Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS09400 and ABID97_RS09405 are separated by 19 nucleotides ABID97_RS09405 and ABID97_RS09410 are separated by 58 nucleotides ABID97_RS09410 and ABID97_RS09415 are separated by 24 nucleotides
ABID97_RS09400: ABID97_RS09400 - xanthine dehydrogenase family protein molybdopterin-binding subunit, at 1,975,076 to 1,977,526
_RS09400
ABID97_RS09405: ABID97_RS09405 - xanthine dehydrogenase family protein subunit M, at 1,977,546 to 1,978,337
_RS09405
ABID97_RS09410: ABID97_RS09410 - MoxR family ATPase, at 1,978,396 to 1,979,298
_RS09410
ABID97_RS09415: ABID97_RS09415 - VWA domain-containing protein, at 1,979,323 to 1,980,537
_RS09415
Position (kb)
1977
1978
1979 Strain fitness (log2 ratio)
-1
0
1 at 1976.919 kb on - strand, within ABID97_RS09400 at 1976.933 kb on + strand, within ABID97_RS09400 at 1976.978 kb on + strand, within ABID97_RS09400 at 1977.014 kb on + strand, within ABID97_RS09400 at 1977.015 kb on - strand, within ABID97_RS09400 at 1977.180 kb on - strand, within ABID97_RS09400 at 1977.180 kb on - strand, within ABID97_RS09400 at 1977.224 kb on + strand, within ABID97_RS09400 at 1977.225 kb on - strand, within ABID97_RS09400 at 1977.549 kb on + strand at 1977.550 kb on - strand at 1977.802 kb on - strand, within ABID97_RS09405 at 1978.447 kb on + strand at 1978.630 kb on + strand, within ABID97_RS09410 at 1978.643 kb on - strand, within ABID97_RS09410 at 1978.714 kb on + strand, within ABID97_RS09410 at 1978.726 kb on + strand, within ABID97_RS09410 at 1978.841 kb on - strand, within ABID97_RS09410 at 1978.853 kb on - strand, within ABID97_RS09410 at 1978.967 kb on - strand, within ABID97_RS09410
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 1,976,919 - ABID97_RS09400 0.75 -0.9 1,976,933 + ABID97_RS09400 0.76 +1.6 1,976,978 + ABID97_RS09400 0.78 +1.0 1,977,014 + ABID97_RS09400 0.79 -0.3 1,977,015 - ABID97_RS09400 0.79 +0.3 1,977,180 - ABID97_RS09400 0.86 +0.7 1,977,180 - ABID97_RS09400 0.86 -0.4 1,977,224 + ABID97_RS09400 0.88 +1.0 1,977,225 - ABID97_RS09400 0.88 -0.8 1,977,549 + +0.7 1,977,550 - -0.4 1,977,802 - ABID97_RS09405 0.32 -0.9 1,978,447 + -0.5 1,978,630 + ABID97_RS09410 0.26 +1.2 1,978,643 - ABID97_RS09410 0.27 +0.4 1,978,714 + ABID97_RS09410 0.35 -0.4 1,978,726 + ABID97_RS09410 0.37 +0.8 1,978,841 - ABID97_RS09410 0.49 -0.1 1,978,853 - ABID97_RS09410 0.51 -0.2 1,978,967 - ABID97_RS09410 0.63 -0.3
Or see this region's nucleotide sequence