Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20780 and CA264_20785 are separated by 243 nucleotides CA264_20785 and CA264_20790 are separated by 46 nucleotides
CA264_20780: CA264_20780 - alpha-glucan family phosphorylase, at 16,983 to 18,638
_20780
CA264_20785: CA264_20785 - hypothetical protein, at 18,882 to 19,229
_20785
CA264_20790: CA264_20790 - glyceraldehyde-3-phosphate dehydrogenase, at 19,276 to 20,313
_20790
Position (kb) 18
19
20 Strain fitness (log2 ratio) -2
-1
0
1
2 at 17.885 kb on + strand, within CA264_20780 at 17.895 kb on + strand, within CA264_20780 at 17.895 kb on + strand, within CA264_20780 at 18.012 kb on + strand, within CA264_20780 at 18.046 kb on + strand, within CA264_20780 at 18.050 kb on + strand, within CA264_20780 at 18.050 kb on + strand, within CA264_20780 at 18.100 kb on + strand, within CA264_20780 at 18.101 kb on - strand, within CA264_20780 at 18.101 kb on - strand, within CA264_20780 at 18.101 kb on - strand, within CA264_20780 at 18.101 kb on - strand, within CA264_20780 at 18.102 kb on + strand, within CA264_20780 at 18.102 kb on + strand, within CA264_20780 at 18.103 kb on - strand, within CA264_20780 at 18.103 kb on - strand, within CA264_20780 at 18.137 kb on + strand, within CA264_20780 at 18.138 kb on - strand, within CA264_20780 at 18.156 kb on + strand, within CA264_20780 at 18.156 kb on + strand, within CA264_20780 at 18.157 kb on - strand, within CA264_20780 at 18.157 kb on - strand, within CA264_20780 at 18.162 kb on - strand, within CA264_20780 at 18.196 kb on + strand, within CA264_20780 at 18.197 kb on - strand, within CA264_20780 at 18.226 kb on + strand, within CA264_20780 at 18.227 kb on - strand, within CA264_20780 at 18.253 kb on - strand, within CA264_20780 at 18.295 kb on + strand, within CA264_20780 at 18.296 kb on - strand, within CA264_20780 at 18.298 kb on + strand, within CA264_20780 at 18.299 kb on - strand, within CA264_20780 at 18.328 kb on - strand, within CA264_20780 at 18.371 kb on - strand, within CA264_20780 at 18.372 kb on + strand, within CA264_20780 at 18.373 kb on - strand, within CA264_20780 at 18.373 kb on - strand, within CA264_20780 at 18.398 kb on + strand, within CA264_20780 at 18.398 kb on + strand, within CA264_20780 at 18.399 kb on - strand, within CA264_20780 at 18.413 kb on + strand, within CA264_20780 at 18.413 kb on + strand, within CA264_20780 at 18.413 kb on + strand, within CA264_20780 at 18.413 kb on + strand, within CA264_20780 at 18.427 kb on + strand, within CA264_20780 at 18.427 kb on + strand, within CA264_20780 at 18.427 kb on + strand, within CA264_20780 at 18.428 kb on - strand, within CA264_20780 at 18.428 kb on - strand, within CA264_20780 at 18.446 kb on - strand, within CA264_20780 at 18.527 kb on + strand at 18.529 kb on + strand at 18.529 kb on + strand at 18.530 kb on - strand at 18.557 kb on - strand at 18.571 kb on + strand at 18.571 kb on + strand at 18.572 kb on - strand at 18.589 kb on + strand at 18.590 kb on - strand at 18.601 