Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3247

Experiment: m.b. nitrite 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 10 mM
3,848,861	-		Echvi_3245	0.84	-0.0
3,848,887	+				-0.6
3,848,887	+				-0.7
3,848,888	-				-0.6
3,848,888	-				+1.0
3,848,888	-				-0.2
3,848,888	-				-1.0
3,848,888	-				-0.3
3,848,888	-				-1.0
3,848,888	-				+0.6
3,848,894	+				-0.3
3,848,895	-				+0.2
3,848,916	+				+0.2
3,848,924	+				+0.3
3,848,925	-				-0.3
3,848,998	-				-0.3
3,849,007	-				+0.6
3,849,021	+				+0.6
3,849,043	+				-0.5
3,849,044	-				-0.6
3,849,117	+				-1.9
3,849,276	+		Echvi_3246	0.76	+0.5
3,849,278	+		Echvi_3246	0.77	-1.8
3,849,312	-				-1.1
3,849,312	-				+2.4
3,849,404	-				-0.5
3,849,408	-				-1.0
3,849,456	+				+0.5
3,849,479	-				+0.2
3,849,559	+				-0.7
3,849,621	+				+0.1
3,849,625	+				+1.0
3,849,626	-				+0.2
3,849,761	-				+0.1
3,849,761	-				+0.1
3,849,771	+				-0.7
3,849,772	-				+0.2
3,849,772	-				-0.1
3,849,772	-				+0.9
3,849,772	-				-0.1
3,849,772	-				+0.7
3,849,772	-				+0.0
3,849,772	-				+0.2
3,849,773	+				+0.8
3,849,773	+				+1.0
3,849,801	+				+0.5
3,849,802	-				+0.8
3,849,860	-				+0.6
3,849,860	-				-1.5
3,849,860	-				-0.7
3,849,892	+				-1.7
3,849,892	+				-0.2
3,849,960	-				-1.4
3,849,998	+				-1.9
3,849,999	-				+0.7
3,850,002	+				-0.4
3,850,002	+				-0.0
3,850,002	+				+0.5
3,850,002	+				-0.0
3,850,002	+				+0.7
3,850,003	-				-0.8
3,850,003	-				+0.2
3,850,003	-				-0.9
3,850,003	-				-0.7
3,850,003	-				+0.3
3,850,003	-				+0.4
3,850,003	-				+0.1
3,850,003	-				-0.6
3,850,003	-				+0.8
3,850,004	+				+0.4
3,850,004	+				+0.7
3,850,005	-				+0.3
3,850,005	-				+0.6
3,850,005	-				+0.2
3,850,006	+				+0.7
3,850,022	+				+3.0
3,850,022	+				-0.3
3,850,023	-				-0.2
3,850,023	-				+1.3
3,850,168	-		Echvi_3247	0.14	-0.6
3,850,237	+		Echvi_3247	0.17	+0.5
3,850,249	-		Echvi_3247	0.17	+2.1
3,850,249	-		Echvi_3247	0.17	+0.3
3,850,249	-		Echvi_3247	0.17	+0.4
3,850,273	-		Echvi_3247	0.18	-0.2
3,850,353	+		Echvi_3247	0.21	-0.2
3,850,485	+		Echvi_3247	0.26	-0.6
3,850,485	+		Echvi_3247	0.26	+1.8
3,850,620	-		Echvi_3247	0.31	+1.8
3,850,620	-		Echvi_3247	0.31	-0.4
3,850,694	+		Echvi_3247	0.33	+1.0
3,850,728	-		Echvi_3247	0.34	-0.7
3,850,754	-		Echvi_3247	0.35	+0.2
3,850,754	-		Echvi_3247	0.35	+0.6
3,850,811	+		Echvi_3247	0.37	+0.8
3,850,820	+		Echvi_3247	0.38	+1.2
3,850,820	+		Echvi_3247	0.38	-1.1
3,850,820	+		Echvi_3247	0.38	-1.3
3,850,821	-		Echvi_3247	0.38	-0.4
3,850,905	-		Echvi_3247	0.41	+0.9
3,851,042	-		Echvi_3247	0.46	+0.1
3,851,064	-		Echvi_3247	0.47	-1.4
3,851,105	+		Echvi_3247	0.48	+1.5
