Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17995 and CA264_18000 are separated by 299 nucleotides CA264_18000 and CA264_18005 are separated by 114 nucleotides CA264_18005 and CA264_18010 are separated by 349 nucleotides
CA264_17995: CA264_17995 - 2-hydroxymuconic semialdehyde dehydrogenase, at 4,183,563 to 4,185,008
_17995
CA264_18000: CA264_18000 - short-chain dehydrogenase, at 4,185,308 to 4,186,096
_18000
CA264_18005: CA264_18005 - 3-hydroxyanthranilate 3,4-dioxygenase, at 4,186,211 to 4,186,735
_18005
CA264_18010: CA264_18010 - 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase, at 4,187,085 to 4,188,122
_18010
Position (kb)
4185
4186
4187 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4184.350 kb on - strand, within CA264_17995 at 4184.354 kb on + strand, within CA264_17995 at 4184.355 kb on - strand, within CA264_17995 at 4184.380 kb on - strand, within CA264_17995 at 4184.424 kb on + strand, within CA264_17995 at 4184.424 kb on + strand, within CA264_17995 at 4184.424 kb on + strand, within CA264_17995 at 4184.425 kb on - strand, within CA264_17995 at 4184.425 kb on - strand, within CA264_17995 at 4184.458 kb on + strand, within CA264_17995 at 4184.538 kb on - strand, within CA264_17995 at 4184.538 kb on - strand, within CA264_17995 at 4184.538 kb on - strand, within CA264_17995 at 4184.546 kb on - strand, within CA264_17995 at 4184.546 kb on - strand, within CA264_17995 at 4184.547 kb on + strand, within CA264_17995 at 4184.548 kb on - strand, within CA264_17995 at 4184.603 kb on + strand, within CA264_17995 at 4184.604 kb on - strand, within CA264_17995 at 4184.604 kb on - strand, within CA264_17995 at 4184.604 kb on - strand, within CA264_17995 at 4184.605 kb on + strand, within CA264_17995 at 4184.605 kb on + strand, within CA264_17995 at 4184.605 kb on + strand, within CA264_17995 at 4184.632 kb on + strand, within CA264_17995 at 4184.659 kb on - strand, within CA264_17995 at 4184.684 kb on + strand, within CA264_17995 at 4184.706 kb on + strand, within CA264_17995 at 4184.732 kb on + strand, within CA264_17995 at 4184.742 kb on + strand, within CA264_17995 at 4184.742 kb on + strand, within CA264_17995 at 4184.743 kb on - strand, within CA264_17995 at 4184.794 kb on - strand, within CA264_17995 at 4184.794 kb on - strand, within CA264_17995 at 4184.906 kb on + strand at 4184.915 kb on - strand at 4184.916 kb on + strand at 4184.916 kb on + strand at 4184.916 kb on + strand at 4184.916 kb on + strand at 4184.917 kb on - strand at 4184.917 kb on - strand at 4184.917 kb on - strand at 4184.917 kb on - strand at 4184.917 kb on - strand at 4184.917 kb on - strand at 4184.936 kb on + strand at 4184.937 kb on - strand at 4184.938 kb on + strand at 4184.938 kb on + strand at 4184.938 kb on + strand at 4184.939 kb on - strand at 4184.939 kb on - strand at 4184.939 kb on - strand at 4184.939 kb on - strand at 4184.939 kb on - strand at 4184.939 kb on - strand at 4184.950 kb on + strand at 4184.974 kb on - strand at 4184.989 kb on + strand at 4185.035 kb on + strand at 4185.043 kb on - strand at 4185.055 kb on + strand at 4185.056 kb on - strand at 4185.059 kb on + strand at 4185.059 kb on + strand at 4185.060 kb on - strand at 4185.060 kb on - strand at 4185.137 kb on + strand at 4185.193 kb on - strand at 4185.218 kb on + strand at 4185.228 kb on + strand at 4185.228 kb on + strand at 4185.243 kb on + strand at 4185.243 kb on + strand at 4185.244 kb on - strand at 4185.247 kb on - strand at 4185.247 kb on - strand at 4185.253 kb on + strand at 4185.336 kb on - strand at 4185.360 kb on + strand at 4185.458 kb on + strand, within CA264_18000 at 4185.505 kb on + strand, within CA264_18000 at 4185.505 kb on + strand, within CA264_18000 at 4185.511 kb on + strand, within CA264_18000 at 4185.512 kb on - strand, within CA264_18000 at 4185.512 kb on - strand, within CA264_18000 at 4185.552 kb on - strand, within CA264_18000 at 4185.560 kb on - strand, within CA264_18000 at 4185.657 kb on - strand, within CA264_18000 at 4185.706 kb on + strand, within CA264_18000 at 4185.706 kb on + strand, within CA264_18000 at 4185.708 kb on + strand, within CA264_18000 at 4185.708 kb on + strand, within CA264_18000 at 4185.709 kb on - strand, within CA264_18000 at 4185.792 kb on - strand, within CA264_18000 at 4185.792 kb on - strand, within CA264_18000 at 4185.835 kb on + strand, within CA264_18000 at 4185.836 kb on - strand, within CA264_18000 at 4185.836 kb on - strand, within CA264_18000 at 4185.836 kb on - strand, within CA264_18000 at 4185.836 kb on - strand, within CA264_18000 at 4185.848 kb on + strand, within CA264_18000 at 4185.915 kb on + strand, within CA264_18000 at 4185.915 kb on + strand, within CA264_18000 at 4185.995 kb on - strand, within CA264_18000 at 4186.007 kb on + strand, within CA264_18000 at 4186.102 kb on - strand at 4186.158 kb on + strand at 4186.188 kb on - strand at 4186.198 kb on + strand at 4186.198 kb on + strand at 4186.199 kb on - strand at 4186.210 kb on + strand at 4186.210 kb on + strand at 4186.211 kb on - strand at 4186.324 kb on - strand, within CA264_18005 at 4186.329 kb on + strand, within CA264_18005 at 4186.329 kb on + strand, within CA264_18005 at 4186.342 kb on + strand, within CA264_18005 at 4186.343 kb on - strand, within CA264_18005 at 4186.405 kb on + strand, within CA264_18005 at 4186.603 kb on - strand, within CA264_18005 at 4186.603 kb on - strand, within CA264_18005 at 4186.603 kb on - strand, within CA264_18005 at 4186.603 kb on - strand, within CA264_18005 at 4186.624 kb on - strand, within CA264_18005 at 4186.624 kb on - strand, within CA264_18005 at 4186.789 kb on + strand at 4186.790 kb on - strand at 4186.850 kb on - strand at 4186.870 kb on - strand at 4186.870 kb on - strand at 4186.871 kb on + strand at 4186.900 kb on - strand at 4186.919 kb on + strand at 4186.920 kb on - strand at 4186.920 kb on - strand at 4186.920 kb on - strand at 4186.926 kb on + strand at 4186.926 kb on + strand at 4186.953 kb on + strand at 4186.954 kb on - strand at 4186.954 kb on - strand at 4186.963 kb on + strand at 4186.984 kb on - strand at 4186.984 kb on - strand at 4186.986 kb on - strand at 4187.004 kb on - strand at 4187.019 kb on - strand at 4187.021 kb on - strand at 4187.021 kb on - strand at 4187.027 kb on - strand at 4187.041 kb on - strand at 4187.065 kb on + strand at 4187.066 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 4,184,350 - CA264_17995 0.54 +0.3 4,184,354 + CA264_17995 0.55 +0.3 4,184,355 - CA264_17995 0.55 -0.1 4,184,380 - CA264_17995 0.57 +0.6 4,184,424 + CA264_17995 0.60 +0.6 4,184,424 + CA264_17995 0.60 -0.0 4,184,424 + CA264_17995 0.60 -0.4 4,184,425 - CA264_17995 0.60 +1.5 4,184,425 - CA264_17995 0.60 -0.3 4,184,458 + CA264_17995 0.62 +0.5 4,184,538 - CA264_17995 0.67 -0.6 4,184,538 - CA264_17995 0.67 -0.2 4,184,538 - CA264_17995 0.67 -0.5 4,184,546 - CA264_17995 0.68 +0.3 