kb on + strand at 18.602 kb on - strand at 18.607 kb on + strand at 18.608 kb on - strand at 18.608 kb on - strand at 18.608 kb on - strand at 18.608 kb on - strand at 18.615 kb on + strand at 18.616 kb on - strand at 18.638 kb on + strand at 18.638 kb on + strand at 18.638 kb on + strand at 18.638 kb on + strand at 18.639 kb on - strand at 18.639 kb on - strand at 18.642 kb on + strand at 18.643 kb on - strand at 18.647 kb on + strand at 18.710 kb on + strand at 18.732 kb on + strand at 18.759 kb on - strand at 18.823 kb on + strand at 18.825 kb on + strand at 18.825 kb on + strand at 18.826 kb on - strand at 18.863 kb on + strand at 18.863 kb on + strand at 18.863 kb on + strand at 18.863 kb on + strand at 18.864 kb on - strand at 18.900 kb on + strand at 18.900 kb on + strand at 18.900 kb on + strand at 18.900 kb on + strand at 18.901 kb on - strand at 18.901 kb on - strand at 18.912 kb on + strand at 18.913 kb on - strand at 18.955 kb on - strand, within CA264_20785 at 18.973 kb on + strand, within CA264_20785 at 18.974 kb on - strand, within CA264_20785 at 19.051 kb on + strand, within CA264_20785 at 19.051 kb on + strand, within CA264_20785 at 19.162 kb on + strand, within CA264_20785 at 19.163 kb on - strand, within CA264_20785 at 19.164 kb on + strand, within CA264_20785 at 19.165 kb on - strand, within CA264_20785 at 19.165 kb on - strand, within CA264_20785 at 19.166 kb on + strand, within CA264_20785 at 19.166 kb on + strand, within CA264_20785 at 19.218 kb on - strand at 19.241 kb on + strand at 19.246 kb on + strand at 19.246 kb on + strand at 19.247 kb on - strand at 19.247 kb on - strand at 19.247 kb on - strand at 19.282 kb on + strand at 19.283 kb on - strand at 19.421 kb on + strand, within CA264_20790 at 19.421 kb on + strand, within CA264_20790 at 19.422 kb on - strand, within CA264_20790 at 19.441 kb on + strand, within CA264_20790 at 19.475 kb on + strand, within CA264_20790 at 19.475 kb on + strand, within CA264_20790 at 19.476 kb on - strand, within CA264_20790 at 19.476 kb on - strand, within CA264_20790 at 19.519 kb on + strand, within CA264_20790 at 19.691 kb on - strand, within CA264_20790 at 19.736 kb on - strand, within CA264_20790 at 19.758 kb on + strand, within CA264_20790 at 19.758 kb on + strand, within CA264_20790 at 19.759 kb on - strand, within CA264_20790 at 19.879 kb on - strand, within CA264_20790 at 20.021 kb on - strand at 20.036 kb on - strand, within CA264_20790 at 20.153 kb on + strand, within CA264_20790 at 20.163 kb on - strand, within CA264_20790 at 20.173 kb on + strand, within CA264_20790
