Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1130

Experiment: m.b. nitrite 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 10 mM
1,291,444	+		Echvi_1129	0.50	-1.2
1,291,444	+		Echvi_1129	0.50	+0.3
1,291,444	+		Echvi_1129	0.50	+1.0
1,291,446	+		Echvi_1129	0.50	+0.5
1,291,446	+		Echvi_1129	0.50	+1.6
1,291,447	-		Echvi_1129	0.51	+0.0
1,291,447	-		Echvi_1129	0.51	+1.0
1,291,473	+		Echvi_1129	0.52	+0.8
1,291,576	-		Echvi_1129	0.59	-0.0
1,291,608	-		Echvi_1129	0.61	-0.2
1,291,608	-		Echvi_1129	0.61	-0.3
1,291,730	+		Echvi_1129	0.68	+0.0
1,291,808	+		Echvi_1129	0.73	-0.8
1,291,838	-		Echvi_1129	0.75	+0.4
1,291,931	+		Echvi_1129	0.81	-1.0
1,291,932	-		Echvi_1129	0.81	-0.1
1,292,033	+		Echvi_1129	0.87	+1.1
1,292,033	+		Echvi_1129	0.87	+0.2
1,292,033	+		Echvi_1129	0.87	+0.5
1,292,034	-		Echvi_1129	0.87	+0.5
1,292,086	+				-2.6
1,292,128	+				-0.0
1,292,206	+				+0.1
1,292,206	+				+0.1
1,292,206	+				-0.9
1,292,206	+				-2.5
1,292,207	-				+0.1
1,292,207	-				-0.8
1,292,207	-				-1.4
1,292,207	-				+0.5
1,292,207	-				+0.4
1,292,209	-				+1.1
1,292,210	+				+0.5
1,292,210	+				+2.1
1,292,210	+				+0.5
1,292,211	-				-0.9
1,292,211	-				-0.4
1,292,211	-				-0.0
1,292,211	-				+0.9
1,292,214	+				-0.2
1,292,350	+				+0.4
1,292,350	+				-0.8
1,292,350	+				+0.8
1,292,351	-				-0.2
1,292,351	-				-0.7
1,292,351	-				+1.3
1,292,351	-				+1.1
1,292,351	-				-0.4
1,292,352	+				+0.4
1,292,353	-				+0.7
1,292,355	+				-1.9
1,292,356	-				-0.6
1,292,510	+		Echvi_1130	0.11	-0.5
1,292,510	+		Echvi_1130	0.11	+0.1
1,292,511	-		Echvi_1130	0.11	-0.1
1,292,511	-		Echvi_1130	0.11	-2.9
1,292,511	-		Echvi_1130	0.11	+0.0
1,292,578	-		Echvi_1130	0.16	-1.8
1,292,622	+		Echvi_1130	0.19	+0.7
1,292,645	+		Echvi_1130	0.21	+0.3
1,292,679	+		Echvi_1130	0.24	-0.7
1,292,679	+		Echvi_1130	0.24	-2.6
1,292,801	+		Echvi_1130	0.33	+0.4
1,292,801	+		Echvi_1130	0.33	-2.6
1,292,801	+		Echvi_1130	0.33	-0.0
1,292,801	+		Echvi_1130	0.33	-0.1
1,292,801	+		Echvi_1130	0.33	-0.2
1,292,852	+		Echvi_1130	0.37	-0.5
1,292,857	+		Echvi_1130	0.37	+0.3
1,292,946	-		Echvi_1130	0.44	+0.6
1,292,962	-		Echvi_1130	0.45	-1.8
1,292,965	+		Echvi_1130	0.45	+1.4
1,292,965	+		Echvi_1130	0.45	-0.7
1,292,965	+		Echvi_1130	0.45	-0.7
1,292,965	+		Echvi_1130	0.45	-1.5
1,292,981	-		Echvi_1130	0.46	-0.5
1,292,981	-		Echvi_1130	0.46	-0.9
1,292,981	-		Echvi_1130	0.46	+0.7
1,292,997	-		Echvi_1130	0.47	-3.0
1,293,029	+		Echvi_1130	0.50	+1.4
1,293,029	+		Echvi_1130	0.50	-2.7
1,293,029	+		Echvi_1130	0.50	-0.7
1,293,030	-		Echvi_1130	0.50	+1.3
1,293,033	-		Echvi_1130	0.50	-0.2
1,293,033	-		Echvi_1130	0.50	+0.3
1,293,033	-		Echvi_1130	0.50	+0.5
1,293,044	+		Echvi_1130	0.51	-1.4
1,293,045	-		Echvi_1130	0.51	-0.6