4,184,546 - CA264_17995 0.68 +0.3 4,184,547 + CA264_17995 0.68 +1.2 4,184,548 - CA264_17995 0.68 -0.6 4,184,603 + CA264_17995 0.72 +0.2 4,184,604 - CA264_17995 0.72 -0.4 4,184,604 - CA264_17995 0.72 +1.0 4,184,604 - CA264_17995 0.72 -0.2 4,184,605 + CA264_17995 0.72 +0.3 4,184,605 + CA264_17995 0.72 +0.0 4,184,605 + CA264_17995 0.72 -0.9 4,184,632 + CA264_17995 0.74 -0.2 4,184,659 - CA264_17995 0.76 +0.0 4,184,684 + CA264_17995 0.78 +0.1 4,184,706 + CA264_17995 0.79 -0.8 4,184,732 + CA264_17995 0.81 +0.1 4,184,742 + CA264_17995 0.82 -0.4 4,184,742 + CA264_17995 0.82 +0.5 4,184,743 - CA264_17995 0.82 -0.7 4,184,794 - CA264_17995 0.85 +0.5 4,184,794 - CA264_17995 0.85 -0.4 4,184,906 + +0.3 4,184,915 - -0.8 4,184,916 + -0.0 4,184,916 + -0.1 4,184,916 + +0.0 4,184,916 + -0.2 4,184,917 - -0.6 4,184,917 - +0.0 4,184,917 - +0.1 4,184,917 - +0.2 4,184,917 - +0.4 4,184,917 - -1.6 4,184,936 + -2.2 4,184,937 - +1.6 4,184,938 + -0.2 4,184,938 + +0.1 4,184,938 + -1.1 4,184,939 - -0.4 4,184,939 - +0.8 4,184,939 - +0.2 4,184,939 - -1.0 4,184,939 - -0.4 4,184,939 - +1.6 4,184,950 + +0.1 4,184,974 - -0.2 4,184,989 + -1.3 4,185,035 + -1.5 4,185,043 - +1.5 4,185,055 + +0.2 4,185,056 - +0.2 4,185,059 + -0.1 4,185,059 + +0.7 4,185,060 - +0.6 4,185,060 - -0.7 4,185,137 + +0.9 4,185,193 - +0.0 4,185,218 + -0.3 4,185,228 + +0.5 4,185,228 + -0.2 4,185,243 + -0.0 4,185,243 + -0.3 4,185,244 - -1.7 4,185,247 - -0.0 4,185,247 - -0.0 4,185,253 + -0.4 4,185,336 - -0.3 4,185,360 + -0.2 4,185,458 + CA264_18000 0.19 +0.1 4,185,505 + CA264_18000 0.25 -0.5 4,185,505 + CA264_18000 0.25 +0.9 4,185,511 + CA264_18000 0.26 -0.0 4,185,512 - CA264_18000 0.26 -0.4 4,185,512 - CA264_18000 0.26 -1.1 4,185,552 - CA264_18000 0.31 -0.4 4,185,560 - CA264_18000 0.32 -0.6 4,185,657 - CA264_18000 0.44 -1.6 4,185,706 + CA264_18000 0.50 +1.0 4,185,706 + CA264_18000 0.50 +0.5 4,185,708 + CA264_18000 0.51 +0.1 4,185,708 + CA264_18000 0.51 +0.4 4,185,709 - CA264_18000 0.51 -0.0 4,185,792 - CA264_18000 0.61 +0.2 4,185,792 - CA264_18000 0.61 -0.0 4,185,835 + CA264_18000 0.67 -0.8 4,185,836 - CA264_18000 0.67 -0.7 4,185,836 - CA264_18000 0.67 -0.5 4,185,836 - CA264_18000 0.67 -0.2 4,185,836 - CA264_18000 0.67 -0.7 4,185,848 + CA264_18000 0.68 -1.1 4,185,915 + CA264_18000 0.77 -0.0 4,185,915 + CA264_18000 0.77 -1.0 4,185,995 - CA264_18000 0.87 +0.1 4,186,007 + CA264_18000 0.89 -0.5 4,186,102 - -0.4 4,186,158 + +0.2 4,186,188 - -0.4 4,186,198 + -0.1 4,186,198 + +2.0 4,186,199 - -0.6 4,186,210 + +2.8 4,186,210 + -0.9 4,186,211 - -1.1 4,186,324 - CA264_18005 0.22 -0.0 4,186,329 + CA264_18005 0.22 +0.5 4,186,329 + CA264_18005 0.22 -0.3 4,186,342 + CA264_18005 0.25 -0.7 4,186,343 - CA264_18005 0.25 -0.4 4,186,405 + CA264_18005 0.37 +0.6 4,186,603 - CA264_18005 0.75 +0.1 4,186,603 - CA264_18005 0.75 +1.0 4,186,603 - CA264_18005 0.75 -0.1 4,186,603 - CA264_18005 0.75 +0.6 4,186,624 - CA264_18005 0.79 +1.2 4,186,624 - CA264_18005 0.79 -0.2 4,186,789 + +0.9 4,186,790 - -0.4 4,186,850 - -0.2 4,186,870 - -0.2 4,186,870 - +0.2 4,186,871 + +0.6 4,186,900 - +1.2 4,186,919 + +0.5 4,186,920 - -0.3 4,186,920 - +1.8 4,186,920 - +0.1 4,186,926 + -0.0 4,186,926 + +0.3 4,186,953 + +0.1 4,186,954 - -0.4 4,186,954 - -0.5 4,186,963 + -0.4 4,186,984 - +0.7 4,186,984 - +0.5 4,186,986 - +0.3 4,187,004 - +0.5 4,187,019 - +0.1 4,187,021 - -0.7 4,187,021 - +0.4 4,187,027 - -0.2 4,187,041 - -0.4 4,187,065 + -0.3 4,187,066 - +0.1
Or see this region's nucleotide sequence