Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1636

Experiment: m.b. nitrite 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 10 mM
1,891,303	-		Echvi_1635	0.72	-0.1
1,891,310	+		Echvi_1635	0.72	-1.8
1,891,317	+		Echvi_1635	0.72	-0.4
1,891,320	+		Echvi_1635	0.72	+0.1
1,891,320	+		Echvi_1635	0.72	-1.6
1,891,321	-		Echvi_1635	0.72	+0.5
1,891,322	+		Echvi_1635	0.72	+0.1
1,891,323	-		Echvi_1635	0.72	-0.0
1,891,331	+		Echvi_1635	0.73	+0.8
1,891,331	+		Echvi_1635	0.73	-0.8
1,891,332	-		Echvi_1635	0.73	+0.4
1,891,336	-		Echvi_1635	0.73	-1.1
1,891,336	-		Echvi_1635	0.73	-2.1
1,891,336	-		Echvi_1635	0.73	+0.8
1,891,379	+		Echvi_1635	0.74	+0.7
1,891,380	-		Echvi_1635	0.74	-1.2
1,891,380	-		Echvi_1635	0.74	+0.4
1,891,385	+		Echvi_1635	0.74	-0.8
1,891,385	+		Echvi_1635	0.74	+2.0
1,891,386	-		Echvi_1635	0.74	-0.5
1,891,386	-		Echvi_1635	0.74	-0.8
1,891,386	-		Echvi_1635	0.74	+0.1
1,891,386	-		Echvi_1635	0.74	+0.2
1,891,386	-		Echvi_1635	0.74	+0.3
1,891,448	+		Echvi_1635	0.76	-0.3
1,891,449	-		Echvi_1635	0.76	-0.3
1,891,514	-		Echvi_1635	0.78	-0.6
1,891,560	-		Echvi_1635	0.80	-0.7
1,891,584	+		Echvi_1635	0.80	+1.4
1,891,584	+		Echvi_1635	0.80	-1.2
1,891,584	+		Echvi_1635	0.80	+0.1
1,891,584	+		Echvi_1635	0.80	-1.3
1,891,585	-		Echvi_1635	0.80	-1.2
1,891,585	-		Echvi_1635	0.80	+0.0
1,891,590	+		Echvi_1635	0.81	-0.6
1,891,590	+		Echvi_1635	0.81	+1.0
1,891,591	-		Echvi_1635	0.81	-0.3
1,891,630	+		Echvi_1635	0.82	-1.9
1,891,631	-		Echvi_1635	0.82	-0.7
1,891,631	-		Echvi_1635	0.82	+0.8
1,891,663	-		Echvi_1635	0.83	-0.5
1,891,754	+		Echvi_1635	0.86	-1.9
1,891,772	+		Echvi_1635	0.86	-1.1
1,891,784	+		Echvi_1635	0.87	-0.2
1,891,785	-		Echvi_1635	0.87	-0.6
1,891,785	-		Echvi_1635	0.87	+0.3
1,891,789	-		Echvi_1635	0.87	-0.0
1,891,790	+		Echvi_1635	0.87	-0.2
1,891,841	-		Echvi_1635	0.88	-0.6
1,891,855	+		Echvi_1635	0.89	+0.9
1,891,855	+		Echvi_1635	0.89	+2.0
1,891,855	+		Echvi_1635	0.89	-2.2
1,891,856	-		Echvi_1635	0.89	-0.4
1,891,872	+		Echvi_1635	0.89	-1.2
1,891,872	+		Echvi_1635	0.89	+0.2
1,891,872	+		Echvi_1635	0.89	-1.5
1,891,872	+		Echvi_1635	0.89	+0.6
1,891,872	+		Echvi_1635	0.89	+0.7
1,891,872	+		Echvi_1635	0.89	+1.0
1,891,873	-		Echvi_1635	0.89	-0.5
1,891,914	-				+2.5
1,891,938	+				+1.4
1,891,939	-				-1.4
1,891,940	+				-0.3
1,891,941	-				-0.1