1,293,068	-		Echvi_1130	0.53	+0.2
1,293,073	+		Echvi_1130	0.53	+0.5
1,293,169	+		Echvi_1130	0.60	+1.6
1,293,221	+		Echvi_1130	0.64	-0.6
1,293,233	-		Echvi_1130	0.65	-0.6
1,293,233	-		Echvi_1130	0.65	-0.4
1,293,258	+		Echvi_1130	0.67	-0.0
1,293,258	+		Echvi_1130	0.67	+0.4
1,293,259	-		Echvi_1130	0.67	-0.1
1,293,259	-		Echvi_1130	0.67	-2.6
1,293,259	-		Echvi_1130	0.67	-0.9
1,293,259	-		Echvi_1130	0.67	-1.7
1,293,261	+		Echvi_1130	0.67	-0.4
1,293,262	-		Echvi_1130	0.67	-0.1
1,293,356	-		Echvi_1130	0.74	-2.8
1,293,361	-		Echvi_1130	0.75	-0.6
1,293,361	-		Echvi_1130	0.75	+1.6
1,293,410	-		Echvi_1130	0.78	+0.1
1,293,452	+		Echvi_1130	0.82	+0.3
1,293,453	-		Echvi_1130	0.82	-0.5
1,293,501	+		Echvi_1130	0.85	-1.0
1,293,502	-		Echvi_1130	0.85	+2.0
1,293,502	-		Echvi_1130	0.85	+0.0
1,293,515	-		Echvi_1130	0.86	+0.8
1,293,708	-				+0.3
1,293,711	+				-1.4
1,293,719	-				-0.5
1,293,719	-				-0.4
1,293,831	-				+0.7
1,293,849	+				+0.2
1,293,867	-				+0.6
1,293,892	+				+0.3
1,293,893	-				+1.2
1,293,896	-				+0.2
1,293,971	-				-0.4
1,293,974	-				+0.1
1,293,995	+				-0.5
1,293,996	-				-0.4
1,294,051	-				-0.3
1,294,051	-				+1.6
1,294,051	-				-0.4
1,294,137	+		Echvi_1131	0.10	-0.2
1,294,158	+		Echvi_1131	0.14	+0.2
1,294,267	+		Echvi_1131	0.30	+0.7
1,294,267	+		Echvi_1131	0.30	+0.5
1,294,268	-		Echvi_1131	0.30	-0.5
1,294,268	-		Echvi_1131	0.30	+0.2
1,294,282	-		Echvi_1131	0.32	+0.3
1,294,282	-		Echvi_1131	0.32	-0.5
1,294,292	+		Echvi_1131	0.33	-0.9
1,294,328	-		Echvi_1131	0.39	+0.6
1,294,386	+		Echvi_1131	0.47	-1.6
1,294,423	+		Echvi_1131	0.53	-0.1
1,294,424	-		Echvi_1131	0.53	-2.4
1,294,433	-		Echvi_1131	0.54	-1.6
1,294,459	+		Echvi_1131	0.58	+1.3
1,294,459	+		Echvi_1131	0.58	-0.1
1,294,460	-		Echvi_1131	0.58	+1.6
1,294,462	+		Echvi_1131	0.59	+1.4
1,294,462	+		Echvi_1131	0.59	+1.9
1,294,462	+		Echvi_1131	0.59	+1.2
1,294,490	-		Echvi_1131	0.63	-0.6
1,294,497	+		Echvi_1131	0.64	+0.5
1,294,497	+		Echvi_1131	0.64	-1.3
1,294,498	-		Echvi_1131	0.64	-0.3
1,294,518	-		Echvi_1131	0.67	-1.3
1,294,518	-		Echvi_1131	0.67	-0.3
1,294,523	+		Echvi_1131	0.68	-0.2
1,294,524	-		Echvi_1131	0.68	-0.8
1,294,524	-		Echvi_1131	0.68	+0.4
1,294,532	+		Echvi_1131	0.69	+2.6
1,294,532	+		Echvi_1131	0.69	-1.5
1,294,532	+		Echvi_1131	0.69	+1.5
1,294,532	+		Echvi_1131	0.69	-2.3
1,294,533	-		Echvi_1131	0.69	+2.6
1,294,537	+		Echvi_1131	0.70	+0.3
1,294,538	-		Echvi_1131	0.70	+0.6
1,294,538	-		Echvi_1131	0.70	-0.2
1,294,538	-		Echvi_1131	0.70	+0.0
1,294,538	-		Echvi_1131	0.70	-0.7
1,294,538	-		Echvi_1131	0.70	-0.5
1,294,538	-		Echvi_1131	0.70	-0.0
1,294,538	-		Echvi_1131	0.70	+0.3
1,294,542	+		Echvi_1131	0.71	-0.5
1,294,546	-		Echvi_1131	0.71	-0.1
1,294,555	+		Echvi_1131	0.73	+1.0
1,294,589	-		Echvi_1131	0.78	+0.6