Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20300 and CA264_20305 are separated by 405 nucleotides CA264_20305 and CA264_20310 are separated by 66 nucleotides CA264_20310 and CA264_20315 are separated by 236 nucleotides
CA264_20300: CA264_20300 - hypothetical protein, at 4,679,076 to 4,679,801
_20300
CA264_20305: CA264_20305 - tRNA-Arg, at 4,680,207 to 4,680,280
_20305
CA264_20310: CA264_20310 - TVP38/TMEM64 family protein, at 4,680,347 to 4,681,069
_20310
CA264_20315: CA264_20315 - cystathionine gamma-synthase, at 4,681,306 to 4,682,445
_20315
Position (kb)
4680
4681
4682 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 4679.813 kb on + strand at 4679.817 kb on + strand at 4679.823 kb on - strand at 4679.907 kb on + strand at 4679.907 kb on + strand at 4679.910 kb on + strand at 4679.916 kb on + strand at 4679.916 kb on + strand at 4679.917 kb on - strand at 4679.917 kb on - strand at 4679.938 kb on - strand at 4679.938 kb on - strand at 4679.965 kb on + strand at 4680.018 kb on + strand at 4680.123 kb on + strand at 4680.124 kb on - strand at 4680.677 kb on + strand, within CA264_20310 at 4680.678 kb on - strand, within CA264_20310 at 4680.763 kb on - strand, within CA264_20310 at 4680.786 kb on + strand, within CA264_20310 at 4680.854 kb on - strand, within CA264_20310 at 4680.890 kb on - strand, within CA264_20310 at 4680.946 kb on - strand, within CA264_20310 at 4680.957 kb on - strand, within CA264_20310 at 4680.959 kb on + strand, within CA264_20310 at 4680.959 kb on + strand, within CA264_20310 at 4680.960 kb on - strand, within CA264_20310 at 4680.960 kb on - strand, within CA264_20310 at 4681.140 kb on - strand at 4681.151 kb on + strand at 4681.205 kb on + strand at 4681.243 kb on + strand at 4681.244 kb on - strand at 4681.244 kb on - strand at 4681.245 kb on + strand at 4681.245 kb on + strand at 4681.246 kb on - strand at 4681.288 kb on - strand at 4681.288 kb on - strand at 4681.288 kb on - strand at 4681.292 kb on - strand at 4681.294 kb on - strand at 4681.327 kb on - strand at 4681.377 kb on + strand at 4681.377 kb on + strand at 4681.381 kb on + strand at 4681.382 kb on - strand at 4681.396 kb on + strand at 4681.397 kb on - strand at 4681.397 kb on - strand at 4681.429 kb on + strand, within CA264_20315 at 4681.598 kb on - strand, within CA264_20315 at 4681.635 kb on + strand, within CA264_20315 at 4681.635 kb on + strand, within CA264_20315 at 4681.636 kb on - strand, within CA264_20315 at 4681.639 kb on + strand, within CA264_20315 at 4681.640 kb on - strand, within CA264_20315 at 4681.647 kb on + strand, within CA264_20315 at 4681.785 kb on + strand, within CA264_20315 at 4681.786 kb on - strand, within CA264_20315 at 4681.835 kb on - strand, within CA264_20315 at 4681.891 kb on + strand, within CA264_20315 at 4681.913 kb on + strand, within CA264_20315 at 4681.914 kb on - strand, within CA264_20315
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 4,679,813 + -1.8 4,679,817 + -1.2 4,679,823 - +0.8 4,679,907 + -0.9 4,679,907 + -0.9 4,679,910 + -0.7 4,679,916 + -1.4 4,679,916 + +0.2 4,679,917 - -0.1 4,679,917 - +2.5 4,679,938 - -1.3 4,679,938 - -0.1 4,679,965 + -1.6 4,680,018 + -1.2 4,680,123 + -0.5 4,680,124 - +0.2 4,680,677 + CA264_20310 0.46 -3.3 4,680,678 - CA264_20310 0.46 -2.8 4,680,763 - CA264_20310 0.58 -4.8 4,680,786 + CA264_20310 0.61 -3.1 4,680,854 - CA264_20310 0.70 -1.5 4,680,890 - CA264_20310 0.75 -1.9 4,680,946 - CA264_20310 0.83 -3.6 4,680,957 - CA264_20310 0.84 -3.7 4,680,959 + CA264_20310 0.85 +0.3 4,680,959 + CA264_20310 0.85 -0.1 4,680,960 - CA264_20310 0.85 -2.4 4,680,960 - CA264_20310 0.85 -1.8 4,681,140 - +0.2 4,681,151 + +0.2 4,681,205 + +0.1 4,681,243 + -0.8 4,681,244 - -0.4 4,681,244 - -0.1 4,681,245 + +0.8 4,681,245 + +0.0 4,681,246 - -0.1 4,681,288 - +0.1 4,681,288 - +0.2 4,681,288 - -0.1 4,681,292 - +0.3 4,681,294 - +0.1 4,681,327 - +0.5 4,681,377 + +0.8 4,681,377 + -1.4 4,681,381 + -0.3 4,681,382 - -0.0 4,681,396 + +0.4 4,681,397 - -1.5 4,681,397 - -1.2 4,681,429 + CA264_20315 0.11 +0.0 4,681,598 - CA264_20315 0.26 -0.4 4,681,635 + CA264_20315 0.29 -1.3 4,681,635 + CA264_20315 0.29 +0.0 4,681,636 - CA264_20315 0.29 -0.2 4,681,639 + CA264_20315 0.29 +0.2 4,681,640 - CA264_20315 0.29 +0.7 4,681,647 + CA264_20315 0.30 -0.3 4,681,785 + CA264_20315 0.42 +0.9 4,681,786 - CA264_20315 0.42 -0.2 4,681,835 - CA264_20315 0.46 +0.2 4,681,891 + CA264_20315 0.51 -0.4 4,681,913 + CA264_20315 0.53 -0.4 4,681,914 - CA264_20315 0.53 +0.8
Or see this region's nucleotide sequence