Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3381

Experiment: m.b. nitrite 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 10 mM
3,987,665	-				+0.2
3,987,665	-				-1.2
3,987,669	-				-0.5
3,987,715	+				-0.9
3,987,716	-				-1.0
3,987,723	+				-0.6
3,987,723	+				-1.5
3,987,723	+				+0.2
3,987,723	+				-0.7
3,987,723	+				-0.4
3,987,723	+				-0.2
3,987,724	-				-0.9
3,987,724	-				-1.8
3,987,724	-				-1.1
3,987,724	-				-2.9
3,987,725	+				-1.0
3,987,725	+				+0.6
3,987,725	+				-2.1
3,987,725	+				-1.0
3,987,734	-				-0.5
3,987,734	-				+0.1
3,987,755	-				-1.5
3,987,755	-				-2.2
3,987,755	-				-0.2
3,987,757	+				-0.2
3,987,760	+				-3.2
3,987,761	-				+0.3
3,987,836	-				+1.0
3,987,837	+				+3.0
3,987,838	-				-0.2
3,987,897	+				+0.1
3,987,898	-				-1.5
3,987,898	-				-0.4
3,987,932	-				-0.9
3,987,937	-				+1.0
3,987,937	-				+1.5
3,987,937	-				-0.5
3,987,947	+				-1.1
3,987,997	+				-0.9
3,987,997	+				-1.8
3,987,997	+				-0.0
3,987,998	-				+0.4
3,987,998	-				+0.0
3,987,998	-				-0.5
3,988,006	+				-0.5
3,988,011	+				+0.2
3,988,011	+				+0.2
3,988,012	-				+0.4
3,988,012	-				+0.9
3,988,020	-				+1.2
3,988,032	-				+0.5
3,988,032	-				-0.0
3,988,101	-				+0.5
3,988,121	+				+0.3
3,988,121	+				-1.1
3,988,122	-				-1.7
3,988,122	-				+1.7
3,988,122	-				+0.3
3,988,182	+				+0.3
3,988,183	-				+0.6
3,988,298	+				+0.1
3,988,299	-				-1.3
3,988,299	-				-0.4
3,988,314	-				-1.7
3,988,332	+				-1.3
3,988,332	+				-2.6
3,988,332	+				-0.6
3,988,467	+				-1.8
3,988,467	+				+1.3
3,988,469	+				+0.6
3,988,543	-		Echvi_3381	0.10	-1.0
3,988,543	-		Echvi_3381	0.10	+0.3
3,988,543	-		Echvi_3381	0.10	+0.4
3,988,678	+		Echvi_3381	0.14	-0.4
3,988,678	+		Echvi_3381	0.14	-0.8
3,988,678	+		Echvi_3381	0.14	-1.1
3,988,679	-		Echvi_3381	0.14	-1.0
3,988,679	-		Echvi_3381	0.14	-0.9
3,988,713	+		Echvi_3381	0.16	-3.0
3,988,713	+		Echvi_3381	0.16	-1.6
3,988,713	+		Echvi_3381	0.16	-1.5
3,988,713	+		Echvi_3381	0.16	-0.5
3,988,713	+		Echvi_3381	0.16	-1.8
3,988,714	-		Echvi_3381	0.16	-0.2
3,988,714	-		Echvi_3381	0.16	+0.0
3,988,714	-		Echvi_3381	0.16	-1.6
3,988,739	-		Echvi_3381	0.16	-0.5
3,988,739	-		Echvi_3381	0.16	-0.9
3,988,769	+		Echvi_3381	0.17	+0.2
3,988,769	+		Echvi_3381	0.17	-1.9
3,988,786	+		Echvi_3381	0.18	-0.0
3,988,828	+		Echvi_3381	0.19	-2.5
3,988,828	+		Echvi_3381	0.19	-0.5
3,988,829	-		Echvi_3381	0.19	-2.1
3,988,829	-		Echvi_3381	0.19	-2.5
3,988,829	-		Echvi_3381	0.19	-0.5
3,988,832	-		Echvi_3381	0.19	-1.0
3,988,866	+		Echvi_3381	0.21	-2.2
3,988,867	-		Echvi_3381	0.21	-0.5
3,989,007	+		Echvi_3381	0.25	-1.6
3,989,061	-		Echvi_3381	0.27	-1.9
3,989,126	+		Echvi_3381	0.29	-0.4
3,989,126	+		Echvi_3381	0.29	-2.0
3,989,127	-		Echvi_3381	0.29	-3.4
3,989,127	-		Echvi_3381	0.29	-1.5
3,989,127	-		Echvi_3381	0.29	-0.9