3,851,106	-		Echvi_3247	0.48	+0.1
3,851,106	-		Echvi_3247	0.48	+1.1
3,851,106	-		Echvi_3247	0.48	+0.1
3,851,106	-		Echvi_3247	0.48	-1.1
3,851,113	+		Echvi_3247	0.48	+0.9
3,851,114	-		Echvi_3247	0.48	-0.1
3,851,139	-		Echvi_3247	0.49	+0.2
3,851,178	+		Echvi_3247	0.51	+1.6
3,851,178	+		Echvi_3247	0.51	+0.0
3,851,179	-		Echvi_3247	0.51	+0.8
3,851,191	+		Echvi_3247	0.51	+0.5
3,851,214	-		Echvi_3247	0.52	+0.5
3,851,262	+		Echvi_3247	0.54	-2.0
3,851,262	+		Echvi_3247	0.54	+0.2
3,851,263	-		Echvi_3247	0.54	+0.5
3,851,263	-		Echvi_3247	0.54	+0.2
3,851,263	-		Echvi_3247	0.54	+0.6
3,851,263	-		Echvi_3247	0.54	+1.3
3,851,263	-		Echvi_3247	0.54	-1.5
3,851,363	+		Echvi_3247	0.57	-0.8
3,851,372	+		Echvi_3247	0.58	+0.4
3,851,372	+		Echvi_3247	0.58	+0.5
3,851,399	+		Echvi_3247	0.59	+0.4
3,851,400	-		Echvi_3247	0.59	-0.0
3,851,475	-		Echvi_3247	0.61	+1.0
3,851,475	-		Echvi_3247	0.61	-0.7
3,851,480	+		Echvi_3247	0.62	-0.5
3,851,480	+		Echvi_3247	0.62	+2.5
3,851,487	-		Echvi_3247	0.62	-1.5
3,851,497	+		Echvi_3247	0.62	-1.4
3,851,498	-		Echvi_3247	0.62	-0.5
3,851,498	-		Echvi_3247	0.62	-0.3
3,851,536	+		Echvi_3247	0.64	-2.1
3,851,543	-		Echvi_3247	0.64	+1.2
3,851,577	-		Echvi_3247	0.65	+0.5
3,851,687	+		Echvi_3247	0.69	+0.2
3,851,687	+		Echvi_3247	0.69	-0.4
3,851,688	-		Echvi_3247	0.69	+0.7
3,851,769	+		Echvi_3247	0.72	+0.9
3,851,769	+		Echvi_3247	0.72	-1.1
3,851,769	+		Echvi_3247	0.72	+1.8
3,851,804	+		Echvi_3247	0.73	+0.0
3,851,804	+		Echvi_3247	0.73	+0.0
3,851,804	+		Echvi_3247	0.73	+0.2
3,851,805	-		Echvi_3247	0.73	+0.5
3,851,821	+		Echvi_3247	0.74	-0.1
3,851,943	+		Echvi_3247	0.78	-0.5
3,851,943	+		Echvi_3247	0.78	+0.8
3,851,944	-		Echvi_3247	0.78	+0.3
3,851,944	-		Echvi_3247	0.78	+0.6
3,851,944	-		Echvi_3247	0.78	+2.8
3,852,000	+		Echvi_3247	0.80	-1.4
3,852,012	-		Echvi_3247	0.81	+0.1
3,852,019	-		Echvi_3247	0.81	-0.2
3,852,066	+		Echvi_3247	0.83	+1.8
3,852,067	-		Echvi_3247	0.83	-1.7
3,852,074	+		Echvi_3247	0.83	-0.2
3,852,075	-		Echvi_3247	0.83	+0.2
3,852,079	+		Echvi_3247	0.83	-1.0
3,852,094	-		Echvi_3247	0.84	-1.4
3,852,113	-		Echvi_3247	0.84	-1.7
3,852,113	-		Echvi_3247	0.84	+0.7
3,852,246	+		Echvi_3247	0.89	+0.8
3,852,288	-				-0.7
3,852,376	-				+0.5
3,852,376	-				+0.2
3,852,386	+				-0.9
3,852,433	+				+1.6
3,852,472	+				+0.1
3,852,557	-				-0.0
3,852,578	-				-1.8
3,852,592	-				-0.6
3,852,592	-				-0.3
3,852,594	-				-2.1
3,852,642	-				-0.2
3,852,642	-				-0.1
3,852,642	-				-1.0
3,852,729	+		Echvi_3248	0.11	-0.2
3,852,729	+		Echvi_3248	0.11	+1.1
3,852,733	+		Echvi_3248	0.11	+0.4
3,852,756	-		Echvi_3248	0.12	-0.3
3,852,756	-		Echvi_3248	0.12	+0.7
