Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3606

Experiment: m.b. nitrite 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 10 mM
4,276,351	+		Echvi_3604	0.77	-1.0
4,276,386	+		Echvi_3604	0.81	-1.7
4,276,393	+		Echvi_3604	0.81	-1.8
4,276,428	+		Echvi_3604	0.85	+0.3
4,276,530	+				-0.8
4,276,575	+				-2.1
4,276,601	+				+0.6
4,276,629	+				-0.7
4,276,659	+				+0.4
4,276,695	+				+0.7
4,276,722	+				-1.0
4,276,722	+				-1.1
4,276,722	+				-0.3
4,276,775	+		Echvi_3605	0.18	-0.7
4,276,775	+		Echvi_3605	0.18	-0.7
4,276,775	+		Echvi_3605	0.18	-2.1
4,276,779	+		Echvi_3605	0.19	+0.3
4,276,779	+		Echvi_3605	0.19	-1.0
4,276,916	+		Echvi_3605	0.44	+0.1
4,276,950	+		Echvi_3605	0.50	+0.2
4,277,025	+		Echvi_3605	0.64	-1.1
4,277,026	-		Echvi_3605	0.64	-0.8
4,277,061	+		Echvi_3605	0.71	-0.1
4,277,061	+		Echvi_3605	0.71	+0.8
4,277,062	-		Echvi_3605	0.71	+0.6
4,277,062	-		Echvi_3605	0.71	-1.6
4,277,133	+		Echvi_3605	0.84	+0.3
4,277,134	-		Echvi_3605	0.84	-0.3
4,277,155	-		Echvi_3605	0.88	-1.2
4,277,173	-				-0.9
4,277,180	-				-1.0
4,277,180	-				+0.3
4,277,201	-				+0.1
4,277,238	+				-0.1
4,277,250	+				+0.1
4,277,288	+				+0.6
4,277,309	+				-3.4
4,277,309	+				-0.6
4,277,365	+				+0.3
4,277,365	+				+0.2
4,277,422	+				+0.8
4,277,422	+				+2.1
4,277,493	+				+0.9
4,277,534	+		Echvi_3606	0.11	-0.1
4,277,554	+		Echvi_3606	0.12	+1.4
4,277,597	+		Echvi_3606	0.14	+0.4
4,277,598	-		Echvi_3606	0.14	+0.3
4,277,658	-		Echvi_3606	0.17	-0.6
4,277,702	+		Echvi_3606	0.19	+0.0
4,277,702	+		Echvi_3606	0.19	+0.5
4,277,702	+		Echvi_3606	0.19	-0.1
4,277,702	+		Echvi_3606	0.19	-1.6
4,277,709	-		Echvi_3606	0.19	-1.5
4,277,709	-		Echvi_3606	0.19	-0.4
4,277,709	-		Echvi_3606	0.19	+0.8
4,277,717	-		Echvi_3606	0.20	+1.0
4,277,717	-		Echvi_3606	0.20	+0.1
4,277,718	+		Echvi_3606	0.20	+0.2
4,277,718	+		Echvi_3606	0.20	-1.5
4,277,719	-		Echvi_3606	0.20	-0.5
4,277,719	-		Echvi_3606	0.20	-2.1
4,277,754	+		Echvi_3606	0.22	+0.2
4,277,754	+		Echvi_3606	0.22	+1.5
4,277,754	+		Echvi_3606	0.22	+0.4
4,277,754	+		Echvi_3606	0.22	-0.2
4,277,755	-		Echvi_3606	0.22	+0.1
4,277,755	-		Echvi_3606	0.22	-0.1
4,277,756	+		Echvi_3606	0.22	+0.9
4,277,757	-		Echvi_3606	0.22	+0.3
4,277,773	-		Echvi_3606	0.23	+0.6
4,277,796	-		Echvi_3606	0.24	-1.1
4,277,823	+		Echvi_3606	0.25	+0.7
4,277,829	+		Echvi_3606	0.26	+0.3
4,277,829	+		Echvi_3606	0.26	-0.4
4,277,830	-		Echvi_3606	0.26	+0.4
4,277,830	-		Echvi_3606	0.26	-0.5
4,277,849	-		Echvi_3606	0.27	-0.5
4,277,887	-		Echvi_3606	0.28	+0.1
4,277,958	-		Echvi_3606	0.32	-0.8
4,277,958	-		Echvi_3606	0.32	+0.6
4,277,978	+		Echvi_3606	0.33	+0.3
4,277,979	-		Echvi_3606	0.33	+0.1
4,278,006	+		Echvi_3606	0.34	-1.6
4,278,006	+		Echvi_3606	0.34	-0.3
4,278,007	-		Echvi_3606	0.34	-0.6