3,989,162	+		Echvi_3381	0.30	-0.8
3,989,162	+		Echvi_3381	0.30	-1.1
3,989,225	+		Echvi_3381	0.32	-0.7
3,989,243	+		Echvi_3381	0.33	-1.9
3,989,244	-		Echvi_3381	0.33	-0.9
3,989,251	+		Echvi_3381	0.33	-0.0
3,989,270	-		Echvi_3381	0.34	-0.9
3,989,344	+		Echvi_3381	0.36	-0.2
3,989,344	+		Echvi_3381	0.36	-2.0
3,989,344	+		Echvi_3381	0.36	-1.4
3,989,344	+		Echvi_3381	0.36	-0.8
3,989,345	-		Echvi_3381	0.36	+2.0
3,989,346	+		Echvi_3381	0.36	-1.1
3,989,346	+		Echvi_3381	0.36	-0.2
3,989,346	+		Echvi_3381	0.36	-2.3
3,989,347	-		Echvi_3381	0.36	-1.0
3,989,352	+		Echvi_3381	0.37	-0.8
3,989,353	-		Echvi_3381	0.37	-1.0
3,989,353	-		Echvi_3381	0.37	-1.0
3,989,353	-		Echvi_3381	0.37	-2.6
3,989,353	-		Echvi_3381	0.37	+0.3
3,989,390	+		Echvi_3381	0.38	-0.4
3,989,395	-		Echvi_3381	0.38	-0.5
3,989,396	+		Echvi_3381	0.38	+0.4
3,989,396	+		Echvi_3381	0.38	-1.0
3,989,396	+		Echvi_3381	0.38	-0.6
3,989,397	-		Echvi_3381	0.38	-0.8
3,989,397	-		Echvi_3381	0.38	-0.3
3,989,433	-		Echvi_3381	0.39	-1.3
3,989,465	-		Echvi_3381	0.40	-0.8
3,989,465	-		Echvi_3381	0.40	-2.1
3,989,492	-		Echvi_3381	0.41	+0.6
3,989,655	+		Echvi_3381	0.46	-1.4
3,989,722	-		Echvi_3381	0.49	-0.9
3,989,737	+		Echvi_3381	0.49	-0.7
3,989,745	+		Echvi_3381	0.49	+0.0
3,989,746	-		Echvi_3381	0.49	-0.6
3,989,746	-		Echvi_3381	0.49	-0.9
3,989,815	+		Echvi_3381	0.52	-3.1
3,989,815	+		Echvi_3381	0.52	-1.1
3,989,816	-		Echvi_3381	0.52	-1.3
3,989,816	-		Echvi_3381	0.52	-0.2
3,989,871	+		Echvi_3381	0.54	-2.6
3,989,871	+		Echvi_3381	0.54	-0.4
3,989,871	+		Echvi_3381	0.54	-0.2
3,989,872	-		Echvi_3381	0.54	-0.6
3,989,877	+		Echvi_3381	0.54	+0.4
3,989,877	+		Echvi_3381	0.54	-0.7
3,989,878	-		Echvi_3381	0.54	+0.2
3,989,878	-		Echvi_3381	0.54	-0.2
3,989,882	+		Echvi_3381	0.54	-1.2
3,989,900	+		Echvi_3381	0.54	-2.9
3,989,901	-		Echvi_3381	0.55	-0.6
3,989,926	+		Echvi_3381	0.55	-1.5
3,989,926	+		Echvi_3381	0.55	-1.3
3,989,927	-		Echvi_3381	0.55	-1.0
3,989,927	-		Echvi_3381	0.55	-0.8
3,989,927	-		Echvi_3381	0.55	-1.6
3,989,927	-		Echvi_3381	0.55	+0.1
3,989,929	+		Echvi_3381	0.55	-0.5
3,989,929	+		Echvi_3381	0.55	-1.3
3,989,930	-		Echvi_3381	0.55	-1.5
3,990,006	-		Echvi_3381	0.58	-0.5
3,990,075	-		Echvi_3381	0.60	+0.8
3,990,075	-		Echvi_3381	0.60	-0.6
3,990,112	+		Echvi_3381	0.61	-0.9
3,990,113	-		Echvi_3381	0.61	+0.1
3,990,113	-		Echvi_3381	0.61	-1.6
3,990,134	-		Echvi_3381	0.62	-2.7
3,990,134	-		Echvi_3381	0.62	-0.0
3,990,135	+		Echvi_3381	0.62	-1.0
3,990,135	+		Echvi_3381	0.62	-0.7
3,990,136	-		Echvi_3381	0.62	-0.0
3,990,136	-		Echvi_3381	0.62	-0.2
3,990,136	-		Echvi_3381	0.62	+0.8
3,990,136	-		Echvi_3381	0.62	-1.3
3,990,144	-		Echvi_3381	0.62	-1.1
3,990,144	-		Echvi_3381	0.62	-1.7
3,990,154	+		Echvi_3381	0.63	-0.8
3,990,154	+		Echvi_3381	0.63	+1.6
3,990,154	+		Echvi_3381	0.63	-0.6
3,990,154	+		Echvi_3381	0.63	-0.6