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 17,885 + CA264_20780 0.54 -0.2 17,895 + CA264_20780 0.55 +0.2 17,895 + CA264_20780 0.55 -0.5 18,012 + CA264_20780 0.62 +0.1 18,046 + CA264_20780 0.64 +0.3 18,050 + CA264_20780 0.64 -1.6 18,050 + CA264_20780 0.64 -0.3 18,100 + CA264_20780 0.67 -0.1 18,101 - CA264_20780 0.68 -0.3 18,101 - CA264_20780 0.68 -0.5 18,101 - CA264_20780 0.68 -1.3 18,101 - CA264_20780 0.68 +1.9 18,102 + CA264_20780 0.68 +0.2 18,102 + CA264_20780 0.68 -1.0 18,103 - CA264_20780 0.68 -0.4 18,103 - CA264_20780 0.68 +0.6 18,137 + CA264_20780 0.70 +0.9 18,138 - CA264_20780 0.70 +0.5 18,156 + CA264_20780 0.71 -0.4 18,156 + CA264_20780 0.71 +0.2 18,157 - CA264_20780 0.71 -0.6 18,157 - CA264_20780 0.71 -0.2 18,162 - CA264_20780 0.71 -1.0 18,196 + CA264_20780 0.73 -1.5 18,197 - CA264_20780 0.73 +0.2 18,226 + CA264_20780 0.75 -0.4 18,227 - CA264_20780 0.75 +0.9 18,253 - CA264_20780 0.77 -0.4 18,295 + CA264_20780 0.79 -1.8 18,296 - CA264_20780 0.79 +0.5 18,298 + CA264_20780 0.79 -0.5 18,299 - CA264_20780 0.79 +0.0 18,328 - CA264_20780 0.81 -0.2 18,371 - CA264_20780 0.84 -1.0 18,372 + CA264_20780 0.84 -1.2 18,373 - CA264_20780 0.84 +0.7 18,373 - CA264_20780 0.84 +0.9 18,398 + CA264_20780 0.85 -1.7 18,398 + CA264_20780 0.85 -0.4 18,399 - CA264_20780 0.86 -0.6 18,413 + CA264_20780 0.86 -0.1 18,413 + CA264_20780 0.86 -1.5 18,413 + CA264_20780 0.86 -0.3 18,413 + CA264_20780 0.86 +0.4 18,427 + CA264_20780 0.87 -0.3 18,427 + CA264_20780 0.87 -1.2 18,427 + CA264_20780 0.87 -0.6 18,428 - CA264_20780 0.87 +0.6 18,428 - CA264_20780 0.87 +0.0 18,446 - CA264_20780 0.88 +0.1 18,527 + -0.2 18,529 + -2.3 18,529 + +0.2 18,530 - +0.3 18,557 - +0.7 18,571 + +0.5 18,571 + +0.1 18,572 - -0.4 18,589 + -0.6 18,590 - -0.1 18,601 + +1.8 18,602 - +0.4 18,607 + -0.2 18,608 - -0.9 18,608 - +0.2 18,608 - -2.2 18,608 - -1.1 18,615 + -0.2 18,616 - -0.2 18,638 + -0.4 18,638 + +0.4 18,638 + +1.3 18,638 + -1.5 18,639 - -0.2 18,639 - -0.4 18,642 + -0.8 18,643 - -0.1 18,647 + -0.4 18,710 + +0.5 18,732 + -0.4 18,759 - -0.4 18,823 + -0.2 18,825 + +0.4 18,825 + +0.1 18,826 - -0.6 18,863 + +0.1 18,863 + +0.1 18,863 + -1.1 18,863 + -0.6 18,864 - -0.6 18,900 + +0.4 18,900 + -0.4 18,900 + -1.2 18,900 + -0.2 18,901 - +0.4 18,901 - +0.2 18,912 + -0.1 18,913 - +0.4 18,955 - CA264_20785 0.21 -0.5 18,973 + CA264_20785 0.26 -0.5 18,974 - CA264_20785 0.26 -0.6 19,051 + CA264_20785 0.49 -0.3 19,051 + CA264_20785 0.49 -0.5 19,162 + CA264_20785 0.80 -0.2 19,163 - CA264_20785 0.81 -0.1 19,164 + CA264_20785 0.81 +0.3 19,165 - CA264_20785 0.81 -0.7 19,165 - CA264_20785 0.81 -0.4 19,166 + CA264_20785 0.82 +0.6 19,166 + CA264_20785 0.82 -0.0 19,218 - -0.0 19,241 + -0.2 19,246 + +0.4 19,246 + -0.7 19,247 - +0.1 19,247 - -0.0 19,247 - -0.2 19,282 + -0.4 19,283 - -0.8 19,421 + CA264_20790 0.14 +0.9 19,421 + CA264_20790 0.14 -0.6 19,422 - CA264_20790 0.14 -0.1 19,441 + CA264_20790 0.16 -0.0 19,475 + CA264_20790 0.19 -0.2 19,475 + CA264_20790 0.19 +0.5 19,476 - CA264_20790 0.19 -0.5 19,476 - CA264_20790 0.19 -0.4 19,519 + CA264_20790 0.23 -2.4 19,691 - CA264_20790 0.40 -0.9 19,736 - CA264_20790 0.44 -1.0 19,758 + CA264_20790 0.46 +0.2 19,758 + CA264_20790 0.46 -0.4 19,759 - CA264_20790 0.47 -0.0 19,879 - CA264_20790 0.58 +0.0 20,021 - +0.4 20,036 - CA264_20790 0.73 +0.5 20,153 + CA264_20790 0.84 -0.5 20,163 - CA264_20790 0.85 +0.1 20,173 + CA264_20790 0.86 -0.2
Or see this region's nucleotide sequence