Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS20315 and ABID97_RS20320 are separated by 42 nucleotides ABID97_RS20320 and ABID97_RS20325 overlap by 4 nucleotides ABID97_RS20325 and ABID97_RS20330 are separated by 1 nucleotides
ABID97_RS20315: ABID97_RS20315 - alpha/beta fold hydrolase, at 4,193,010 to 4,194,008
_RS20315
ABID97_RS20320: ABID97_RS20320 - tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA, at 4,194,051 to 4,195,037
_RS20320
ABID97_RS20325: ABID97_RS20325 - ABC transporter ATP-binding protein, at 4,195,034 to 4,195,684
_RS20325
ABID97_RS20330: ABID97_RS20330 - threo-3-hydroxy-L-aspartate ammonia-lyase, at 4,195,686 to 4,196,642
_RS20330
Position (kb) 4194
4195
4196 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4193.214 kb on + strand, within ABID97_RS20315 at 4193.268 kb on + strand, within ABID97_RS20315 at 4193.269 kb on + strand, within ABID97_RS20315 at 4193.269 kb on - strand, within ABID97_RS20315 at 4193.269 kb on - strand, within ABID97_RS20315 at 4193.269 kb on - strand, within ABID97_RS20315 at 4193.286 kb on + strand, within ABID97_RS20315 at 4193.359 kb on - strand, within ABID97_RS20315 at 4193.469 kb on + strand, within ABID97_RS20315 at 4193.470 kb on - strand, within ABID97_RS20315 at 4193.470 kb on - strand, within ABID97_RS20315 at 4193.470 kb on - strand, within ABID97_RS20315 at 4193.470 kb on - strand, within ABID97_RS20315 at 4193.817 kb on + strand, within ABID97_RS20315 at 4194.037 kb on - strand at 4194.050 kb on + strand at 4194.297 kb on + strand, within ABID97_RS20320 at 4194.394 kb on - strand, within ABID97_RS20320 at 4195.067 kb on + strand at 4195.077 kb on + strand at 4195.077 kb on + strand at 4195.078 kb on - strand at 4195.687 kb on + strand at 4195.688 kb on - strand at 4195.887 kb on - strand, within ABID97_RS20330 at 4195.921 kb on + strand, within ABID97_RS20330 at 4195.921 kb on + strand, within ABID97_RS20330
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 4,193,214 + ABID97_RS20315 0.20 +2.2 4,193,268 + ABID97_RS20315 0.26 -0.1 4,193,269 + ABID97_RS20315 0.26 +0.4 4,193,269 - ABID97_RS20315 0.26 +0.0 4,193,269 - ABID97_RS20315 0.26 -0.2 4,193,269 - ABID97_RS20315 0.26 -0.1 4,193,286 + ABID97_RS20315 0.28 -0.0 4,193,359 - ABID97_RS20315 0.35 +0.6 4,193,469 + ABID97_RS20315 0.46 -0.3 4,193,470 - ABID97_RS20315 0.46 +0.8 4,193,470 - ABID97_RS20315 0.46 +0.1 4,193,470 - ABID97_RS20315 0.46 +0.5 4,193,470 - ABID97_RS20315 0.46 +0.7 4,193,817 + ABID97_RS20315 0.81 -1.5 4,194,037 - +0.6 4,194,050 + -2.0 4,194,297 + ABID97_RS20320 0.25 -0.6 4,194,394 - ABID97_RS20320 0.35 +3.1 4,195,067 + +0.5 4,195,077 + -0.4 4,195,077 + +0.3 4,195,078 - -0.2 4,195,687 + +0.1 4,195,688 - -0.6 4,195,887 - ABID97_RS20330 0.21 -0.4 4,195,921 + ABID97_RS20330 0.25 +0.7 4,195,921 + ABID97_RS20330 0.25 +0.3
Or see this region's nucleotide sequence