Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3494

Experiment: m.b. nitrite 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 10 mM
4,138,574	-		Echvi_3493	0.33	-2.6
4,138,586	+		Echvi_3493	0.33	+0.7
4,138,590	-		Echvi_3493	0.34	-1.8
4,138,590	-		Echvi_3493	0.34	-0.2
4,138,590	-		Echvi_3493	0.34	-1.2
4,138,592	+		Echvi_3493	0.34	+0.3
4,138,593	-		Echvi_3493	0.34	-0.9
4,138,610	+		Echvi_3493	0.35	+1.0
4,138,610	+		Echvi_3493	0.35	+0.4
4,138,610	+		Echvi_3493	0.35	+0.8
4,138,610	+		Echvi_3493	0.35	-0.3
4,138,610	+		Echvi_3493	0.35	+0.4
4,138,611	-		Echvi_3493	0.35	-0.3
4,138,611	-		Echvi_3493	0.35	-0.9
4,138,611	-		Echvi_3493	0.35	-1.8
4,138,611	-		Echvi_3493	0.35	+0.3
4,138,615	-		Echvi_3493	0.36	-0.8
4,138,625	-		Echvi_3493	0.36	+0.7
4,138,635	-		Echvi_3493	0.37	-1.0
4,138,683	+		Echvi_3493	0.40	-0.3
4,138,683	+		Echvi_3493	0.40	+0.9
4,138,683	+		Echvi_3493	0.40	-0.0
4,138,684	-		Echvi_3493	0.40	-1.4
4,138,712	+		Echvi_3493	0.42	+0.0
4,138,716	+		Echvi_3493	0.43	+0.2
4,138,717	-		Echvi_3493	0.43	-0.2
4,138,801	-		Echvi_3493	0.49	+0.3
4,138,833	-		Echvi_3493	0.51	-0.0
4,138,844	+		Echvi_3493	0.52	+1.3
4,138,979	+		Echvi_3493	0.61	-0.2
4,138,980	-		Echvi_3493	0.61	-0.1
4,138,980	-		Echvi_3493	0.61	-0.4
4,139,015	+		Echvi_3493	0.64	+1.1
4,139,050	+		Echvi_3493	0.66	-0.2
4,139,114	+		Echvi_3493	0.71	+0.5
4,139,118	-		Echvi_3493	0.71	+2.3
4,139,121	+		Echvi_3493	0.71	-0.3
4,139,164	-		Echvi_3493	0.74	-0.6
4,139,164	-		Echvi_3493	0.74	-0.3
4,139,164	-		Echvi_3493	0.74	-0.4
4,139,181	+		Echvi_3493	0.75	+0.6
4,139,288	+		Echvi_3493	0.83	+0.6
4,139,289	-		Echvi_3493	0.83	+0.2
4,139,300	+		Echvi_3493	0.84	-0.8
4,139,300	+		Echvi_3493	0.84	+0.6
4,139,301	-		Echvi_3493	0.84	+0.1
4,139,301	-		Echvi_3493	0.84	+0.7
4,139,452	-				+0.7
4,139,494	+				+0.7
4,139,515	+				+0.1
4,139,515	+				+0.1
4,139,519	+				+1.2
4,139,520	-				-0.5
4,139,542	+				+0.2
4,139,543	-				+0.0
4,139,543	-				-0.3
4,139,560	-				+0.1
4,139,637	+				-1.4
4,139,649	+				+0.9
4,139,649	+				+0.8
4,139,658	-				+0.9
4,139,673	-				+0.2
4,139,716	-		Echvi_3494	0.11	-0.4
4,139,736	+		Echvi_3494	0.13	-2.5
4,139,737	-		Echvi_3494	0.13	-1.2
4,139,779	-		Echvi_3494	0.16	-1.2
4,139,798	-		Echvi_3494	0.17	-0.1
4,139,885	+		Echvi_3494	0.23	-0.6
4,139,885	+		Echvi_3494	0.23	+0.9
4,139,886	-		Echvi_3494	0.23	+0.3
4,139,886	-		Echvi_3494	0.23	+0.5
4,139,886	-		Echvi_3494	0.23	+0.2
4,139,886	-		Echvi_3494	0.23	-1.3
4,139,886	-		Echvi_3494	0.23	-2.1
4,139,910	-		Echvi_3494	0.25	+0.1
4,140,011	-		Echvi_3494	0.32	+0.1
4,140,011	-		Echvi_3494	0.32	+0.3
4,140,011	-		Echvi_3494	0.32	+0.1
4,140,021	+		Echvi_3494	0.33	-0.7
4,140,021	+		Echvi_3494	0.33	-0.4
4,140,021	+		Echvi_3494	0.33	-0.0
4,140,021	+		Echvi_3494	0.33	-1.0
4,140,022	-		Echvi_3494	0.33	-1.1
4,140,022	-		Echvi_3494	0.33	+2.4
4,140,027	+		Echvi_3494	0.33	-0.6
4,140,027	+		Echvi_3494	0.33	+1.1
4,140,028	-		Echvi_3494	0.33	-0.3
4,140,030	+		Echvi_3494	0.33	-1.0
4,140,030	+		Echvi_3494	0.33	-0.1
