Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2676

Experiment: m.b. nitrite 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 10 mM
3,179,976	+		Echvi_2675	0.76	+3.0
3,180,006	+		Echvi_2675	0.77	+0.1
3,180,006	+		Echvi_2675	0.77	+0.0
3,180,006	+		Echvi_2675	0.77	-0.1
3,180,007	-		Echvi_2675	0.77	+1.3
3,180,007	-		Echvi_2675	0.77	+0.7
3,180,007	-		Echvi_2675	0.77	-1.2
3,180,010	-		Echvi_2675	0.77	-0.8
3,180,051	-		Echvi_2675	0.79	-2.8
3,180,073	+		Echvi_2675	0.80	-1.6
3,180,073	+		Echvi_2675	0.80	+0.8
3,180,074	-		Echvi_2675	0.80	-0.6
3,180,074	-		Echvi_2675	0.80	-0.2
3,180,074	-		Echvi_2675	0.80	-0.2
3,180,103	+		Echvi_2675	0.81	-0.4
3,180,104	-		Echvi_2675	0.81	+2.1
3,180,104	-		Echvi_2675	0.81	+0.4
3,180,104	-		Echvi_2675	0.81	+0.3
3,180,104	-		Echvi_2675	0.81	+0.0
3,180,104	-		Echvi_2675	0.81	-0.1
3,180,104	-		Echvi_2675	0.81	+0.3
3,180,142	+		Echvi_2675	0.82	+1.8
3,180,147	+		Echvi_2675	0.82	-0.0
3,180,163	+		Echvi_2675	0.83	+0.4
3,180,163	+		Echvi_2675	0.83	-0.3
3,180,164	-		Echvi_2675	0.83	+0.2
3,180,169	+		Echvi_2675	0.83	-1.0
3,180,170	-		Echvi_2675	0.83	+0.2
3,180,211	-		Echvi_2675	0.85	-1.7
3,180,211	-		Echvi_2675	0.85	+0.8
3,180,214	+		Echvi_2675	0.85	+0.1
3,180,215	-		Echvi_2675	0.85	-0.9
3,180,215	-		Echvi_2675	0.85	-0.7
3,180,215	-		Echvi_2675	0.85	-0.2
3,180,215	-		Echvi_2675	0.85	-1.5
3,180,217	-		Echvi_2675	0.85	-0.4
3,180,232	-		Echvi_2675	0.86	+0.7
3,180,240	-		Echvi_2675	0.86	-2.0
3,180,275	+		Echvi_2675	0.87	-0.6
3,180,297	+		Echvi_2675	0.88	-0.2
3,180,297	+		Echvi_2675	0.88	+0.1
3,180,298	-		Echvi_2675	0.88	+1.8
3,180,300	+		Echvi_2675	0.88	+1.0
3,180,342	-		Echvi_2675	0.90	+0.1
3,180,439	-				-0.6
3,180,444	-				-0.2
3,180,593	+				-0.4
3,180,593	+				+0.3
3,180,594	-				+0.2
3,180,621	-				+0.1
3,180,621	-				-0.0
3,180,623	-				+0.6
3,180,630	+				-2.5
3,180,673	-				+0.5
3,180,798	-				+0.1
3,180,884	+				+0.6
3,180,885	-				+0.9
3,180,885	-				+1.4
3,180,904	+				-1.0
3,180,904	+				-1.0
3,180,904	+				-0.4
3,180,904	+				+0.6
3,180,920	+				-0.8
3,181,024	+				-2.1
3,181,024	+				+0.0
3,181,025	-				+0.5
3,181,058	-				-0.9
3,181,064	-				+0.1
3,181,064	-				+1.1
3,181,094	+				-0.6
3,181,094	+				+0.2
3,181,094	+				-0.5
3,181,094	+				+0.3
3,181,095	-				+0.4
3,181,095	-				-0.2
3,181,120	+		Echvi_2676	0.11	-1.5
3,181,157	+		Echvi_2676	0.13	-2.1
3,181,160	+		Echvi_2676	0.13	+0.3
3,181,164	+		Echvi_2676	0.14	-0.9