3,990,154	+		Echvi_3381	0.63	+0.5
3,990,155	-		Echvi_3381	0.63	-2.0
3,990,155	-		Echvi_3381	0.63	-1.1
3,990,155	-		Echvi_3381	0.63	-0.5
3,990,172	+		Echvi_3381	0.63	-0.7
3,990,173	-		Echvi_3381	0.63	-1.5
3,990,175	-		Echvi_3381	0.63	-0.8
3,990,346	-		Echvi_3381	0.69	-2.0
3,990,346	-		Echvi_3381	0.69	+0.4
3,990,346	-		Echvi_3381	0.69	-0.3
3,990,354	+		Echvi_3381	0.69	-0.7
3,990,406	+		Echvi_3381	0.71	-1.7
3,990,407	-		Echvi_3381	0.71	-0.4
3,990,407	-		Echvi_3381	0.71	-0.8
3,990,407	-		Echvi_3381	0.71	-1.6
3,990,409	+		Echvi_3381	0.71	-0.1
3,990,410	-		Echvi_3381	0.71	-0.4
3,990,478	+		Echvi_3381	0.73	-1.2
3,990,479	-		Echvi_3381	0.73	-1.5
3,990,479	-		Echvi_3381	0.73	-1.1
3,990,479	-		Echvi_3381	0.73	-2.5
3,990,485	+		Echvi_3381	0.74	-2.5
3,990,485	+		Echvi_3381	0.74	-0.1
3,990,485	+		Echvi_3381	0.74	-0.8
3,990,486	-		Echvi_3381	0.74	+1.4
3,990,486	-		Echvi_3381	0.74	-1.3
3,990,503	+		Echvi_3381	0.74	-0.3
3,990,504	-		Echvi_3381	0.74	-0.9
3,990,539	+		Echvi_3381	0.75	-1.5
3,990,540	-		Echvi_3381	0.75	-0.1
3,990,540	-		Echvi_3381	0.75	+0.4
3,990,564	+		Echvi_3381	0.76	-1.1
3,990,564	+		Echvi_3381	0.76	+0.3
3,990,564	+		Echvi_3381	0.76	-2.0
3,990,565	-		Echvi_3381	0.76	+0.5
3,990,604	+		Echvi_3381	0.78	-0.2
3,990,605	-		Echvi_3381	0.78	-1.8
3,990,646	+		Echvi_3381	0.79	-0.2
3,990,646	+		Echvi_3381	0.79	-0.2
3,990,647	-		Echvi_3381	0.79	-2.9
3,990,647	-		Echvi_3381	0.79	-1.4
3,990,651	+		Echvi_3381	0.79	-0.2
3,990,652	-		Echvi_3381	0.79	-0.3
3,990,656	+		Echvi_3381	0.79	+0.8
3,990,657	-		Echvi_3381	0.79	-0.7
3,990,657	-		Echvi_3381	0.79	-0.4
3,990,657	-		Echvi_3381	0.79	-1.2
3,990,661	+		Echvi_3381	0.79	-0.7
3,990,662	-		Echvi_3381	0.79	+0.3
3,990,662	-		Echvi_3381	0.79	+0.1
3,990,662	-		Echvi_3381	0.79	-0.6
3,990,686	+		Echvi_3381	0.80	-0.6
3,990,687	-		Echvi_3381	0.80	-0.7
3,990,687	-		Echvi_3381	0.80	-0.2
3,990,692	+		Echvi_3381	0.80	-0.4
3,990,693	-		Echvi_3381	0.80	-1.9
3,990,693	-		Echvi_3381	0.80	-0.5
3,990,693	-		Echvi_3381	0.80	-0.9
3,990,697	-		Echvi_3381	0.81	-0.7
3,990,715	-		Echvi_3381	0.81	+0.3
3,990,779	+		Echvi_3381	0.83	+0.0
3,990,780	-		Echvi_3381	0.83	-0.1
3,990,782	+		Echvi_3381	0.83	-1.8
3,990,782	+		Echvi_3381	0.83	-4.4
3,990,904	-		Echvi_3381	0.87	-1.5
3,990,904	-		Echvi_3381	0.87	-0.4
3,990,983	-		Echvi_3381	0.90	-0.8
3,991,066	+				-1.7
3,991,066	+				-0.2
3,991,067	-				-0.8
3,991,226	-				-2.5
3,991,230	-				-0.6
3,991,231	+				-0.1
3,991,232	-				-0.2
3,991,248	-				-0.0
3,991,250	+				-1.0
3,991,251	-				+0.4
3,991,259	+				+0.9
3,991,266	-				-1.2
3,991,274	+				+1.4
3,991,275	-				+0.4
3,991,329	+				+1.9
3,991,330	-				-0.9
3,991,330	-				-0.5
3,991,351	-		Echvi_3382	0.15	-0.8
3,991,577	+				-0.5
3,991,577	+				-2.7
3,991,578	-				-0.3
3,991,578	-				-1.0
3,991,578	-				+0.6
3,991,587	+				-0.5