at 698.380 kb on + strand, within ABIE40_RS03515at 698.542 kb on + strandat 698.550 kb on - strandat 698.550 kb on - strandat 698.550 kb on - strandat 698.550 kb on - strandat 698.550 kb on - strandat 698.550 kb on - strandat 698.595 kb on + strandat 698.595 kb on + strandat 698.596 kb on - strandat 698.596 kb on - strandat 698.611 kb on + strandat 698.611 kb on + strandat 698.611 kb on + strandat 698.612 kb on - strandat 698.675 kb on + strandat 698.676 kb on - strandat 698.688 kb on - strandat 698.921 kb on + strand, within ABIE40_RS03520at 698.921 kb on + strand, within ABIE40_RS03520at 698.921 kb on + strand, within ABIE40_RS03520at 698.921 kb on + strand, within ABIE40_RS03520at 698.921 kb on + strand, within ABIE40_RS03520at 698.922 kb on - strand, within ABIE40_RS03520at 698.922 kb on - strand, within ABIE40_RS03520at 698.922 kb on - strand, within ABIE40_RS03520at 698.922 kb on - strand, within ABIE40_RS03520at 698.922 kb on - strand, within ABIE40_RS03520at 699.135 kb on - strand, within ABIE40_RS03520at 699.135 kb on - strand, within ABIE40_RS03520at 699.135 kb on - strand, within ABIE40_RS03520at 699.170 kb on + strand, within ABIE40_RS03520at 699.171 kb on - strand, within ABIE40_RS03520at 699.171 kb on - strand, within ABIE40_RS03520at 699.171 kb on - strand, within ABIE40_RS03520at 699.312 kb on + strand, within ABIE40_RS03520at 699.312 kb on + strand, within ABIE40_RS03520at 699.313 kb on - strand, within ABIE40_RS03520at 699.313 kb on - strand, within ABIE40_RS03520at 699.313 kb on - strand, within ABIE40_RS03520at 699.332 kb on + strand, within ABIE40_RS03520at 699.332 kb on + strand, within ABIE40_RS03520at 699.336 kb on + strand, within ABIE40_RS03520at 699.336 kb on + strand, within ABIE40_RS03520at 699.336 kb on + strand, within ABIE40_RS03520at 699.336 kb on + strand, within ABIE40_RS03520at 699.336 kb on + strand, within ABIE40_RS03520at 699.336 kb on + strand, within ABIE40_RS03520at 699.336 kb on + strand, within ABIE40_RS03520at 699.336 kb on + strand, within ABIE40_RS03520at 699.337 kb on - strand, within ABIE40_RS03520at 699.337 kb on - strand, within ABIE40_RS03520at 699.337 kb on - strand, within ABIE40_RS03520at 699.337 kb on - strand, within ABIE40_RS03520at 699.337 kb on - strand, within ABIE40_RS03520at 699.337 kb on - strand, within ABIE40_RS03520at 699.337 kb on - strand, within ABIE40_RS03520at 699.337 kb on - strand, within ABIE40_RS03520at 699.337 kb on - strand, within ABIE40_RS03520at 699.337 kb on - strand, within ABIE40_RS03520at 699.337 kb on - strand, within ABIE40_RS03520at 699.338 kb on + strand, within ABIE40_RS03520at 699.338 kb on + strand, within ABIE40_RS03520at 699.338 kb on + strand, within ABIE40_RS03520at 699.338 kb on + strand, within ABIE40_RS03520at 699.339 kb on - strand, within ABIE40_RS03520at 699.339 kb on - strand, within ABIE40_RS03520at 