3,181,164	+		Echvi_2676	0.14	+1.3
3,181,192	-		Echvi_2676	0.15	-0.1
3,181,213	-		Echvi_2676	0.16	+1.4
3,181,213	-		Echvi_2676	0.16	-0.1
3,181,214	+		Echvi_2676	0.16	+0.4
3,181,215	-		Echvi_2676	0.16	-0.3
3,181,339	-		Echvi_2676	0.23	-0.5
3,181,389	+		Echvi_2676	0.26	-1.3
3,181,404	+		Echvi_2676	0.26	+1.2
3,181,405	-		Echvi_2676	0.26	+0.2
3,181,405	-		Echvi_2676	0.26	+0.5
3,181,552	-		Echvi_2676	0.34	-1.4
3,181,619	+		Echvi_2676	0.38	-0.9
3,181,619	+		Echvi_2676	0.38	-1.1
3,181,619	+		Echvi_2676	0.38	-2.0
3,181,619	+		Echvi_2676	0.38	-1.1
3,181,619	+		Echvi_2676	0.38	+0.8
3,181,620	-		Echvi_2676	0.38	-1.0
3,181,663	+		Echvi_2676	0.40	+0.4
3,181,663	+		Echvi_2676	0.40	-2.2
3,181,688	+		Echvi_2676	0.41	+0.1
3,181,731	+		Echvi_2676	0.44	+0.4
3,181,731	+		Echvi_2676	0.44	+0.7
3,181,731	+		Echvi_2676	0.44	+0.7
3,181,732	-		Echvi_2676	0.44	-0.5
3,181,732	-		Echvi_2676	0.44	-1.2
3,181,732	-		Echvi_2676	0.44	-1.5
3,181,733	+		Echvi_2676	0.44	-0.8
3,181,733	+		Echvi_2676	0.44	-1.3
3,181,733	+		Echvi_2676	0.44	-0.9
3,181,733	+		Echvi_2676	0.44	-0.2
3,181,733	+		Echvi_2676	0.44	+1.5
3,181,733	+		Echvi_2676	0.44	+3.1
3,181,733	+		Echvi_2676	0.44	+1.1
3,181,733	+		Echvi_2676	0.44	-0.6
3,181,733	+		Echvi_2676	0.44	+1.1
3,181,733	+		Echvi_2676	0.44	-0.4
3,181,733	+		Echvi_2676	0.44	+1.0
3,181,733	+		Echvi_2676	0.44	-3.2
3,181,733	+		Echvi_2676	0.44	+0.8
3,181,734	-		Echvi_2676	0.44	-1.4
3,181,734	-		Echvi_2676	0.44	-0.2
3,181,734	-		Echvi_2676	0.44	-0.4
3,181,734	-		Echvi_2676	0.44	-0.6
3,181,734	-		Echvi_2676	0.44	-1.5
3,181,734	-		Echvi_2676	0.44	+0.3
3,181,734	-		Echvi_2676	0.44	+1.1
3,181,734	-		Echvi_2676	0.44	-1.1
3,181,734	-		Echvi_2676	0.44	+0.1
3,181,734	-		Echvi_2676	0.44	+2.4
3,181,766	+		Echvi_2676	0.46	+0.6
3,181,776	+		Echvi_2676	0.46	+1.4
3,181,776	+		Echvi_2676	0.46	-0.9
3,181,776	+		Echvi_2676	0.46	+0.1
3,181,776	+		Echvi_2676	0.46	-0.1
3,181,777	-		Echvi_2676	0.46	+1.0
3,181,777	-		Echvi_2676	0.46	-0.8
3,181,777	-		Echvi_2676	0.46	-0.6
3,181,777	-		Echvi_2676	0.46	+0.2
3,181,841	-		Echvi_2676	0.50	-0.0
3,181,843	+		Echvi_2676	0.50	-0.9
3,181,844	-		Echvi_2676	0.50	+0.2
3,181,856	-		Echvi_2676	0.50	-0.5
3,181,863	+		Echvi_2676	0.51	-0.8
3,181,864	-		Echvi_2676	0.51	-2.4
3,181,864	-		Echvi_2676	0.51	+0.4
3,181,929	+		Echvi_2676	0.54	-1.3
3,181,929	+		Echvi_2676	0.54	-1.6
3,181,930	-		Echvi_2676	0.54	-1.0
3,181,930	-		Echvi_2676	0.54	-1.0
3,182,034	+		Echvi_2676	0.60	-1.0
