Strain Fitness in Ralstonia solanacearum UW163 around UW163_RS03860

Experiment: CPG

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntUW163_RS03855 and UW163_RS03860 are separated by 22 nucleotidesUW163_RS03860 and UW163_RS03865 are separated by 12 nucleotides UW163_RS03855: UW163_RS03855 - penicillin-binding protein 2, at 805,909 to 808,317 _RS03855 UW163_RS03860: UW163_RS03860 - rod shape-determining protein MreD, at 808,340 to 808,852 _RS03860 UW163_RS03865: UW163_RS03865 - rod shape-determining protein MreC, at 808,865 to 809,905 _RS03865 Position (kb) 808 809Strain fitness (log2 ratio) -1 0 1at 808.837 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction CPG
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808,837 - +0.1

Or see this region's nucleotide sequence