3,852,784	+		Echvi_3248	0.14	-0.1
3,852,784	+		Echvi_3248	0.14	-1.6
3,852,784	+		Echvi_3248	0.14	+1.9
3,852,784	+		Echvi_3248	0.14	-1.8
3,852,784	+		Echvi_3248	0.14	-0.9
3,852,784	+		Echvi_3248	0.14	+0.3
3,852,785	-		Echvi_3248	0.14	+0.1
3,852,785	-		Echvi_3248	0.14	-2.6
3,852,785	-		Echvi_3248	0.14	+0.6
3,852,785	-		Echvi_3248	0.14	-0.2
3,852,785	-		Echvi_3248	0.14	-0.5
3,852,788	+		Echvi_3248	0.14	+1.8
3,852,789	-		Echvi_3248	0.14	+0.2
3,852,848	+		Echvi_3248	0.18	-0.4
3,852,848	+		Echvi_3248	0.18	-1.5
3,852,849	-		Echvi_3248	0.18	-0.2
3,852,849	-		Echvi_3248	0.18	-0.1
3,852,868	-		Echvi_3248	0.19	+1.4
3,852,868	-		Echvi_3248	0.19	+0.4
3,852,892	+		Echvi_3248	0.20	+0.3
3,852,936	+		Echvi_3248	0.23	+0.9
3,852,937	-		Echvi_3248	0.23	-0.9
3,852,937	-		Echvi_3248	0.23	-1.0
3,852,937	-		Echvi_3248	0.23	-0.1
3,852,937	-		Echvi_3248	0.23	-1.7
3,852,937	-		Echvi_3248	0.23	-1.0
3,852,937	-		Echvi_3248	0.23	+1.4
3,852,937	-		Echvi_3248	0.23	-0.5
3,852,937	-		Echvi_3248	0.23	-1.2
3,852,938	+		Echvi_3248	0.23	+0.6
3,852,938	+		Echvi_3248	0.23	+1.1
3,852,938	+		Echvi_3248	0.23	+0.3
3,852,939	-		Echvi_3248	0.23	+0.5
3,852,939	-		Echvi_3248	0.23	+0.9
3,852,939	-		Echvi_3248	0.23	-1.7
3,852,939	-		Echvi_3248	0.23	+0.7
3,852,939	-		Echvi_3248	0.23	+1.4
3,852,969	-		Echvi_3248	0.25	+0.8
3,852,991	+		Echvi_3248	0.26	+1.7
3,853,017	-		Echvi_3248	0.27	-1.1
3,853,028	+		Echvi_3248	0.28	+0.8
3,853,034	-		Echvi_3248	0.28	+0.3
3,853,040	-		Echvi_3248	0.29	-0.4
3,853,040	-		Echvi_3248	0.29	-1.3
3,853,151	+		Echvi_3248	0.35	-1.1
3,853,160	-		Echvi_3248	0.36	-0.0
3,853,244	+		Echvi_3248	0.40	+0.6
3,853,265	+				+0.7
3,853,265	+		Echvi_3248	0.42	-0.9
3,853,265	+		Echvi_3248	0.42	+0.3
3,853,265	+		Echvi_3248	0.42	+2.3
3,853,265	+		Echvi_3248	0.42	-0.5
3,853,265	+		Echvi_3248	0.42	-1.4
3,853,265	+		Echvi_3248	0.42	-1.3
3,853,266	-		Echvi_3248	0.42	-1.1
3,853,270	+		Echvi_3248	0.42	+0.4
3,853,271	-		Echvi_3248	0.42	+0.1
3,853,321	+		Echvi_3248	0.45	-2.1
3,853,321	+		Echvi_3248	0.45	+0.0
3,853,322	-		Echvi_3248	0.45	-1.2
3,853,328	+		Echvi_3248	0.45	+0.1
3,853,328	+		Echvi_3248	0.45	-0.5
3,853,329	-		Echvi_3248	0.45	+0.9
3,853,371	-		Echvi_3248	0.48	-0.2
3,853,384	-		Echvi_3248	0.49	-0.2
3,853,427	-		Echvi_3248	0.51	-0.1
3,853,464	-		Echvi_3248	0.53	+0.1
3,853,503	+		Echvi_3248	0.55	-0.4
3,853,503	+		Echvi_3248	0.55	-0.7
3,853,503	+		Echvi_3248	0.55	-0.5
3,853,504	-		Echvi_3248	0.56	+0.2
3,853,504	-		Echvi_3248	0.56	+0.8
3,853,505	+		Echvi_3248	0.56	+0.3
3,853,506	-		Echvi_3248	0.56	+0.1
3,853,506	-		Echvi_3248	0.56	+0.2
3,853,506	-		Echvi_3248	0.56	-0.2
3,853,517	-		Echvi_3248	0.56	+0.2