Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_21515 and CA264_21520 are separated by 39 nucleotides CA264_21520 and CA264_21525 are separated by 156 nucleotides CA264_21525 and CA264_21530 are separated by 156 nucleotides CA264_21530 and CA264_21535 are separated by 239 nucleotides
CA264_21515: CA264_21515 - MATE family efflux transporter, at 173,267 to 174,706
_21515
CA264_21520: CA264_21520 - hypothetical protein, at 174,746 to 175,450
_21520
CA264_21525: CA264_21525 - DUF305 domain-containing protein, at 175,607 to 176,320
_21525
CA264_21530: CA264_21530 - four-helix bundle copper-binding protein, at 176,477 to 176,794
_21530
CA264_21535: CA264_21535 - hypothetical protein, at 177,034 to 177,399
_21535
Position (kb)
175
176
177 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 174.612 kb on - strand at 174.614 kb on + strand at 174.653 kb on - strand at 174.683 kb on + strand at 174.686 kb on + strand at 174.686 kb on + strand at 174.686 kb on + strand at 174.713 kb on + strand at 174.714 kb on - strand at 174.714 kb on - strand at 174.714 kb on - strand at 174.714 kb on - strand at 174.726 kb on - strand at 174.801 kb on + strand at 174.801 kb on + strand at 174.802 kb on - strand at 174.811 kb on + strand at 174.813 kb on + strand at 174.813 kb on + strand at 174.814 kb on - strand at 174.815 kb on + strand at 174.815 kb on + strand at 174.815 kb on + strand at 174.869 kb on - strand, within CA264_21520 at 174.925 kb on - strand, within CA264_21520 at 174.935 kb on - strand, within CA264_21520 at 174.949 kb on + strand, within CA264_21520 at 174.984 kb on - strand, within CA264_21520 at 174.998 kb on + strand, within CA264_21520 at 174.999 kb on - strand, within CA264_21520 at 174.999 kb on - strand, within CA264_21520 at 175.104 kb on + strand, within CA264_21520 at 175.182 kb on - strand, within CA264_21520 at 175.183 kb on + strand, within CA264_21520 at 175.184 kb on - strand, within CA264_21520 at 175.184 kb on - strand, within CA264_21520 at 175.191 kb on + strand, within CA264_21520 at 175.300 kb on + strand, within CA264_21520 at 175.322 kb on + strand, within CA264_21520 at 175.322 kb on + strand, within CA264_21520 at 175.384 kb on + strand at 175.384 kb on + strand at 175.385 kb on - strand at 175.385 kb on - strand at 175.385 kb on - strand at 175.420 kb on - strand at 175.420 kb on - strand at 175.441 kb on + strand at 175.450 kb on + strand at 175.467 kb on - strand at 175.469 kb on + strand at 175.470 kb on - strand at 175.470 kb on - strand at 175.471 kb on + strand at 175.471 kb on + strand at 175.471 kb on + strand at 175.471 kb on + strand at 175.471 kb on + strand at 175.540 kb on - strand at 175.583 kb on + strand at 175.609 kb on - strand at 175.668 kb on - strand at 175.691 kb on + strand, within CA264_21525 at 175.692 kb on - strand, within CA264_21525 at 175.819 kb on + strand, within CA264_21525 at 175.820 kb on - strand, within CA264_21525 at 175.880 kb on - strand, within CA264_21525 at 175.888 kb on + strand, within CA264_21525 at 175.919 kb on - strand, within CA264_21525 at 175.944 kb on - strand, within CA264_21525 at 176.017 kb on - strand, within CA264_21525 at 176.042 kb on + strand, within CA264_21525 at 176.220 kb on - strand, within CA264_21525 at 176.228 kb on - strand, within CA264_21525 at 176.328 kb on - strand at 176.457 kb on + strand at 176.469 kb on + strand at 176.469 kb on + strand at 176.472 kb on - strand at 176.603 kb on + strand, within CA264_21530 at 176.606 kb on + strand, within CA264_21530 at 176.636 kb on + strand, within CA264_21530 at 176.636 kb on + strand, within CA264_21530 at 176.636 kb on + strand, within CA264_21530 at 176.640 kb on + strand, within CA264_21530 at 176.641 kb on - strand, within CA264_21530 at 176.662 kb on + strand, within CA264_21530 at 176.663 kb on - strand, within CA264_21530 at 176.742 kb on + strand, within CA264_21530 at 176.773 kb on + strand at 176.774 kb on - strand at 176.777 kb on + strand at 176.777 kb on + strand at 176.778 kb on - strand at 176.778 kb on - strand at 176.799 kb on - strand at 176.810 kb on - strand at 176.831 kb on - strand at 176.831 kb on - strand at 176.831 kb on - strand at 176.831 kb on - strand at 176.831 kb on - strand at 176.860 kb on - strand at 176.860 kb on - strand at 176.880 kb on + strand at 176.881 kb on - strand at 176.883 kb on + strand at 176.892 kb on + strand at 176.948 kb on + strand at 176.948 kb on + strand at 176.949 kb on - strand at 176.953 kb on + strand at 176.970 kb on - strand at 177.037 kb on + strand at 177.037 kb on + strand at 177.038 kb on - strand at 177.038 kb on - strand at 177.055 kb on + strand at 177.075 kb on + strand, within CA264_21535 at 177.095 kb on + strand, within CA264_21535 at 177.099 kb on + strand, within CA264_21535 at 177.099 kb on + strand, within CA264_21535 at 177.099 kb on + strand, within CA264_21535 at 177.142 kb on - strand, within CA264_21535 at 177.150 kb on - strand, within CA264_21535 at 177.183 kb on + strand, within CA264_21535 at 177.212 kb on + strand, within CA264_21535 at 177.234 kb on + strand, within CA264_21535 at 177.234 kb on + strand, within CA264_21535 at 177.235 kb on - strand, within CA264_21535 at 177.236 kb on + strand, within CA264_21535 at 177.236 kb on + strand, within CA264_21535 at 177.236 kb on + strand, within CA264_21535 at 177.240 kb on + strand, within CA264_21535 at 177.241 kb on - strand, within CA264_21535
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 174,612 - -0.7 174,614 + +1.9 174,653 - +0.3 174,683 + -0.3 174,686 + +1.8 174,686 + +0.3 174,686 + +0.6 174,713 + +0.3 174,714 - +0.4 174,714 - -1.4 174,714 - +0.9 174,714 - +0.3 174,726 - -0.0 174,801 + -0.7 174,801 + -2.2 174,802 - -1.1 174,811 + -0.4 174,813 + -0.1 174,813 + -1.1 174,814 - +1.5 174,815 + -0.1 174,815 + -0.5 174,815 + +0.2 174,869 - CA264_21520 0.17 +0.7 174,925 - CA264_21520 0.25 -0.3 174,935 - CA264_21520 0.27 -0.3 174,949 + CA264_21520 0.29 +1.3 174,984 - CA264_21520 0.34 +0.3 174,998 + CA264_21520 0.36 -1.6 174,999 - CA264_21520 0.36 +0.4 174,999 - CA264_21520 0.36 -0.1 175,104 + CA264_21520 0.51 +0.2 175,182 - CA264_21520 0.62 -0.5 175,183 + CA264_21520 0.62 -0.3 175,184 - CA264_21520 0.62 +1.1 175,184 - CA264_21520 0.62 +0.0 175,191 + CA264_21520 0.63 -0.6 175,300 + CA264_21520 0.79 +0.5 175,322 + CA264_21520 0.82 +0.4 175,322 + CA264_21520 0.82 -0.2 175,384 + -1.8 175,384 + -3.1 175,385 - +0.7 175,385 - -0.7 175,385 - -0.3 175,420 - +0.1 175,420 - -0.9 175,441 + -1.1 175,450 + -0.3 175,467 - -1.6 175,469 + +0.0 175,470 - -0.9 175,470 - -0.3 175,471 + -0.3 175,471 + -0.4 175,471 + -0.6 175,471 + +0.2 175,471 + +0.5 175,540 - +0.7 175,583 + +0.1 175,609 - +0.0 175,668 - -0.2 175,691 + CA264_21525 0.12 -0.0 175,692 - CA264_21525 0.12 -0.3 175,819 + CA264_21525 0.30 +0.5 175,820 - CA264_21525 0.30 -1.1 175,880 - CA264_21525 0.38 -0.3 175,888 + CA264_21525 0.39 -0.1 175,919 - CA264_21525 0.44 -0.2 175,944 - CA264_21525 0.47 -0.6 176,017 - CA264_21525 0.57 +0.1 176,042 + CA264_21525 0.61 -0.9 176,220 - CA264_21525 0.86 -1.5 176,228 - CA264_21525 0.87 -0.6 176,328 - +0.3 176,457 + -1.5 176,469 + -1.1 176,469 + -0.3 176,472 - -0.2 176,603 + CA264_21530 0.40 -0.4 176,606 + CA264_21530 0.41 -0.8 176,636 + CA264_21530 0.50 +0.1 176,636 + CA264_21530 0.50 -1.1 176,636 + CA264_21530 0.50 -0.1 176,640 + CA264_21530 0.51 +0.8 176,641 - CA264_21530 0.52 -0.2 176,662 + CA264_21530 0.58 -2.0 176,663 - CA264_21530 0.58 -0.4 176,742 + CA264_21530 0.83 -0.5 176,773 + -1.5 176,774 - -0.1 176,777 + -1.0 176,777 + -0.4 176,778 - -0.5 176,778 - -1.2 176,799 - -0.4 176,810 - -0.2 176,831 - +0.0 176,831 - +0.2 176,831 - +0.5 176,831 - +0.1 176,831 - -0.5 176,860 - +0.9 176,860 - -0.9 176,880 + -0.1 176,881 - -0.7 176,883 + -1.8 176,892 + -1.0 176,948 + -2.2 176,948 + -2.1 176,949 - +0.4 176,953 + -2.6 176,970 - +0.7 177,037 + -0.9 177,037 + -1.5 177,038 - -0.5 177,038 - +0.1 177,055 + -0.9 177,075 + CA264_21535 0.11 -1.2 177,095 + CA264_21535 0.17 -2.9 177,099 + CA264_21535 0.18 -1.7 177,099 + CA264_21535 0.18 -1.0 177,099 + CA264_21535 0.18 -0.3 177,142 - CA264_21535 0.30 -0.1 177,150 - CA264_21535 0.32 -1.3 177,183 + CA264_21535 0.41 -1.6 177,212 + CA264_21535 0.49 -0.6 177,234 + CA264_21535 0.55 -0.4 177,234 + CA264_21535 0.55 -0.9 177,235 - CA264_21535 0.55 -0.4 177,236 + CA264_21535 0.55 -1.7 177,236 + CA264_21535 0.55 -1.0 177,236 + CA264_21535 0.55 -0.9 177,240 + CA264_21535 0.56 -2.1 177,241 - CA264_21535 0.57 -0.7
Or see this region's nucleotide sequence