699.339 kb on - strand, within ABIE40_RS03520at 699.458 kb on + strandat 699.458 kb on + strandat 699.466 kb on + strandat 699.466 kb on + strandat 699.626 kb on + strand, within ABIE40_RS03525at 699.626 kb on + strand, within ABIE40_RS03525at 699.627 kb on - strand, within ABIE40_RS03525at 699.627 kb on - strand, within ABIE40_RS03525at 699.627 kb on - strand, within ABIE40_RS03525at 699.627 kb on - strand, within ABIE40_RS03525at 699.628 kb on + strand, within ABIE40_RS03525at 699.628 kb on + strand, within ABIE40_RS03525at 699.629 kb on - strand, within ABIE40_RS03525at 699.629 kb on - strand, within ABIE40_RS03525at 699.629 kb on - strand, within ABIE40_RS03525at 699.658 kb on + strand, within ABIE40_RS03525at 699.659 kb on - strand, within ABIE40_RS03525at 699.659 kb on - strand, within ABIE40_RS03525at 699.659 kb on - strand, within ABIE40_RS03525at 699.704 kb on + strand, within ABIE40_RS03525at 699.704 kb on + strand, within ABIE40_RS03525at 699.704 kb on + strand, within ABIE40_RS03525at 699.705 kb on - strand, within ABIE40_RS03525at 699.863 kb on + strand, within ABIE40_RS03525at 699.863 kb on + strand, within ABIE40_RS03525at 700.192 kb on + strand, within ABIE40_RS03525at 700.192 kb on + strand, within ABIE40_RS03525at 700.192 kb on + strand, within ABIE40_RS03525at 700.193 kb on - strand, within ABIE40_RS03525at 700.193 kb on - strand, within ABIE40_RS03525at 700.193 kb on - strand, within ABIE40_RS03525at 700.199 kb on + strand, within ABIE40_RS03525at 700.270 kb on + strand, within ABIE40_RS03525at 700.270 kb on + strand, within ABIE40_RS03525at 700.270 kb on + strand, within ABIE40_RS03525at 700.270 kb on + strand, within ABIE40_RS03525at 700.271 kb on - strand, within ABIE40_RS03525at 700.271 kb on - strand, within ABIE40_RS03525

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Methionine (C)
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697,703 + ABIE40_RS03515 0.39 -1.5
697,703 + ABIE40_RS03515 0.39 -0.4
697,738 + ABIE40_RS03515 0.42 -0.4
697,738 + ABIE40_RS03515 0.42 +2.9
697,738 + ABIE40_RS03515 0.42 +3.6
697,738 + ABIE40_RS03515 0.42 +1.6
697,739 - ABIE40_RS03515 0.42 +2.0
698,008 + ABIE40_RS03515 0.62 -1.2
698,009 - ABIE40_RS03515 0.62 +0.9
698,048 - ABIE40_RS03515 0.65 +2.6
698,298 - ABIE40_RS03515 0.83 -1.5
698,298 - ABIE40_RS03515 0.83 -1.2
698,298 - ABIE40_RS03515 0.83 +1.6
698,380 + ABIE40_RS03515 0.89 -0.4
698,542 + +1.6
698,550 - -0.4
698,550 - -1.0
698,550 - +1.4
698,550 - -1.5
698,550 - -0.3
698,550 - -0.6
698,595 + -0.1
698,595 + -0.1
698,596 - -0.2
698,596 - +0.5
698,611 + -0.4
698,611 + +2.2
698,611 + -1.8
698,612 - +0.6
698,675 + -1.8
698,676 - -0.7
698,688 - -0.9
698,921 + ABIE40_RS03520 0.32 -0.0
698,921 + ABIE40_RS03520 0.32 +0.5
698,921 + ABIE40_RS03520 0.32 +0.4
698,921 + ABIE40_RS03520 0.32 -1.5
698,921 + ABIE40_RS03520 0.32 -0.9
