Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17925 and CA264_17930 are separated by 70 nucleotides CA264_17930 and CA264_17935 are separated by 97 nucleotides
CA264_17925: CA264_17925 - chromate transporter, at 4,166,731 to 4,167,903
_17925
CA264_17930: CA264_17930 - flavonol synthase, at 4,167,974 to 4,168,957
_17930
CA264_17935: CA264_17935 - hypothetical protein, at 4,169,055 to 4,169,897
_17935
Position (kb)
4167
4168
4169 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4167.016 kb on + strand, within CA264_17925 at 4167.070 kb on - strand, within CA264_17925 at 4167.073 kb on + strand, within CA264_17925 at 4167.073 kb on + strand, within CA264_17925 at 4167.073 kb on + strand, within CA264_17925 at 4167.163 kb on - strand, within CA264_17925 at 4167.286 kb on + strand, within CA264_17925 at 4167.315 kb on - strand, within CA264_17925 at 4167.408 kb on + strand, within CA264_17925 at 4167.505 kb on + strand, within CA264_17925 at 4167.519 kb on - strand, within CA264_17925 at 4167.607 kb on - strand, within CA264_17925 at 4167.607 kb on - strand, within CA264_17925 at 4167.628 kb on - strand, within CA264_17925 at 4167.669 kb on - strand, within CA264_17925 at 4167.678 kb on + strand, within CA264_17925 at 4167.693 kb on + strand, within CA264_17925 at 4167.741 kb on + strand, within CA264_17925 at 4167.741 kb on + strand, within CA264_17925 at 4167.781 kb on - strand, within CA264_17925 at 4167.866 kb on - strand at 4167.869 kb on - strand at 4167.886 kb on - strand at 4167.886 kb on - strand at 4167.886 kb on - strand at 4167.887 kb on + strand at 4167.888 kb on - strand at 4167.888 kb on - strand at 4168.018 kb on - strand at 4168.018 kb on - strand at 4168.084 kb on + strand, within CA264_17930 at 4168.085 kb on - strand, within CA264_17930 at 4168.217 kb on - strand, within CA264_17930 at 4168.217 kb on - strand, within CA264_17930 at 4168.224 kb on - strand, within CA264_17930 at 4168.229 kb on + strand, within CA264_17930 at 4168.236 kb on - strand, within CA264_17930 at 4168.336 kb on + strand, within CA264_17930 at 4168.337 kb on - strand, within CA264_17930 at 4168.337 kb on - strand, within CA264_17930 at 4168.402 kb on - strand, within CA264_17930 at 4168.537 kb on + strand, within CA264_17930 at 4168.584 kb on + strand, within CA264_17930 at 4168.641 kb on + strand, within CA264_17930 at 4168.734 kb on + strand, within CA264_17930 at 4168.746 kb on - strand, within CA264_17930 at 4168.785 kb on + strand, within CA264_17930 at 4168.786 kb on - strand, within CA264_17930 at 4168.959 kb on + strand at 4168.965 kb on + strand at 4168.971 kb on - strand at 4168.985 kb on + strand at 4169.020 kb on + strand at 4169.050 kb on - strand at 4169.053 kb on - strand at 4169.188 kb on + strand, within CA264_17935 at 4169.188 kb on + strand, within CA264_17935 at 4169.198 kb on - strand, within CA264_17935 at 4169.324 kb on + strand, within CA264_17935 at 4169.324 kb on + strand, within CA264_17935 at 4169.325 kb on - strand, within CA264_17935 at 4169.325 kb on - strand, within CA264_17935 at 4169.337 kb on + strand, within