4,278,007	-		Echvi_3606	0.34	-0.7
4,278,008	+		Echvi_3606	0.34	+1.3
4,278,008	+		Echvi_3606	0.34	-0.4
4,278,020	+		Echvi_3606	0.35	-1.4
4,278,065	+		Echvi_3606	0.37	+0.8
4,278,065	+		Echvi_3606	0.37	-0.3
4,278,066	-		Echvi_3606	0.37	+0.9
4,278,069	+		Echvi_3606	0.38	-0.1
4,278,069	+		Echvi_3606	0.38	-1.9
4,278,070	-		Echvi_3606	0.38	+1.6
4,278,074	-		Echvi_3606	0.38	-0.6
4,278,094	+		Echvi_3606	0.39	-0.8
4,278,094	+		Echvi_3606	0.39	+0.2
4,278,104	+		Echvi_3606	0.39	+2.3
4,278,105	-		Echvi_3606	0.39	-1.1
4,278,209	+		Echvi_3606	0.45	-1.5
4,278,258	+		Echvi_3606	0.47	-0.2
4,278,258	+		Echvi_3606	0.47	+0.2
4,278,258	+		Echvi_3606	0.47	-0.6
4,278,258	+		Echvi_3606	0.47	+1.1
4,278,258	+		Echvi_3606	0.47	-2.4
4,278,258	+		Echvi_3606	0.47	-2.7
4,278,259	-		Echvi_3606	0.47	+0.2
4,278,259	-		Echvi_3606	0.47	+0.8
4,278,259	-		Echvi_3606	0.47	+0.1
4,278,259	-		Echvi_3606	0.47	+1.2
4,278,259	-		Echvi_3606	0.47	+1.3
4,278,259	-		Echvi_3606	0.47	+0.8
4,278,304	-		Echvi_3606	0.49	+0.1
4,278,315	+		Echvi_3606	0.50	+0.0
4,278,316	-		Echvi_3606	0.50	+0.9
4,278,483	+		Echvi_3606	0.58	-0.0
4,278,496	-		Echvi_3606	0.59	-1.0
4,278,496	-		Echvi_3606	0.59	-1.8
4,278,496	-		Echvi_3606	0.59	-0.1
4,278,499	+		Echvi_3606	0.59	+0.3
4,278,500	-		Echvi_3606	0.59	-1.0
4,278,501	+		Echvi_3606	0.59	-1.3
4,278,501	+		Echvi_3606	0.59	+0.4
4,278,501	+		Echvi_3606	0.59	+0.1
4,278,501	+		Echvi_3606	0.59	+1.1
4,278,501	+		Echvi_3606	0.59	+0.1
4,278,502	-		Echvi_3606	0.59	-0.8
4,278,502	-		Echvi_3606	0.59	-0.1
4,278,515	-		Echvi_3606	0.60	+0.7
4,278,599	-		Echvi_3606	0.64	-0.4
4,278,628	-		Echvi_3606	0.66	+0.5
4,278,683	+		Echvi_3606	0.68	-0.0
4,278,683	+		Echvi_3606	0.68	+0.1
4,278,683	+		Echvi_3606	0.68	-0.7
4,278,684	-		Echvi_3606	0.68	-0.2
4,278,684	-		Echvi_3606	0.68	+0.3
4,278,684	-		Echvi_3606	0.68	+0.7
4,278,684	-		Echvi_3606	0.68	+0.7
4,278,684	-		Echvi_3606	0.68	+0.4
4,278,686	+		Echvi_3606	0.69	-1.0
4,278,686	+		Echvi_3606	0.69	-0.1
4,278,686	+		Echvi_3606	0.69	-0.5
4,278,687	-		Echvi_3606	0.69	+0.2
4,278,689	-		Echvi_3606	0.69	-0.8
4,278,689	-		Echvi_3606	0.69	+0.3
4,278,725	+		Echvi_3606	0.70	+1.3
4,278,756	-		Echvi_3606	0.72	-0.3
4,278,783	-		Echvi_3606	0.73	-1.0
4,278,845	-		Echvi_3606	0.77	-0.0
4,278,853	+		Echvi_3606	0.77	-0.4
4,278,904	-		Echvi_3606	0.79	+0.3
4,278,904	-		Echvi_3606	0.79	-0.5
4,278,904	-		Echvi_3606	0.79	+0.6
4,278,925	+		Echvi_3606	0.81	+0.0
4,278,925	+		Echvi_3606	0.81	+0.3
4,278,925	+		Echvi_3606	0.81	-0.9
4,278,926	-		Echvi_3606	0.81	-0.3
4,278,926	-		Echvi_3606	0.81	+0.1
4,278,926	-		Echvi_3606	0.81	-1.7
4,278,932	+		Echvi_3606	0.81	+0.9
4,278,932	+		Echvi_3606	0.81	+0.5
4,279,042	+		Echvi_3606	0.86	+0.4
4,279,113	+				+1.0
4,279,114	-				+0.1
4,279,114	-				-0.9