1,891,966	-				+1.0
1,891,966	-				-1.0
1,891,980	+				-1.9
1,892,028	-				-1.9
1,892,028	-				-1.0
1,892,047	+				-1.2
1,892,123	+				+0.1
1,892,124	-				+0.9
1,892,124	-				-1.2
1,892,125	+				+0.7
1,892,126	-				+0.2
1,892,126	-				-0.1
1,892,142	+				-0.4
1,892,259	+				+0.5
1,892,259	+				-0.9
1,892,259	+				-0.6
1,892,260	-				-0.8
1,892,266	-				+0.5
1,892,414	+				+0.1
1,892,415	-				-2.4
1,892,426	+				+1.5
1,892,441	+		Echvi_1636	0.11	+0.8
1,892,446	+		Echvi_1636	0.11	-1.3
1,892,459	-		Echvi_1636	0.12	+0.7
1,892,489	+		Echvi_1636	0.13	+0.5
1,892,490	-		Echvi_1636	0.13	-1.9
1,892,490	-		Echvi_1636	0.13	-0.5
1,892,490	-		Echvi_1636	0.13	-2.3
1,892,494	+		Echvi_1636	0.13	-2.2
1,892,498	+		Echvi_1636	0.14	+1.2
1,892,498	+		Echvi_1636	0.14	-0.9
1,892,499	-		Echvi_1636	0.14	-1.2
1,892,501	-		Echvi_1636	0.14	-0.5
1,892,536	-		Echvi_1636	0.16	-0.9
1,892,554	+		Echvi_1636	0.17	+0.5
1,892,554	+		Echvi_1636	0.17	+1.4
1,892,554	+		Echvi_1636	0.17	-0.6
1,892,554	+		Echvi_1636	0.17	-1.4
1,892,555	-		Echvi_1636	0.17	+1.5
1,892,555	-		Echvi_1636	0.17	-0.1
1,892,555	-		Echvi_1636	0.17	+0.5
1,892,555	-		Echvi_1636	0.17	+0.9
1,892,555	-		Echvi_1636	0.17	-1.0
1,892,555	-		Echvi_1636	0.17	-1.9
1,892,555	-		Echvi_1636	0.17	+1.0
1,892,555	-		Echvi_1636	0.17	-1.8
1,892,555	-		Echvi_1636	0.17	-0.8
1,892,555	-		Echvi_1636	0.17	+2.9
1,892,555	-		Echvi_1636	0.17	+0.4
1,892,558	+		Echvi_1636	0.17	-1.3
1,892,855	-		Echvi_1636	0.33	-0.3
1,892,876	+		Echvi_1636	0.34	-0.2
1,892,876	+		Echvi_1636	0.34	+0.4
1,892,877	-		Echvi_1636	0.34	-2.1
1,892,892	-		Echvi_1636	0.35	-0.2
1,892,981	-		Echvi_1636	0.39	+0.8
1,893,008	+		Echvi_1636	0.41	-1.7
1,893,016	+		Echvi_1636	0.41	-0.3
1,893,027	-		Echvi_1636	0.42	-0.9
1,893,027	-		Echvi_1636	0.42	-1.2
1,893,028	+		Echvi_1636	0.42	+0.3
1,893,028	+		Echvi_1636	0.42	-1.8
1,893,029	-		Echvi_1636	0.42	+0.7
1,893,029	-		Echvi_1636	0.42	+1.2
1,893,134	+		Echvi_1636	0.48	-2.0
1,893,285	-		Echvi_1636	0.56	-0.6
1,893,285	-		Echvi_1636	0.56	-2.2
1,893,308	-		Echvi_1636	0.57	-0.5
1,893,311	-		Echvi_1636	0.57	-2.2
1,893,437	+		Echvi_1636	0.64	-1.9
1,893,437	+		Echvi_1636	0.64	+0.3
1,893,438	-		Echvi_1636	0.64	-0.0
1,893,438	-		Echvi_1636	0.64	-1.0
1,893,438	-		Echvi_1636	0.64	+0.5
1,893,438	-		Echvi_1636	0.64	-1.5
