Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0941

Experiment: m.b. nitrite 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 10 mM
1,085,745	+		Echvi_0940	0.31	+0.5
1,085,745	+		Echvi_0940	0.31	-1.0
1,085,745	+		Echvi_0940	0.31	+0.5
1,085,746	-		Echvi_0940	0.32	+1.0
1,085,746	-		Echvi_0940	0.32	+0.0
1,085,746	-		Echvi_0940	0.32	-1.1
1,085,746	-		Echvi_0940	0.32	-0.1
1,085,808	+		Echvi_0940	0.37	-0.7
1,085,809	-		Echvi_0940	0.37	-0.0
1,085,822	+		Echvi_0940	0.38	+0.6
1,085,823	-		Echvi_0940	0.38	-0.0
1,085,823	-		Echvi_0940	0.38	-1.9
1,085,823	-		Echvi_0940	0.38	+0.0
1,085,842	+		Echvi_0940	0.40	+1.0
1,085,916	+		Echvi_0940	0.47	+0.4
1,085,917	-		Echvi_0940	0.47	-0.3
1,085,919	+		Echvi_0940	0.47	-1.9
1,085,919	+		Echvi_0940	0.47	+0.2
1,085,919	+		Echvi_0940	0.47	+0.4
1,085,920	-		Echvi_0940	0.47	+0.1
1,086,105	+		Echvi_0940	0.64	+0.2
1,086,105	+		Echvi_0940	0.64	+0.5
1,086,106	-		Echvi_0940	0.64	-0.7
1,086,106	-		Echvi_0940	0.64	+0.3
1,086,176	-		Echvi_0940	0.70	+0.1
1,086,176	-		Echvi_0940	0.70	+0.9
1,086,293	-		Echvi_0940	0.80	+0.9
1,086,319	+		Echvi_0940	0.83	+1.2
1,086,320	-		Echvi_0940	0.83	+0.9
1,086,320	-		Echvi_0940	0.83	-0.6
1,086,320	-		Echvi_0940	0.83	+1.1
1,086,321	+		Echvi_0940	0.83	-1.9
1,086,321	+		Echvi_0940	0.83	+1.5
1,086,321	+		Echvi_0940	0.83	+0.5
1,086,322	-		Echvi_0940	0.83	+0.3
1,086,341	+		Echvi_0940	0.85	+1.3
1,086,381	+		Echvi_0940	0.88	+0.6
1,086,439	+				+1.5
1,086,440	-				+0.5
1,086,453	+				-0.2
1,086,453	+				+0.9
1,086,454	-				+1.4
1,086,454	-				+0.1
1,086,459	+				-1.6
1,086,459	+				-0.0
1,086,459	+				-0.2
1,086,459	+				+0.5
1,086,459	+				-0.0
1,086,459	+				+1.0
1,086,459	+				+1.0
1,086,459	+				+0.7
1,086,460	-				+0.7
1,086,460	-				+0.6
1,086,460	-				-0.3
1,086,550	+				+0.4
1,086,550	+				+1.4
1,086,550	+				-0.2
1,086,550	+				-1.1
1,086,551	-				-0.4
1,086,551	-				+0.1
1,086,552	+				+0.6
1,086,552	+				-0.5
1,086,553	-				+0.6
1,086,579	-				-0.7
1,086,583	+				-1.4
1,086,601	+				-0.7
1,086,601	+				-1.7
1,086,602	-				+0.7
1,086,621	+				-0.5
1,086,665	+				-0.0
1,086,666	-				-1.0
1,086,694	+				-0.1
1,086,694	+				-0.1
1,086,730	+				+0.4
1,086,730	+				+1.1
1,086,731	-				+1.9
1,086,731	-				-1.7
1,086,731	-				-2.0
1,086,743	+				-0.5
1,086,765	+				-0.2
1,086,765	+				-0.2
1,086,766	-				+1.0
1,086,766	-				-0.7
1,086,766	-				-0.7
1,086,898	-		Echvi_0941	0.16	-0.7
1,086,898	-		Echvi_0941	0.16	-0.8
1,087,024	+		Echvi_0941	0.27	-1.5
1,087,024	+		Echvi_0941	0.27	-0.2
1,087,024	+		Echvi_0941	0.27	+1.3
1,087,024	+		Echvi_0941	0.27	-1.6
1,087,057	+		Echvi_0941	0.30	-0.5
1,087,058	-		Echvi_0941	0.30	+0.1
1,087,063	+		Echvi_0941	0.30	+0.7
1,087,064	-		Echvi_0941	0.31	-0.1
1,087,064	-		Echvi_0941	0.31	+0.1
1,087,131	+		Echvi_0941	0.36	-0.0
1,087,132	-		Echvi_0941	0.36	-1.2
