Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0940

Experiment: m.b. nitrite 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 10 mM
1,084,402	+		Echvi_0939	0.23	+1.0
1,084,403	-		Echvi_0939	0.23	-0.8
1,084,591	-		Echvi_0939	0.38	-1.7
1,084,662	-		Echvi_0939	0.44	+0.6
1,084,662	-		Echvi_0939	0.44	-0.6
1,084,693	-		Echvi_0939	0.47	+0.4
1,084,784	-		Echvi_0939	0.54	+0.5
1,084,889	+		Echvi_0939	0.63	-0.5
1,084,889	+		Echvi_0939	0.63	-0.0
1,084,890	-		Echvi_0939	0.63	-2.5
1,084,924	+		Echvi_0939	0.66	-1.7
1,084,924	+		Echvi_0939	0.66	-0.4
1,084,925	-		Echvi_0939	0.66	-0.0
1,084,976	+		Echvi_0939	0.70	-1.2
1,084,976	+		Echvi_0939	0.70	-1.1
1,085,035	+		Echvi_0939	0.75	-0.4
1,085,036	-		Echvi_0939	0.75	+0.4
1,085,043	+		Echvi_0939	0.76	-1.3
1,085,122	+		Echvi_0939	0.83	+2.2
1,085,124	+		Echvi_0939	0.83	-0.0
1,085,125	-		Echvi_0939	0.83	-1.2
1,085,205	+		Echvi_0939	0.89	-2.0
1,085,210	-		Echvi_0939	0.90	-0.3
1,085,210	-		Echvi_0939	0.90	-0.1
1,085,210	-		Echvi_0939	0.90	-1.0
1,085,210	-		Echvi_0939	0.90	+0.4
1,085,329	+				+0.8
1,085,329	+				+0.1
1,085,330	-				-0.2
1,085,358	+				-0.7
1,085,370	+				+0.0
1,085,370	+				+2.6
1,085,370	+				-1.3
1,085,371	-				-1.0
1,085,381	+				+0.5
1,085,382	-				+1.0
1,085,382	-				+1.6
1,085,388	+				-0.0
1,085,395	-				-0.4
1,085,395	-				+0.5
1,085,413	+				+0.3
1,085,427	+				+0.7
1,085,454	+				-0.4
1,085,542	+		Echvi_0940	0.13	-2.8
1,085,542	+		Echvi_0940	0.13	-0.2
1,085,552	-		Echvi_0940	0.14	+0.1
1,085,603	-		Echvi_0940	0.19	+0.9
1,085,638	-		Echvi_0940	0.22	+0.0
1,085,638	-		Echvi_0940	0.22	+0.0
1,085,676	+		Echvi_0940	0.25	+0.1
1,085,677	-		Echvi_0940	0.25	+0.3
1,085,677	-		Echvi_0940	0.25	-1.1
1,085,694	+		Echvi_0940	0.27	-0.6
1,085,745	+		Echvi_0940	0.31	+0.5
1,085,745	+		Echvi_0940	0.31	-1.0
1,085,745	+		Echvi_0940	0.31	+0.5
1,085,746	-		Echvi_0940	0.32	+1.0
1,085,746	-		Echvi_0940	0.32	+0.0
1,085,746	-		Echvi_0940	0.32	-1.1
1,085,746	-		Echvi_0940	0.32	-0.1
1,085,808	+		Echvi_0940	0.37	-0.7
1,085,809	-		Echvi_0940	0.37	-0.0
1,085,822	+		Echvi_0940	0.38	+0.6
1,085,823	-		Echvi_0940	0.38	-0.0
1,085,823	-		Echvi_0940	0.38	-1.9
1,085,823	-		Echvi_0940	0.38	+0.0
1,085,842	+		Echvi_0940	0.40	+1.0
1,085,916	+		Echvi_0940	0.47	+0.4
1,085,917	-		Echvi_0940	0.47	-0.3
1,085,919	+		Echvi_0940	0.47	-1.9
1,085,919	+		Echvi_0940	0.47	+0.2
1,085,919	+		Echvi_0940	0.47	+0.4
1,085,920	-		Echvi_0940	0.47	+0.1
1,086,105	+		Echvi_0940	0.64	+0.2
1,086,105	+		Echvi_0940	0.64	+0.5
1,086,106	-		Echvi_0940	0.64	-0.7
1,086,106	-		Echvi_0940	0.64	+0.3
1,086,176	-		Echvi_0940	0.70	+0.1
1,086,176	-		Echvi_0940	0.70	+0.9
1,086,293	-		Echvi_0940	0.80	+0.9
1,086,319	+		Echvi_0940	0.83	+1.2
1,086,320	-		Echvi_0940	0.83	+0.9
1,086,320	-		Echvi_0940	0.83	-0.6
1,086,320	-		Echvi_0940	0.83	+1.1
1,086,321	+		Echvi_0940	0.83	-1.9
1,086,321	+		Echvi_0940	0.83	+1.5
1,086,321	+		Echvi_0940	0.83	+0.5
1,086,322	-		Echvi_0940	0.83	+0.3
1,086,341	+		Echvi_0940	0.85	+1.3
1,086,381	+		Echvi_0940	0.88	+0.6
1,086,439	+				+1.5
1,086,440	-				+0.5
1,086,453	+				-0.2
1,086,453	+				+0.9
1,086,454	-				+1.4
1,086,454	-				+0.1
1,086,459	+				-1.6
1,086,459	+				-0.0
1,086,459	+				-0.2
1,086,459	+				+0.5