1,893,439	+		Echvi_1636	0.64	-0.3
1,893,446	-		Echvi_1636	0.64	-0.1
1,893,460	+		Echvi_1636	0.65	-1.2
1,893,461	-		Echvi_1636	0.65	-0.5
1,893,527	+		Echvi_1636	0.69	-1.3
1,893,528	-		Echvi_1636	0.69	+1.2
1,893,605	+		Echvi_1636	0.73	-2.5
1,893,605	+		Echvi_1636	0.73	-2.9
1,893,605	+		Echvi_1636	0.73	-0.6
1,893,605	+		Echvi_1636	0.73	+0.0
1,893,606	-		Echvi_1636	0.73	-0.9
1,893,627	-		Echvi_1636	0.74	-0.2
1,893,627	-		Echvi_1636	0.74	-1.1
1,893,627	-		Echvi_1636	0.74	-0.0
1,893,634	+		Echvi_1636	0.74	-1.5
1,893,662	+		Echvi_1636	0.76	+0.2
1,893,662	+		Echvi_1636	0.76	-0.3
1,893,662	+		Echvi_1636	0.76	+0.8
1,893,663	-		Echvi_1636	0.76	+1.0
1,893,664	+		Echvi_1636	0.76	+1.6
1,893,664	+		Echvi_1636	0.76	+0.8
1,893,665	-		Echvi_1636	0.76	-0.8
1,893,665	-		Echvi_1636	0.76	-1.3
1,893,746	+		Echvi_1636	0.80	-1.0
1,893,763	+		Echvi_1636	0.81	-3.6
1,893,764	-		Echvi_1636	0.81	+0.8
1,893,795	+		Echvi_1636	0.83	+1.1
1,893,809	-		Echvi_1636	0.84	-0.9
1,893,834	-		Echvi_1636	0.85	-1.2
1,893,846	+		Echvi_1636	0.86	-1.3
1,893,847	-		Echvi_1636	0.86	+0.5
1,893,863	-		Echvi_1636	0.87	-0.0
1,893,973	+				+0.2
1,893,974	-				-0.7
1,893,974	-				-2.2
1,893,994	+				+0.3
1,894,009	+				-0.1
1,894,107	-				-2.6
1,894,109	+				+0.5
1,894,204	-				-1.4
1,894,246	-		Echvi_1637	0.19	-1.8
1,894,319	-		Echvi_1637	0.37	+0.2
1,894,362	-		Echvi_1637	0.48	-0.5
1,894,418	+		Echvi_1637	0.62	+1.0
1,894,418	+		Echvi_1637	0.62	-0.2
1,894,419	-		Echvi_1637	0.62	-0.3
1,894,419	-		Echvi_1637	0.62	-2.1
1,894,419	-		Echvi_1637	0.62	-0.9
1,894,419	-		Echvi_1637	0.62	+0.3
1,894,419	-		Echvi_1637	0.62	+0.5
1,894,419	-		Echvi_1637	0.62	+1.6
1,894,447	+		Echvi_1637	0.69	+0.2
1,894,447	+		Echvi_1637	0.69	+0.2
1,894,494	+		Echvi_1637	0.81	-0.0
1,894,570	+				-0.0
1,894,570	+				-1.9
1,894,571	-				-1.4
1,894,571	-				-0.1
1,894,624	-		Echvi_1638	0.18	-1.6
1,894,642	-		Echvi_1638	0.31	-0.5
1,894,668	+		Echvi_1638	0.48	+0.1
1,894,858	+				+0.4
1,894,921	-				-0.7
1,894,998	+		Echvi_1639	0.11	-0.3
1,894,999	-		Echvi_1639	0.11	-0.4
1,894,999	-		Echvi_1639	0.11	-0.1
1,894,999	-		Echvi_1639	0.11	-0.1
1,894,999	-		Echvi_1639	0.11	-1.7
1,895,062	+		Echvi_1639	0.15	-0.4
1,895,108	-		Echvi_1639	0.19	-0.0
1,895,108	-		Echvi_1639	0.19	+0.2
1,895,109	+		Echvi_1639	0.19	+0.3
1,895,110	-		Echvi_1639	0.19	+0.6