Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17815 and CA264_17820 are separated by 13 nucleotides CA264_17820 and CA264_17825 are separated by 56 nucleotides
CA264_17815: CA264_17815 - hypothetical protein, at 4,142,169 to 4,143,347
_17815
CA264_17820: CA264_17820 - amino acid dehydrogenase, at 4,143,361 to 4,144,593
_17820
CA264_17825: CA264_17825 - anhydro-N-acetylmuramic acid kinase, at 4,144,650 to 4,145,723
_17825
Position (kb)
4143
4144
4145 Strain fitness (log2 ratio)
-2
-1
0
1 at 4142.365 kb on + strand, within CA264_17815 at 4142.366 kb on - strand, within CA264_17815 at 4142.449 kb on - strand, within CA264_17815 at 4142.452 kb on + strand, within CA264_17815 at 4142.452 kb on + strand, within CA264_17815 at 4142.453 kb on - strand, within CA264_17815 at 4142.460 kb on + strand, within CA264_17815 at 4142.472 kb on - strand, within CA264_17815 at 4142.503 kb on + strand, within CA264_17815 at 4142.504 kb on - strand, within CA264_17815 at 4143.074 kb on - strand, within CA264_17815 at 4143.135 kb on + strand, within CA264_17815 at 4143.136 kb on - strand, within CA264_17815 at 4143.240 kb on - strand at 4143.275 kb on - strand at 4143.348 kb on - strand at 4143.348 kb on - strand at 4143.362 kb on + strand at 4143.468 kb on + strand at 4143.481 kb on - strand at 4143.760 kb on + strand, within CA264_17820 at 4143.887 kb on - strand, within CA264_17820 at 4143.887 kb on - strand, within CA264_17820 at 4143.891 kb on + strand, within CA264_17820 at 4143.961 kb on + strand, within CA264_17820 at 4144.065 kb on + strand, within CA264_17820 at 4144.304 kb on + strand, within CA264_17820 at 4144.353 kb on + strand, within CA264_17820 at 4144.395 kb on + strand, within CA264_17820 at 4144.395 kb on + strand, within CA264_17820
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 4,142,365 + CA264_17815 0.17 -0.3 4,142,366 - CA264_17815 0.17 -0.3 4,142,449 - CA264_17815 0.24 -0.1 4,142,452 + CA264_17815 0.24 -0.0 4,142,452 + CA264_17815 0.24 +0.8 4,142,453 - CA264_17815 0.24 -0.2 4,142,460 + CA264_17815 0.25 -1.7 4,142,472 - CA264_17815 0.26 -0.1 4,142,503 + CA264_17815 0.28 -0.3 4,142,504 - CA264_17815 0.28 -1.1 4,143,074 - CA264_17815 0.77 +0.3 4,143,135 + CA264_17815 0.82 -0.3 4,143,136 - CA264_17815 0.82 -0.2 4,143,240 - -0.2 4,143,275 - +0.2 4,143,348 - -0.3 4,143,348 - -1.2 4,143,362 + -0.1 4,143,468 + -0.6 4,143,481 - +0.5 4,143,760 + CA264_17820 0.32 -0.4 4,143,887 - CA264_17820 0.43 +0.0 4,143,887 - CA264_17820 0.43 -0.4 4,143,891 + CA264_17820 0.43 -2.2 4,143,961 + CA264_17820 0.49 -1.7 4,144,065 + CA264_17820 0.57 +0.0 4,144,304 + CA264_17820 0.76 -1.2 4,144,353 + CA264_17820 0.80 +0.6 4,144,395 + CA264_17820 0.84 -1.6 4,144,395 + CA264_17820 0.84 -0.8
Or see this region's nucleotide sequence