1,086,459	+				-0.0
1,086,459	+				+1.0
1,086,459	+				+1.0
1,086,459	+				+0.7
1,086,460	-				+0.7
1,086,460	-				+0.6
1,086,460	-				-0.3
1,086,550	+				+0.4
1,086,550	+				+1.4
1,086,550	+				-0.2
1,086,550	+				-1.1
1,086,551	-				-0.4
1,086,551	-				+0.1
1,086,552	+				+0.6
1,086,552	+				-0.5
1,086,553	-				+0.6
1,086,579	-				-0.7
1,086,583	+				-1.4
1,086,601	+				-0.7
1,086,601	+				-1.7
1,086,602	-				+0.7
1,086,621	+				-0.5
1,086,665	+				-0.0
1,086,666	-				-1.0
1,086,694	+				-0.1
1,086,694	+				-0.1
1,086,730	+				+0.4
1,086,730	+				+1.1
1,086,731	-				+1.9
1,086,731	-				-1.7
1,086,731	-				-2.0
1,086,743	+				-0.5
1,086,765	+				-0.2
1,086,765	+				-0.2
1,086,766	-				+1.0
1,086,766	-				-0.7
1,086,766	-				-0.7
1,086,898	-		Echvi_0941	0.16	-0.7
1,086,898	-		Echvi_0941	0.16	-0.8
1,087,024	+		Echvi_0941	0.27	-1.5
1,087,024	+		Echvi_0941	0.27	-0.2
1,087,024	+		Echvi_0941	0.27	+1.3
1,087,024	+		Echvi_0941	0.27	-1.6
1,087,057	+		Echvi_0941	0.30	-0.5
1,087,058	-		Echvi_0941	0.30	+0.1
1,087,063	+		Echvi_0941	0.30	+0.7
1,087,064	-		Echvi_0941	0.31	-0.1
1,087,064	-		Echvi_0941	0.31	+0.1
1,087,131	+		Echvi_0941	0.36	-0.0
1,087,132	-		Echvi_0941	0.36	-1.2
1,087,132	-		Echvi_0941	0.36	+1.4
1,087,137	+		Echvi_0941	0.37	+0.5
1,087,138	-		Echvi_0941	0.37	-0.3
1,087,138	-		Echvi_0941	0.37	+0.5
1,087,138	-		Echvi_0941	0.37	-1.9
1,087,163	+		Echvi_0941	0.39	+0.1
1,087,164	-		Echvi_0941	0.39	-0.7
1,087,282	+		Echvi_0941	0.49	+0.3
1,087,282	+		Echvi_0941	0.49	-0.2
1,087,283	-		Echvi_0941	0.49	-0.4
1,087,311	+		Echvi_0941	0.52	+0.6
1,087,351	-		Echvi_0941	0.55	-1.3
1,087,351	-		Echvi_0941	0.55	+0.3
1,087,366	+		Echvi_0941	0.56	+2.2
1,087,366	+		Echvi_0941	0.56	-1.2
1,087,366	+		Echvi_0941	0.56	+0.4
1,087,367	-		Echvi_0941	0.56	+0.4
1,087,368	+		Echvi_0941	0.56	+0.6
1,087,368	+		Echvi_0941	0.56	+0.1
1,087,368	+		Echvi_0941	0.56	+1.0
1,087,368	+		Echvi_0941	0.56	+0.1
1,087,368	+		Echvi_0941	0.56	+1.4
1,087,368	+		Echvi_0941	0.56	+0.4
1,087,368	+		Echvi_0941	0.56	+0.1
1,087,369	-		Echvi_0941	0.57	+0.3
1,087,369	-		Echvi_0941	0.57	-0.6
1,087,369	-		Echvi_0941	0.57	+1.3
1,087,369	-		Echvi_0941	0.57	+0.8
1,087,400	+		Echvi_0941	0.59	-0.1
1,087,435	+		Echvi_0941	0.62	+0.6
1,087,437	+		Echvi_0941	0.62	-0.2
1,087,437	+		Echvi_0941	0.62	+1.8
1,087,437	+		Echvi_0941	0.62	-0.5
1,087,437	+		Echvi_0941	0.62	+0.3
1,087,438	-		Echvi_0941	0.62	-1.3
1,087,438	-		Echvi_0941	0.62	+0.2
1,087,438	-		Echvi_0941	0.62	+1.0
1,087,438	-		Echvi_0941	0.62	+0.3
1,087,438	-		Echvi_0941	0.62	-1.6
1,087,447	-		Echvi_0941	0.63	+1.5
1,087,447	-		Echvi_0941	0.63	+0.7
1,087,484	+		Echvi_0941	0.66	+0.0
1,087,484	+		Echvi_0941	0.66	-0.7
1,087,486	+		Echvi_0941	0.67	-1.0
1,087,487	-		Echvi_0941	0.67	-0.5
1,087,496	+		Echvi_0941	0.67	+0.8
1,087,496	+		Echvi_0941	0.67	-0.9
1,087,496	+		Echvi_0941	0.67	-0.2
1,087,496	+		Echvi_0941	0.67	-0.6
1,087,497	-		Echvi_0941	0.68	+0.1
1,087,497	-		Echvi_0941	0.68	+0.6
1,087,497	-		Echvi_0941	0.68	-0.7
1,087,497	-		Echvi_0941	0.68	-2.1
1,087,497	-		Echvi_0941	0.68	-0.2
1,087,497	-		Echvi_0941	0.68	-0.0
1,087,497	-		Echvi_0941	0.68	-0.3
1,087,507	+		Echvi_0941	0.68	-1.0
1,087,508	-		Echvi_0941	0.68	-0.7