1,087,132	-		Echvi_0941	0.36	+1.4
1,087,137	+		Echvi_0941	0.37	+0.5
1,087,138	-		Echvi_0941	0.37	-0.3
1,087,138	-		Echvi_0941	0.37	+0.5
1,087,138	-		Echvi_0941	0.37	-1.9
1,087,163	+		Echvi_0941	0.39	+0.1
1,087,164	-		Echvi_0941	0.39	-0.7
1,087,282	+		Echvi_0941	0.49	+0.3
1,087,282	+		Echvi_0941	0.49	-0.2
1,087,283	-		Echvi_0941	0.49	-0.4
1,087,311	+		Echvi_0941	0.52	+0.6
1,087,351	-		Echvi_0941	0.55	-1.3
1,087,351	-		Echvi_0941	0.55	+0.3
1,087,366	+		Echvi_0941	0.56	+2.2
1,087,366	+		Echvi_0941	0.56	-1.2
1,087,366	+		Echvi_0941	0.56	+0.4
1,087,367	-		Echvi_0941	0.56	+0.4
1,087,368	+		Echvi_0941	0.56	+0.6
1,087,368	+		Echvi_0941	0.56	+0.1
1,087,368	+		Echvi_0941	0.56	+1.0
1,087,368	+		Echvi_0941	0.56	+0.1
1,087,368	+		Echvi_0941	0.56	+1.4
1,087,368	+		Echvi_0941	0.56	+0.4
1,087,368	+		Echvi_0941	0.56	+0.1
1,087,369	-		Echvi_0941	0.57	+0.3
1,087,369	-		Echvi_0941	0.57	-0.6
1,087,369	-		Echvi_0941	0.57	+1.3
1,087,369	-		Echvi_0941	0.57	+0.8
1,087,400	+		Echvi_0941	0.59	-0.1
1,087,435	+		Echvi_0941	0.62	+0.6
1,087,437	+		Echvi_0941	0.62	-0.2
1,087,437	+		Echvi_0941	0.62	+1.8
1,087,437	+		Echvi_0941	0.62	-0.5
1,087,437	+		Echvi_0941	0.62	+0.3
1,087,438	-		Echvi_0941	0.62	-1.3
1,087,438	-		Echvi_0941	0.62	+0.2
1,087,438	-		Echvi_0941	0.62	+1.0
1,087,438	-		Echvi_0941	0.62	+0.3
1,087,438	-		Echvi_0941	0.62	-1.6
1,087,447	-		Echvi_0941	0.63	+1.5
1,087,447	-		Echvi_0941	0.63	+0.7
1,087,484	+		Echvi_0941	0.66	+0.0
1,087,484	+		Echvi_0941	0.66	-0.7
1,087,486	+		Echvi_0941	0.67	-1.0
1,087,487	-		Echvi_0941	0.67	-0.5
1,087,496	+		Echvi_0941	0.67	+0.8
1,087,496	+		Echvi_0941	0.67	-0.9
1,087,496	+		Echvi_0941	0.67	-0.2
1,087,496	+		Echvi_0941	0.67	-0.6
1,087,497	-		Echvi_0941	0.68	+0.1
1,087,497	-		Echvi_0941	0.68	+0.6
1,087,497	-		Echvi_0941	0.68	-0.7
1,087,497	-		Echvi_0941	0.68	-2.1
1,087,497	-		Echvi_0941	0.68	-0.2
1,087,497	-		Echvi_0941	0.68	-0.0
1,087,497	-		Echvi_0941	0.68	-0.3
1,087,507	+		Echvi_0941	0.68	-1.0
1,087,508	-		Echvi_0941	0.68	-0.7
1,087,545	-		Echvi_0941	0.72	-0.1
1,087,545	-		Echvi_0941	0.72	-0.2
1,087,569	+		Echvi_0941	0.74	+2.2
1,087,570	-		Echvi_0941	0.74	-1.4
1,087,580	+		Echvi_0941	0.75	-1.5
1,087,581	-		Echvi_0941	0.75	+0.6
1,087,627	-		Echvi_0941	0.79	+0.7
1,087,627	-		Echvi_0941	0.79	-0.5
1,087,627	-		Echvi_0941	0.79	-0.0
1,087,627	-		Echvi_0941	0.79	+0.2
1,087,627	-		Echvi_0941	0.79	+0.2
1,087,638	-		Echvi_0941	0.80	-0.4
1,087,668	+		Echvi_0941	0.82	-0.0
1,087,668	+		Echvi_0941	0.82	+0.4
1,087,668	+		Echvi_0941	0.82	+0.9
1,087,669	-		Echvi_0941	0.82	-0.9
1,087,669	-		Echvi_0941	0.82	+1.3
1,087,681	+		Echvi_0941	0.83	+1.4
1,087,681	+		Echvi_0941	0.83	+1.0
1,087,681	+		Echvi_0941	0.83	-0.3
1,087,682	-		Echvi_0941	0.83	-1.3
1,087,729	+		Echvi_0941	0.87	+0.5
1,087,729	+		Echvi_0941	0.87	-0.1
1,087,729	+		Echvi_0941	0.87	+0.6
