Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_20775

Experiment: m.b. Chlorite 0.2 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_20770 and CA264_20775 are separated by 93 nucleotidesCA264_20775 and CA264_20780 are separated by 532 nucleotides CA264_20770: CA264_20770 - oxidoreductase, at 13,793 to 15,757 _20770 CA264_20775: CA264_20775 - hypothetical protein, at 15,851 to 16,450 _20775 CA264_20780: CA264_20780 - alpha-glucan family phosphorylase, at 16,983 to 18,638 _20780 Position (kb) 15 16 17Strain fitness (log2 ratio) -2 -1 0 1at 14.913 kb on - strand, within CA264_20770at 14.927 kb on - strand, within CA264_20770at 15.096 kb on + strand, within CA264_20770at 15.097 kb on - strand, within CA264_20770at 15.097 kb on - strand, within CA264_20770at 15.097 kb on - strand, within CA264_20770at 15.142 kb on + strand, within CA264_20770at 15.143 kb on - strand, within CA264_20770at 15.148 kb on - strand, within CA264_20770at 15.188 kb on + strand, within CA264_20770at 15.188 kb on + strand, within CA264_20770at 15.189 kb on - strand, within CA264_20770at 15.199 kb on - strand, within CA264_20770at 15.205 kb on + strand, within CA264_20770at 15.239 kb on + strand, within CA264_20770at 15.352 kb on - strand, within CA264_20770at 15.432 kb on - strand, within CA264_20770at 15.441 kb on - strand, within CA264_20770at 15.492 kb on + strand, within CA264_20770at 15.514 kb on + strand, within CA264_20770at 15.659 kb on - strandat 15.708 kb on - strandat 15.737 kb on + strandat 15.822 kb on + strandat 15.829 kb on - strandat 15.852 kb on + strandat 15.852 kb on + strandat 15.853 kb on - strandat 15.853 kb on - strandat 15.856 kb on + strandat 15.889 kb on + strandat 15.890 kb on - strandat 15.905 kb on - strandat 15.916 kb on + strand, within CA264_20775at 15.917 kb on - strand, within CA264_20775at 15.917 kb on - strand, within CA264_20775at 15.928 kb on + strand, within CA264_20775at 15.983 kb on - strand, within CA264_20775at 16.066 kb on + strand, within CA264_20775at 16.066 kb on + strand, within CA264_20775at 16.067 kb on - strand, within CA264_20775at 16.087 kb on + strand, within CA264_20775at 16.088 kb on - strand, within CA264_20775at 16.088 kb on - strand, within CA264_20775at 16.088 kb on - strand, within CA264_20775at 16.144 kb on + strand, within CA264_20775at 16.144 kb on + strand, within CA264_20775at 16.145 kb on - strand, within CA264_20775at 16.145 kb on - strand, within CA264_20775at 16.207 kb on + strand, within CA264_20775at 16.207 kb on + strand, within CA264_20775at 16.208 kb on - strand, within CA264_20775at 16.312 kb on + strand, within CA264_20775at 16.312 kb on + strand, within CA264_20775at 16.312 kb on + strand, within CA264_20775at 16.313 kb on - strand, within CA264_20775at 16.313 kb on - strand, within CA264_20775at 16.365 kb on - strand, within CA264_20775at 16.367 kb on - strand, within CA264_20775at 16.396 kb on + strandat 16.397 kb on - strandat 16.430 kb on + strandat 16.431 kb on - strandat 16.453 kb on + strandat 16.453 kb on + strandat 16.462 kb on + strandat 16.525 kb on + strandat 16.526 kb on - strandat 16.526 kb on - strandat 16.548 kb on + strandat 16.549 kb on - strandat 16.552 kb on + strandat 16.553 kb on - strandat 16.553 kb on - strandat 16.553 kb on - strandat 16.557 kb on - strandat 16.592 kb on + strandat 16.641 kb on - strandat 16.670 kb on + strandat 16.670 kb on + strandat 16.670 kb on + strandat 16.686 kb on + strandat 16.686 kb on + strandat 16.697 kb on + strandat 16.698 kb on - strandat 16.734 kb on + strandat 16.734 kb on + strandat 16.735 kb on - strandat 16.735 kb on - strandat 16.735 kb on - strandat 16.735 kb on - strandat 16.741 kb on - strandat 16.745 kb on + strandat 16.763 kb on - strandat 16.767 kb on + strandat 16.767 kb on + strandat 16.767 kb on + strandat 16.858 kb on + strandat 16.868 kb on - strandat 16.868 kb on - strandat 16.883 kb on + strandat 16.951 kb on + strandat 16.951 kb on + strandat 16.951 kb on + strandat 16.951 kb on + strandat 16.954 kb on + strandat 16.992 kb on - strandat 16.993 kb on + strandat 16.994 kb on - strandat 16.994 kb on - strandat 16.994 kb on - strandat 17.006 kb on - strandat 17.008 kb on + strandat 17.008 kb on + strandat 17.008 kb on + strandat 17.008 kb on + strandat 17.009 kb on - strandat 17.098 kb on + strandat 17.130 kb on - strandat 17.289 kb on - strand, within CA264_20780at 17.327 kb on + strand, within CA264_20780at 17.331 kb on + strand, within CA264_20780at 17.386 kb on - strand, within CA264_20780at 17.408 kb on - strand, within CA264_20780at 17.424 kb on + strand, within CA264_20780at 17.424 kb on + strand, within CA264_20780