CA264_17935 at 4169.338 kb on - strand, within CA264_17935 at 4169.385 kb on - strand, within CA264_17935 at 4169.445 kb on + strand, within CA264_17935 at 4169.612 kb on + strand, within CA264_17935 at 4169.613 kb on - strand, within CA264_17935 at 4169.613 kb on - strand, within CA264_17935 at 4169.620 kb on - strand, within CA264_17935 at 4169.620 kb on - strand, within CA264_17935 at 4169.641 kb on - strand, within CA264_17935 at 4169.747 kb on + strand, within CA264_17935 at 4169.877 kb on - strand at 4169.877 kb on - strand at 4169.911 kb on - strand at 4169.911 kb on - strand at 4169.911 kb on - strand at 4169.916 kb on + strand at 4169.919 kb on - strand at 4169.925 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 4,167,016 + CA264_17925 0.24 -0.7 4,167,070 - CA264_17925 0.29 +0.1 4,167,073 + CA264_17925 0.29 -0.6 4,167,073 + CA264_17925 0.29 +0.2 4,167,073 + CA264_17925 0.29 -1.1 4,167,163 - CA264_17925 0.37 -0.4 4,167,286 + CA264_17925 0.47 +0.9 4,167,315 - CA264_17925 0.50 -0.3 4,167,408 + CA264_17925 0.58 -0.6 4,167,505 + CA264_17925 0.66 +0.3 4,167,519 - CA264_17925 0.67 -0.3 4,167,607 - CA264_17925 0.75 -0.2 4,167,607 - CA264_17925 0.75 -0.3 4,167,628 - CA264_17925 0.76 -1.4 4,167,669 - CA264_17925 0.80 -0.7 4,167,678 + CA264_17925 0.81 -1.3 4,167,693 + CA264_17925 0.82 -0.2 4,167,741 + CA264_17925 0.86 +0.1 4,167,741 + CA264_17925 0.86 +0.5 4,167,781 - CA264_17925 0.90 -0.0 4,167,866 - +0.4 4,167,869 - +0.6 4,167,886 - -1.6 4,167,886 - -1.3 4,167,886 - -0.5 4,167,887 + -1.4 4,167,888 - +0.0 4,167,888 - -0.1 4,168,018 - -0.3 4,168,018 - +0.8 4,168,084 + CA264_17930 0.11 -0.2 4,168,085 - CA264_17930 0.11 -0.3 4,168,217 - CA264_17930 0.25 -0.3 4,168,217 - CA264_17930 0.25 -0.5 4,168,224 - CA264_17930 0.25 -0.0 4,168,229 + CA264_17930 0.26 -1.2 4,168,236 - CA264_17930 0.27 -1.3 4,168,336 + CA264_17930 0.37 -0.1 4,168,337 - CA264_17930 0.37 -0.2 4,168,337 - CA264_17930 0.37 +0.0 4,168,402 - CA264_17930 0.43 -0.4 4,168,537 + CA264_17930 0.57 +0.0 4,168,584 + CA264_17930 0.62 -0.7 4,168,641 + CA264_17930 0.68 -0.2 4,168,734 + CA264_17930 0.77 -0.5 4,168,746 - CA264_17930 0.78 -1.2 4,168,785 + CA264_17930 0.82 +0.4 4,168,786 - CA264_17930 0.83 -0.8 4,168,959 + -0.6 4,168,965 + +0.7 4,168,971 - +0.0 4,168,985 + -0.6 4,169,020 + +0.5 4,169,050 - -0.1 4,169,053 - +0.4 4,169,188 + CA264_17935 0.16 -0.3 4,169,188 + CA264_17935 0.16 +0.1 4,169,198 - CA264_17935 0.17 +0.2 4,169,324 + CA264_17935 0.32 -0.4 4,169,324 + CA264_17935 0.32 -0.8 4,169,325 - CA264_17935 0.32 -0.6 4,169,325 - CA264_17935 0.32 -0.3 4,169,337 + CA264_17935 0.33 +0.0 4,169,338 - CA264_17935 0.34 -0.1 4,169,385 - CA264_17935 0.39 -0.1 4,169,445 + CA264_17935 0.46 -3.5 4,169,612 + CA264_17935 0.66 +1.0 4,169,613 - CA264_17935 0.66 +0.1 4,169,613 - CA264_17935 0.66 -0.2 4,169,620 - CA264_17935 0.67 +0.3 4,169,620 - CA264_17935 0.67 -0.5 4,169,641 - CA264_17935 0.70 -0.7 4,169,747 + CA264_17935 0.82 -0.3 4,169,877 - +0.3 4,169,877 - -0.0 4,169,911 - -1.6 4,169,911 - -0.3 4,169,911 - -1.0 4,169,916 + -0.2 4,169,919 - +0.2 4,169,925 + +0.4
Or see this region's nucleotide sequence