Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS25240 and ABID97_RS25245 are separated by 44 nucleotides ABID97_RS25245 and ABID97_RS25250 overlap by 1 nucleotides ABID97_RS25250 and ABID97_RS25255 are separated by 29 nucleotides
ABID97_RS25240: ABID97_RS25240 - SprT family zinc-dependent metalloprotease, at 5,230,343 to 5,231,296
_RS25240
ABID97_RS25245: ABID97_RS25245 - lysophospholipid acyltransferase family protein, at 5,231,341 to 5,232,111
_RS25245
ABID97_RS25250: ABID97_RS25250 - D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase, at 5,232,111 to 5,232,689
_RS25250
ABID97_RS25255: ABID97_RS25255 - glycine--tRNA ligase subunit beta, at 5,232,719 to 5,234,851
_RS25255
Position (kb) 5231
5232
5233 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5230.396 kb on - strand at 5230.482 kb on + strand, within ABID97_RS25240 at 5230.482 kb on + strand, within ABID97_RS25240 at 5230.483 kb on - strand, within ABID97_RS25240 at 5230.483 kb on - strand, within ABID97_RS25240 at 5231.043 kb on + strand, within ABID97_RS25240 at 5231.385 kb on - strand at 5231.612 kb on + strand, within ABID97_RS25245 at 5231.612 kb on + strand, within ABID97_RS25245 at 5231.612 kb on + strand, within ABID97_RS25245 at 5231.612 kb on + strand, within ABID97_RS25245 at 5231.612 kb on + strand, within ABID97_RS25245 at 5231.612 kb on + strand, within ABID97_RS25245 at 5231.612 kb on + strand, within ABID97_RS25245 at 5231.612 kb on + strand, within ABID97_RS25245 at 5231.612 kb on + strand, within ABID97_RS25245 at 5231.613 kb on - strand, within ABID97_RS25245 at 5231.613 kb on - strand, within ABID97_RS25245 at 5231.789 kb on + strand, within ABID97_RS25245 at 5231.789 kb on + strand, within ABID97_RS25245 at 5231.789 kb on + strand, within ABID97_RS25245 at 5231.789 kb on + strand, within ABID97_RS25245 at 5231.789 kb on + strand, within ABID97_RS25245 at 5231.790 kb on - strand, within ABID97_RS25245 at 5231.790 kb on - strand, within ABID97_RS25245 at 5231.790 kb on - strand, within ABID97_RS25245 at 5231.790 kb on - strand, within ABID97_RS25245 at 5231.790 kb on - strand, within ABID97_RS25245 at 5232.427 kb on + strand, within ABID97_RS25250 at 5232.427 kb on + strand, within ABID97_RS25250 at 5232.427 kb on + strand, within ABID97_RS25250 at 5232.427 kb on + strand, within ABID97_RS25250 at 5232.427 kb on + strand, within ABID97_RS25250 at 5232.428 kb on - strand, within ABID97_RS25250 at 5232.428 kb on - strand, within ABID97_RS25250 at 5232.428 kb on - strand, within ABID97_RS25250 at 5232.428 kb on - strand, within ABID97_RS25250 at 5232.428 kb on - strand, within ABID97_RS25250 at 5232.428 kb on - strand, within ABID97_RS25250 at 5232.428 kb on - strand, within ABID97_RS25250
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 5,230,396 - -1.6 5,230,482 + ABID97_RS25240 0.15 -0.7 5,230,482 + ABID97_RS25240 0.15 -0.1 5,230,483 - ABID97_RS25240 0.15 +0.0 5,230,483 - ABID97_RS25240 0.15 -0.8 5,231,043 + ABID97_RS25240 0.73 -0.1 5,231,385 - +1.7 5,231,612 + ABID97_RS25245 0.35 -1.4 5,231,612 + ABID97_RS25245 0.35 -1.1 5,231,612 + ABID97_RS25245 0.35 -0.5 5,231,612 + ABID97_RS25245 0.35 -1.2 5,231,612 + ABID97_RS25245 0.35 -0.3 5,231,612 + ABID97_RS25245 0.35 -2.0 5,231,612 + ABID97_RS25245 0.35 -1.8 5,231,612 + ABID97_RS25245 0.35 -1.3 5,231,612 + ABID97_RS25245 0.35 -0.9 5,231,613 - ABID97_RS25245 0.35 +3.3 5,231,613 - ABID97_RS25245 0.35 -0.9 5,231,789 + ABID97_RS25245 0.58 -0.5 5,231,789 + ABID97_RS25245 0.58 -0.7 5,231,789 + ABID97_RS25245 0.58 -1.1 5,231,789 + ABID97_RS25245 0.58 -2.7 5,231,789 + ABID97_RS25245 0.58 -0.9 5,231,790 - ABID97_RS25245 0.58 -0.3 5,231,790 - ABID97_RS25245 0.58 +1.0 5,231,790 - ABID97_RS25245 0.58 +2.3 5,231,790 - ABID97_RS25245 0.58 +0.3 5,231,790 - ABID97_RS25245 0.58 -2.2 5,232,427 + ABID97_RS25250 0.55 +0.7 5,232,427 + ABID97_RS25250 0.55 +0.7 5,232,427 + ABID97_RS25250 0.55 -0.0 5,232,427 + ABID97_RS25250 0.55 -0.0 5,232,427 + ABID97_RS25250 0.55 -2.2 5,232,428 - ABID97_RS25250 0.55 +1.0 5,232,428 - ABID97_RS25250 0.55 +0.7 5,232,428 - ABID97_RS25250 0.55 -0.4 5,232,428 - ABID97_RS25250 0.55 -0.3 5,232,428 - ABID97_RS25250 0.55 -0.4 5,232,428 - ABID97_RS25250 0.55 -1.6 5,232,428 - ABID97_RS25250 0.55 -1.7
Or see this region's nucleotide sequence