4,140,030	+		Echvi_3494	0.33	+1.4
4,140,031	-		Echvi_3494	0.33	-0.8
4,140,031	-		Echvi_3494	0.33	-0.3
4,140,033	+		Echvi_3494	0.33	-0.6
4,140,088	+		Echvi_3494	0.37	-2.2
4,140,088	+		Echvi_3494	0.37	+0.2
4,140,088	+		Echvi_3494	0.37	-0.8
4,140,089	-		Echvi_3494	0.37	-0.9
4,140,089	-		Echvi_3494	0.37	+0.0
4,140,091	-		Echvi_3494	0.37	-1.7
4,140,154	+		Echvi_3494	0.42	-1.3
4,140,160	-		Echvi_3494	0.42	+0.2
4,140,173	+		Echvi_3494	0.43	-1.3
4,140,192	+		Echvi_3494	0.45	-1.7
4,140,212	+		Echvi_3494	0.46	-0.4
4,140,212	+		Echvi_3494	0.46	-0.5
4,140,219	+		Echvi_3494	0.46	-1.2
4,140,220	-		Echvi_3494	0.47	+0.2
4,140,220	-		Echvi_3494	0.47	+0.2
4,140,280	-		Echvi_3494	0.51	+0.3
4,140,280	-		Echvi_3494	0.51	-0.9
4,140,288	+		Echvi_3494	0.51	-2.0
4,140,289	-		Echvi_3494	0.51	+0.4
4,140,360	+		Echvi_3494	0.56	+0.9
4,140,426	+		Echvi_3494	0.61	-0.3
4,140,426	+		Echvi_3494	0.61	-0.8
4,140,426	+		Echvi_3494	0.61	-0.9
4,140,427	-		Echvi_3494	0.61	-0.9
4,140,427	-		Echvi_3494	0.61	-1.0
4,140,427	-		Echvi_3494	0.61	-0.7
4,140,434	-		Echvi_3494	0.62	+0.8
4,140,462	+		Echvi_3494	0.64	+0.3
4,140,463	-		Echvi_3494	0.64	+0.1
4,140,463	-		Echvi_3494	0.64	-1.5
4,140,463	-		Echvi_3494	0.64	-0.9
4,140,474	-		Echvi_3494	0.64	-0.6
4,140,515	+		Echvi_3494	0.67	+0.7
4,140,516	-		Echvi_3494	0.67	-0.5
4,140,546	-		Echvi_3494	0.69	-0.0
4,140,562	-		Echvi_3494	0.71	-0.3
4,140,583	+		Echvi_3494	0.72	+0.4
4,140,583	+		Echvi_3494	0.72	-0.4
4,140,584	-		Echvi_3494	0.72	+1.5
4,140,584	-		Echvi_3494	0.72	-1.5
4,140,584	-		Echvi_3494	0.72	-1.0
4,140,584	-		Echvi_3494	0.72	-0.1
4,140,584	-		Echvi_3494	0.72	+0.2
4,140,596	-		Echvi_3494	0.73	-0.4
4,140,596	-		Echvi_3494	0.73	-0.6
4,140,708	+		Echvi_3494	0.81	+0.3
4,140,714	+		Echvi_3494	0.81	-0.9
4,140,748	-		Echvi_3494	0.84	+0.6
4,140,802	+		Echvi_3494	0.87	+0.7
4,140,802	+		Echvi_3494	0.87	+1.0
4,140,803	-		Echvi_3494	0.88	+0.2
4,140,803	-		Echvi_3494	0.88	-1.4
4,140,933	-				+0.3
4,140,933	-				+0.2
4,140,944	+				+0.1
4,140,945	-				+0.9
4,140,945	-				-0.9
4,140,947	-				-1.2
4,140,973	+				-0.5
4,140,987	+				+0.4
4,140,988	-				-1.2
4,140,988	-				-0.7
4,141,101	+				+0.2
4,141,164	+				+0.9
4,141,164	+				+0.2
4,141,165	-				+0.6
4,141,165	-				+0.0
4,141,171	-				+1.1
4,141,307	+				-0.4
4,141,307	+				-1.5
4,141,400	+		Echvi_3495	0.15	-0.0
4,141,400	+		Echvi_3495	0.15	+0.8
4,141,400	+		Echvi_3495	0.15	+0.0
4,141,401	-		Echvi_3495	0.15	-0.3
4,141,401	-		Echvi_3495	0.15	-1.7
4,141,427	+		Echvi_3495	0.17	+1.3
4,141,509	-		Echvi_3495	0.25	-1.8
4,141,529	+		Echvi_3495	0.27	-2.0
4,141,773	+		Echvi_3495	0.51	+0.2
4,141,774	-		Echvi_3495	0.51	+0.9
4,141,799	+		Echvi_3495	0.54	-0.4
4,141,857	+		Echvi_3495	0.59	+0.6
4,141,859	+		Echvi_3495	0.60	-0.5
4,141,859	+		Echvi_3495	0.60	-0.6
4,141,859	+		Echvi_3495	0.60	-0.1
4,141,860	-		Echvi_3495	0.60	-0.6
4,141,860	-		Echvi_3495	0.60	-0.8
4,141,860	-		Echvi_3495	0.60	-0.5
4,141,861	-		Echvi_3495	0.60	-0.5
4,141,884	-		Echvi_3495	0.62	+0.1
4,141,899	-		Echvi_3495	0.63	+0.7