1,087,729	+		Echvi_0941	0.87	-1.5
1,087,730	-		Echvi_0941	0.87	+0.1
1,087,736	+		Echvi_0941	0.88	-0.4
1,087,736	+		Echvi_0941	0.88	-0.0
1,087,736	+		Echvi_0941	0.88	-0.1
1,087,737	-		Echvi_0941	0.88	+0.4
1,087,788	-				-2.0
1,087,788	-				+0.9
1,087,788	-				-0.5
1,087,797	-				+0.5
1,087,816	+				+0.5
1,087,816	+				+1.0
1,087,816	+				+1.7
1,087,816	+				-2.2
1,087,816	+				+0.0
1,087,816	+				-1.0
1,087,816	+				+0.1
1,087,816	+				-0.4
1,087,816	+				-0.3
1,087,817	-				-0.4
1,087,827	+				+0.6
1,087,827	+				+0.2
1,087,848	-				-1.1
1,087,886	+				+1.9
1,087,887	-				-1.3
1,087,887	-				+0.1
1,087,887	-				-0.0
1,087,911	-				-0.7
1,087,935	-				-2.4
1,087,942	-		Echvi_0942	0.10	+0.6
1,088,036	+		Echvi_0942	0.23	+0.8
1,088,037	-		Echvi_0942	0.23	-0.2
1,088,062	-		Echvi_0942	0.26	+0.2
1,088,062	-		Echvi_0942	0.26	+1.4
1,088,124	-		Echvi_0942	0.35	-0.2
1,088,144	+		Echvi_0942	0.38	-0.0
1,088,144	+		Echvi_0942	0.38	+0.5
1,088,185	+		Echvi_0942	0.43	-1.0
1,088,185	+		Echvi_0942	0.43	+0.2
1,088,186	-		Echvi_0942	0.43	-0.9
1,088,203	+		Echvi_0942	0.45	-1.5
1,088,203	+		Echvi_0942	0.45	+0.2
1,088,203	+		Echvi_0942	0.45	+0.4
1,088,204	-		Echvi_0942	0.46	+0.1
1,088,204	-		Echvi_0942	0.46	+2.5
1,088,204	-		Echvi_0942	0.46	+0.3
1,088,204	-		Echvi_0942	0.46	+1.2
1,088,204	-		Echvi_0942	0.46	-0.4
1,088,209	+		Echvi_0942	0.46	-0.3
1,088,210	-		Echvi_0942	0.46	+0.2
1,088,210	-		Echvi_0942	0.46	-0.8
1,088,242	-		Echvi_0942	0.51	+0.8
1,088,276	+		Echvi_0942	0.55	-0.1
1,088,293	+		Echvi_0942	0.58	+0.5
1,088,293	+		Echvi_0942	0.58	-1.6
1,088,294	-		Echvi_0942	0.58	-1.5
1,088,322	+		Echvi_0942	0.62	-2.2
1,088,322	+		Echvi_0942	0.62	-0.6
1,088,322	+				+3.0
1,088,323	-		Echvi_0942	0.62	+1.6
1,088,323	-		Echvi_0942	0.62	+0.5
1,088,396	-		Echvi_0942	0.72	-0.6
1,088,433	+		Echvi_0942	0.77	-2.3
1,088,434	-		Echvi_0942	0.77	+1.5
1,088,453	+		Echvi_0942	0.79	+0.3
1,088,453	+		Echvi_0942	0.79	+0.4
1,088,453	+		Echvi_0942	0.79	+0.8
1,088,453	+		Echvi_0942	0.79	-3.5
1,088,480	+		Echvi_0942	0.83	+0.6
1,088,483	+		Echvi_0942	0.83	-0.4
1,088,498	+		Echvi_0942	0.85	-0.2
1,088,498	+		Echvi_0942	0.85	+0.3
1,088,499	-		Echvi_0942	0.85	+0.6
1,088,505	+		Echvi_0942	0.86	-0.2
1,088,523	+		Echvi_0942	0.89	+0.1
1,088,523	+		Echvi_0942	0.89	+0.3
1,088,524	-		Echvi_0942	0.89	+0.7
1,088,563	-				-1.1
1,088,563	-				+0.5
1,088,577	-				+0.7
1,088,580	-				-0.0
1,088,580	-				-0.5
1,088,580	-				-0.9
1,088,619	+				+0.8
1,088,642	+				-0.1
1,088,643	-				-1.4
1,088,652	-				+0.1
1,088,652	-				-0.7
1,088,661	-				+1.3
1,088,661	-				-1.2
1,088,689	+				+1.3
1,088,689	+				+0.6
1,088,689	+				-0.5
1,088,690	-				-0.0
1,088,690	-				-1.2
1,088,710	-				-0.2
1,088,781	+		Echvi_0943	0.19	+1.0
1,088,781	+		Echvi_0943	0.19	+0.6
1,088,781	+		Echvi_0943	0.19	-0.6
1,088,822	+		Echvi_0943	0.33	-0.6