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM
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14,913 - CA264_20770 0.57 -0.1
14,927 - CA264_20770 0.58 +0.4
15,096 + CA264_20770 0.66 +0.8
15,097 - CA264_20770 0.66 -0.0
15,097 - CA264_20770 0.66 -0.5
15,097 - CA264_20770 0.66 -0.4
15,142 + CA264_20770 0.69 -0.5
15,143 - CA264_20770 0.69 -0.3
15,148 - CA264_20770 0.69 -0.7
15,188 + CA264_20770 0.71 -0.5
15,188 + CA264_20770 0.71 +0.2
15,189 - CA264_20770 0.71 -0.3
15,199 - CA264_20770 0.72 -0.5
15,205 + CA264_20770 0.72 +0.0
15,239 + CA264_20770 0.74 -0.0
15,352 - CA264_20770 0.79 -0.8
15,432 - CA264_20770 0.83 -0.6
15,441 - CA264_20770 0.84 -0.3
15,492 + CA264_20770 0.86 -0.1
15,514 + CA264_20770 0.88 +0.3
15,659 - -0.6
15,708 - +0.2
15,737 + -0.4
15,822 + -1.7
15,829 - -1.3
15,852 + -0.2
15,852 + -0.4
15,853 - -1.1
15,853 - -0.2
15,856 + +0.7
15,889 + -0.4
15,890 - -0.1
15,905 - -0.4
15,916 + CA264_20775 0.11 -0.1
15,917 - CA264_20775 0.11 +0.3
15,917 - CA264_20775 0.11 +0.2
15,928 + CA264_20775 0.13 +0.1
15,983 - CA264_20775 0.22 +0.1
16,066 + CA264_20775 0.36 -0.5
16,066 + CA264_20775 0.36 -0.1
16,067 - CA264_20775 0.36 -1.1
16,087 + CA264_20775 0.39 -0.2
16,088 - CA264_20775 0.40 -0.5
16,088 - CA264_20775 0.40 -0.5
16,088 - CA264_20775 0.40 -0.4
16,144 + CA264_20775 0.49 +0.2
16,144 + CA264_20775 0.49 +0.9
16,145 - CA264_20775 0.49 +0.1
16,145 - CA264_20775 0.49 -0.5
16,207 + CA264_20775 0.59 -0.2
16,207 + CA264_20775 0.59 -0.2
16,208 - CA264_20775 0.59 -1.0
16,312 + CA264_20775 0.77 +0.0
16,312 + CA264_20775 0.77 +1.4
16,312 + CA264_20775 0.77 -0.7
16,313 - CA264_20775 0.77 -0.4
16,313 - CA264_20775 0.77 -0.7
16,365 - CA264_20775 0.86 -0.4
16,367 - CA264_20775 0.86 -0.0
16,396 + -0.8
16,397 - +0.9
16,430 + +0.7
16,431 - -0.8
16,453 + -0.1
16,453 + -0.6
16,462 + -0.5
16,525 + -1.8
16,526 - +0.4
16,526 - +0.3
16,548 + -1.1
16,549 - +0.5
16,552 + -0.4
16,553 - +0.2
16,553 - -0.9
16,553 - -0.4
16,557 - -0.4
16,592 + -0.4
16,641 - -0.0
16,670 + -1.4
16,670 + -0.1
16,670 + -1.2
16,686 + +0.1
16,686 + +0.0
16,697 + -1.5
16,698 - -0.1
16,734 + -0.4
16,734 + -0.8
16,735 - +0.3
16,735 - -2.2
16,735 - -0.5
16,735 - +0.1
16,741 - -0.1
16,745 + -1.2
16,763 - -0.3
16,767 + +0.4
16,767 + +0.4
16,767 + -1.2
16,858 + +0.2
16,868 - -0.6
16,868 - -0.2
16,883 + -0.2
16,951 + -0.3
16,951 + +0.8
16,951 + -0.1
16,951 + -0.0
16,954 + -0.2
16,992 - -0.7
16,993 + +0.3
16,994 - -0.4
16,994 - -0.6
16,994 - +0.2
17,006 - -0.4
17,008 + +0.4
17,008 + -0.9
17,008 + -0.6
17,008 + -0.7
17,009 - -0.5
17,098 + +0.2
17,130 - -1.2
17,289 - CA264_20780 0.18 -0.2
17,327 + CA264_20780 0.21 -0.3
17,331 + CA264_20780 0.21 -1.2
17,386 - CA264_20780 0.24 -0.4
17,408 - CA264_20780 0.26 -1.5
17,424 + CA264_20780 0.27 -0.1
17,424 + CA264_20780 0.27 +0.4

Or see this region's nucleotide sequence