3,182,077	+		Echvi_2676	0.62	+0.3
3,182,077	+		Echvi_2676	0.62	+0.9
3,182,078	-		Echvi_2676	0.62	-0.9
3,182,078	-		Echvi_2676	0.62	-1.5
3,182,078	-		Echvi_2676	0.62	+0.5
3,182,078	-		Echvi_2676	0.62	-0.2
3,182,082	-		Echvi_2676	0.62	+1.7
3,182,173	+		Echvi_2676	0.67	+1.3
3,182,191	+		Echvi_2676	0.68	+0.1
3,182,192	-		Echvi_2676	0.68	-0.7
3,182,192	-		Echvi_2676	0.68	-0.4
3,182,192	-		Echvi_2676	0.68	+0.1
3,182,240	+		Echvi_2676	0.71	+1.0
3,182,247	+		Echvi_2676	0.71	+0.1
3,182,247	+		Echvi_2676	0.71	+1.5
3,182,248	-		Echvi_2676	0.71	-0.5
3,182,262	+		Echvi_2676	0.72	-0.1
3,182,263	-		Echvi_2676	0.72	-2.1
3,182,330	+		Echvi_2676	0.76	+0.7
3,182,501	+		Echvi_2676	0.85	+0.1
3,182,510	+		Echvi_2676	0.85	-1.7
3,182,510	+		Echvi_2676	0.85	+0.0
3,182,511	-		Echvi_2676	0.85	-1.7
3,182,596	+		Echvi_2676	0.90	+0.8
3,182,597	-		Echvi_2676	0.90	+0.8
3,182,597	-		Echvi_2676	0.90	+0.3
3,182,598	+		Echvi_2676	0.90	+0.2
3,182,598	+		Echvi_2676	0.90	-1.1
3,182,599	-		Echvi_2676	0.90	+0.6
3,182,632	+				+0.8
3,182,633	-				+0.1
3,182,673	-				-1.1
3,182,719	+				-1.3
3,182,719	+				+0.1
3,182,720	-				+1.1
3,182,720	-				+0.1
3,182,780	-				-1.0
3,182,782	+				+0.7
3,182,782	+				+1.6
3,182,783	-				-1.4
3,182,783	-				-0.6
3,182,804	-				-0.2
3,182,804	-				+0.4
3,182,845	-				-0.2
3,182,855	-				-0.6
3,182,862	+				+0.0
3,182,862	+				+0.2
3,182,862	+				+0.1
3,182,879	+				-0.0
3,182,879	+				-0.6
3,182,917	-				-0.3
3,182,942	+				+0.1
3,182,948	+				-0.8
3,182,949	-				-2.6
3,182,949	-				-0.1
3,182,949	-				+0.0
3,182,994	+				+0.7
3,182,999	+				+0.5
3,183,003	+				+0.5
3,183,011	-				-0.9
3,183,074	-				+0.6
3,183,092	-				+0.7
3,183,230	+				-0.8
3,183,264	-				+3.0
3,183,264	-				-1.2
3,183,264	-				+0.7
3,183,264	-				-0.7
3,183,289	+				+0.9
3,183,299	-				+0.9
3,183,320	+				+2.2
3,183,320	+				-0.3
3,183,329	+				-0.6
3,183,332	+				-3.1
3,183,332	+				+0.0
3,183,333	-				-0.3
3,183,341	+				+0.5
3,183,341	+				+0.5
3,183,342	-				+0.0
3,183,342	-				-0.1
3,183,407	-				+0.4
3,183,423	-		Echvi_2677	0.10	-0.3
3,183,487	-		Echvi_2677	0.16	+0.5
3,183,581	-		Echvi_2677	0.24	-0.1
3,183,624	+		Echvi_2677	0.28	-1.3
3,183,624	+		Echvi_2677	0.28	-0.0
3,183,624	+		Echvi_2677	0.28	-0.4
3,183,625	-				+1.4
3,183,625	-		Echvi_2677	0.28	-0.2
3,183,625	-		Echvi_2677	0.28	-0.1
3,183,639	+		Echvi_2677	0.29	+0.6
3,183,640	-		Echvi_2677	0.29	+0.5
3,183,640	-		Echvi_2677	0.29	+0.1