4,279,128	-				+0.7
4,279,135	+				-0.2
4,279,142	+				-0.2
4,279,147	+				+1.4
4,279,147	+				-0.4
4,279,158	-				-0.9
4,279,158	-				-0.3
4,279,181	+				+0.3
4,279,182	-				-0.5
4,279,184	-				+0.2
4,279,206	+				+0.8
4,279,207	-				+0.4
4,279,234	-				+0.2
4,279,234	-				-0.1
4,279,234	-				+0.5
4,279,277	-				-2.4
4,279,277	-				-0.0
4,279,280	+				+0.6
4,279,280	+				-1.5
4,279,280	+				+0.9
4,279,280	+				-1.3
4,279,280	+				+0.4
4,279,280	+				+0.9
4,279,280	+				-1.0
4,279,280	+				+1.0
4,279,280	+				-1.3
4,279,281	-				+0.8
4,279,281	-				+0.8
4,279,281	-				+0.8
4,279,281	-				-0.5
4,279,281	-				+0.1
4,279,310	+				-0.4
4,279,331	+				+1.0
4,279,370	+				-0.1
4,279,401	-				+1.7
4,279,446	-				+0.7
4,279,468	-		Echvi_3607	0.12	-0.9
4,279,503	-		Echvi_3607	0.15	-0.5
4,279,503	-		Echvi_3607	0.15	+0.5
4,279,519	+		Echvi_3607	0.16	-0.7
4,279,520	-		Echvi_3607	0.16	+0.0
4,279,547	+		Echvi_3607	0.18	+0.1
4,279,599	+		Echvi_3607	0.23	-0.5
4,279,599	+		Echvi_3607	0.23	+0.3
4,279,600	-		Echvi_3607	0.23	-0.7
4,279,600	-		Echvi_3607	0.23	-0.0
4,279,610	+		Echvi_3607	0.24	+0.1
4,279,610	+		Echvi_3607	0.24	+0.5
4,279,625	+		Echvi_3607	0.25	+0.7
4,279,636	+		Echvi_3607	0.26	+0.1
4,279,664	+		Echvi_3607	0.28	-1.0
4,279,664	+		Echvi_3607	0.28	-0.1
4,279,665	-		Echvi_3607	0.28	+1.7
4,279,665	-		Echvi_3607	0.28	-2.8
4,279,689	-		Echvi_3607	0.30	-0.3
4,279,750	+		Echvi_3607	0.36	-0.7
4,279,750	+		Echvi_3607	0.36	+0.4
4,279,765	+		Echvi_3607	0.37	+1.6
4,279,766	-		Echvi_3607	0.37	+1.4
4,279,836	+		Echvi_3607	0.43	-0.7
4,279,837	-		Echvi_3607	0.43	-0.2
4,279,980	+		Echvi_3607	0.55	-0.7
4,279,983	+		Echvi_3607	0.55	+1.2
4,279,984	-		Echvi_3607	0.55	+0.3
4,279,984	-		Echvi_3607	0.55	-1.4
4,279,986	+		Echvi_3607	0.55	-0.7
4,279,987	-		Echvi_3607	0.56	+0.7
4,280,040	+		Echvi_3607	0.60	-0.2
4,280,040	+		Echvi_3607	0.60	+0.1
4,280,040	+		Echvi_3607	0.60	+0.4
4,280,041	-		Echvi_3607	0.60	-0.5
4,280,053	+		Echvi_3607	0.61	+0.6
4,280,053	+		Echvi_3607	0.61	-0.7
4,280,054	-		Echvi_3607	0.61	+0.3
4,280,077	+		Echvi_3607	0.63	+0.5
4,280,077	+		Echvi_3607	0.63	-0.5
4,280,077	+		Echvi_3607	0.63	-0.0
4,280,078	-		Echvi_3607	0.63	-0.1
4,280,078	-		Echvi_3607	0.63	-0.4
4,280,083	+		Echvi_3607	0.64	-0.2
4,280,098	+		Echvi_3607	0.65	-0.1
4,280,099	-		Echvi_3607	0.65	+1.6
4,280,099	-		Echvi_3607	0.65	+0.7
4,280,120	+		Echvi_3607	0.67	+0.9
4,280,136	-		Echvi_3607	0.68	-1.0
4,280,158	-		Echvi_3607	0.70	+0.9
4,280,250	+		Echvi_3607	0.78	-0.7
4,280,251	-		Echvi_3607	0.78	+1.3
4,280,253	-		Echvi_3607	0.78	-0.3
4,280,259	-				+0.7
4,280,259	-		Echvi_3607	0.79	+1.0
4,280,259	-		Echvi_3607	0.79	+0.1
4,280,287	+		Echvi_3607	0.81	+1.4
4,280,288	-		Echvi_3607	0.81	-0.3
4,280,288	-		Echvi_3607	0.81	-0.6