698,922 - ABIE40_RS03520 0.32 -2.4
698,922 - ABIE40_RS03520 0.32 -0.7
698,922 - ABIE40_RS03520 0.32 +0.7
698,922 - ABIE40_RS03520 0.32 +1.5
698,922 - ABIE40_RS03520 0.32 +0.8
699,135 - ABIE40_RS03520 0.61 +0.3
699,135 - ABIE40_RS03520 0.61 -0.3
699,135 - ABIE40_RS03520 0.61 -1.1
699,170 + ABIE40_RS03520 0.66 +0.3
699,171 - ABIE40_RS03520 0.66 +0.2
699,171 - ABIE40_RS03520 0.66 -0.4
699,171 - ABIE40_RS03520 0.66 -0.4
699,312 + ABIE40_RS03520 0.85 -0.0
699,312 + ABIE40_RS03520 0.85 -0.1
699,313 - ABIE40_RS03520 0.85 +1.5
699,313 - ABIE40_RS03520 0.85 +2.6
699,313 - ABIE40_RS03520 0.85 -0.2
699,332 + ABIE40_RS03520 0.88 -0.4
699,332 + ABIE40_RS03520 0.88 -0.5
699,336 + ABIE40_RS03520 0.88 +0.3
699,336 + ABIE40_RS03520 0.88 +0.6
699,336 + ABIE40_RS03520 0.88 -1.7
699,336 + ABIE40_RS03520 0.88 -0.6
699,336 + ABIE40_RS03520 0.88 +1.6
699,336 + ABIE40_RS03520 0.88 -0.9
699,336 + ABIE40_RS03520 0.88 -0.4
699,336 + ABIE40_RS03520 0.88 -0.4
699,337 - ABIE40_RS03520 0.88 -0.0
699,337 - ABIE40_RS03520 0.88 -2.0
699,337 - ABIE40_RS03520 0.88 +0.5
699,337 - ABIE40_RS03520 0.88 +0.6
699,337 - ABIE40_RS03520 0.88 -2.1
699,337 - ABIE40_RS03520 0.88 +0.0
699,337 - ABIE40_RS03520 0.88 -0.0
699,337 - ABIE40_RS03520 0.88 -1.5
699,337 - ABIE40_RS03520 0.88 +0.5
699,337 - ABIE40_RS03520 0.88 +0.2
699,337 - ABIE40_RS03520 0.88 -0.0
699,338 + ABIE40_RS03520 0.88 -1.5
699,338 + ABIE40_RS03520 0.88 -1.9
699,338 + ABIE40_RS03520 0.88 +0.9
699,338 + ABIE40_RS03520 0.88 -0.7
699,339 - ABIE40_RS03520 0.88 +0.3
699,339 - ABIE40_RS03520 0.88 +0.6
699,339 - ABIE40_RS03520 0.88 +0.1
699,458 + -1.0
699,458 + -1.8
699,466 + +0.1
699,466 + -0.5
699,626 + ABIE40_RS03525 0.13 -0.2
699,626 + ABIE40_RS03525 0.13 -0.2
699,627 - ABIE40_RS03525 0.13 -0.9
699,627 - ABIE40_RS03525 0.13 +0.7
699,627 - ABIE40_RS03525 0.13 -1.4
699,627 - ABIE40_RS03525 0.13 -0.5
699,628 + ABIE40_RS03525 0.13 +1.6
699,628 + ABIE40_RS03525 0.13 +0.0
699,629 - ABIE40_RS03525 0.13 +0.6
699,629 - ABIE40_RS03525 0.13 -0.3
699,629 - ABIE40_RS03525 0.13 +1.6
699,658 + ABIE40_RS03525 0.15 -0.5
699,659 - ABIE40_RS03525 0.15 -1.0
699,659 - ABIE40_RS03525 0.15 -0.4
699,659 - ABIE40_RS03525 0.15 +0.0
699,704 + ABIE40_RS03525 0.18 -0.8
699,704 + ABIE40_RS03525 0.18 -0.7
699,704 + ABIE40_RS03525 0.18 -1.5
699,705 - ABIE40_RS03525 0.18 -1.5
699,863 + ABIE40_RS03525 0.28 -0.2
699,863 + ABIE40_RS03525 0.28 +0.3
700,192 + ABIE40_RS03525 0.50 -0.3
700,192 + ABIE40_RS03525 0.50 -0.7
700,192 + ABIE40_RS03525 0.50 -0.2
700,193 - ABIE40_RS03525 0.50 +0.3
700,193 - ABIE40_RS03525 0.50 +0.3
700,193 - ABIE40_RS03525 0.50 -0.5
700,199 + ABIE40_RS03525 0.51 -0.0
700,270 + ABIE40_RS03525 0.55 -0.5
700,270 + ABIE40_RS03525 0.55 -0.2
700,270 + ABIE40_RS03525 0.55 -0.1
700,270 + ABIE40_RS03525 0.55 -0.4
700,271 - ABIE40_RS03525 0.56 +0.2
700,271 - ABIE40_RS03525 0.56 +0.3

Or see this region's nucleotide sequence