Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17680 and CA264_17685 are separated by 105 nucleotides CA264_17685 and CA264_17690 are separated by 27 nucleotides CA264_17690 and CA264_17695 are separated by 512 nucleotides
CA264_17680: CA264_17680 - CoB--CoM heterodisulfide reductase, at 4,114,313 to 4,115,095
_17680
CA264_17685: CA264_17685 - hypothetical protein, at 4,115,201 to 4,115,683
_17685
CA264_17690: CA264_17690 - hypothetical protein, at 4,115,711 to 4,117,660
_17690
CA264_17695: CA264_17695 - phosphoribosylformylglycinamidine cyclo-ligase, at 4,118,173 to 4,119,342
_17695
Position (kb)
4115
4116
4117
4118 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4114.751 kb on + strand, within CA264_17680 at 4114.752 kb on - strand, within CA264_17680 at 4114.775 kb on + strand, within CA264_17680 at 4114.776 kb on - strand, within CA264_17680 at 4114.837 kb on - strand, within CA264_17680 at 4114.990 kb on + strand, within CA264_17680 at 4115.093 kb on + strand at 4115.094 kb on - strand at 4115.096 kb on + strand at 4115.141 kb on + strand at 4115.176 kb on - strand at 4115.176 kb on - strand at 4115.178 kb on + strand at 4115.179 kb on - strand at 4115.186 kb on + strand at 4115.187 kb on - strand at 4115.187 kb on - strand at 4115.198 kb on - strand at 4115.206 kb on + strand at 4115.434 kb on + strand, within CA264_17685 at 4115.435 kb on - strand, within CA264_17685 at 4115.435 kb on - strand, within CA264_17685 at 4115.473 kb on + strand, within CA264_17685 at 4115.474 kb on - strand, within CA264_17685 at 4115.587 kb on + strand, within CA264_17685 at 4115.587 kb on + strand, within CA264_17685 at 4115.588 kb on - strand, within CA264_17685 at 4115.588 kb on - strand, within CA264_17685 at 4115.592 kb on + strand, within CA264_17685 at 4115.592 kb on + strand, within CA264_17685 at 4115.594 kb on + strand, within CA264_17685 at 4115.594 kb on + strand, within CA264_17685 at 4115.594 kb on + strand, within CA264_17685 at 4115.595 kb on - strand, within CA264_17685 at 4115.595 kb on - strand, within CA264_17685 at 4115.595 kb on - strand, within CA264_17685 at 4115.595 kb on - strand, within CA264_17685 at 4115.595 kb on - strand, within CA264_17685 at 4115.615 kb on - strand, within CA264_17685 at 4115.618 kb on + strand, within CA264_17685 at 4115.698 kb on - strand at 4115.702 kb on + strand at 4115.702 kb on + strand at 4115.702 kb on + strand at 4115.703 kb on - strand at 4115.810 kb on - strand at 4115.853 kb on - strand at 4115.853 kb on - strand at 4115.863 kb on + strand at 4115.864 kb on - strand at 4115.870 kb on + strand at 4115.874 kb on - strand at 4115.918 kb on + strand, within CA264_17690 at 4115.918 kb on + strand, within CA264_17690 at 4115.976 kb on - strand, within CA264_17690 at 4115.977 kb on + strand, within CA264_17690 at 4115.978 kb on - strand, within CA264_17690 at 4115.999 kb on + strand, within CA264_17690 at 4116.017 kb on + strand, within CA264_17690 at 4116.017 kb on + strand, within CA264_17690 at 4116.020 kb on + strand, within CA264_17690 at 4116.026 kb on + strand, within CA264_17690 at 4116.026 kb on + strand, within CA264_17690 at 4116.027 kb on - strand, within CA264_17690 at 4116.027 kb on - strand at 4116.027 kb on - strand, within CA264_17690 at 4116.087 kb on - strand, within CA264_17690 at 4116.240 kb on - strand, within CA264_17690 at 4116.381 kb on - strand, within CA264_17690 at 4116.422 kb on - strand, within CA264_17690 at 4116.495 kb on + strand, within CA264_17690 at 4116.615 kb on - strand, within CA264_17690 at 4116.659 kb on + strand, within CA264_17690 at 4116.659 kb on + strand, within CA264_17690 at 4116.722 kb on - strand, within CA264_17690 at 4116.774 kb on - strand, within CA264_17690 at 4116.774 kb on - strand, within CA264_17690 at 4116.908 kb on + strand, within CA264_17690 at 4116.908 kb on + strand, within CA264_17690 at 4116.909 kb on - strand, within CA264_17690 at 4116.991 kb on + strand, within CA264_17690 at 4116.992 kb on - strand, within CA264_17690 at 4117.017 kb on - strand, within CA264_17690 at 4117.105 kb on + strand, within CA264_17690 at 4117.109 kb on - strand, within CA264_17690 at 4117.266 kb on + strand, within CA264_17690 at 4117.469 kb on + strand at 4117.648 kb on + strand at 4117.649 kb on - strand at 4117.650 kb on + strand at 4117.651 kb on - strand at 4117.658 kb on + strand at 4117.668 kb on - strand at 4117.692 kb on + strand at 4117.696 kb on + strand at 4117.697 kb on - strand at 4117.697 kb on - strand at 4117.698 kb on + strand at 4117.699 kb on - strand at 4117.744 kb on - strand at 4117.744 kb on - strand at 4117.944 kb on + strand at 4117.944 kb on + strand at 4117.944 kb on + strand at 4117.945 kb on - strand at 4118.061 kb on - strand at 4118.061 kb on - strand at 4118.107 kb on - strand at 4118.172 kb on + strand at 4118.255 kb on + strand at 4118.256 kb on - strand at 4118.312 kb on - strand, within CA264_17695 at 4118.323 kb on - strand, within CA264_17695 at 4118.363 kb on - strand, within CA264_17695 at 4118.369 kb on - strand, within CA264_17695 at 4118.467 kb on - strand, within CA264_17695 at 4118.590 kb on + strand, within CA264_17695
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 4,114,751 + CA264_17680 0.56 -0.9 4,114,752 - CA264_17680 0.56 +0.5 4,114,775 + CA264_17680 0.59 +2.2 4,114,776 - CA264_17680 0.59 +0.3 4,114,837 - CA264_17680 0.67 -0.3 4,114,990 + CA264_17680 0.86 +0.1 4,115,093 + -0.4 4,115,094 - -0.1 4,115,096 + +1.0 4,115,141 + -1.9 4,115,176 - -0.7 4,115,176 - -1.0 4,115,178 + +0.7 4,115,179 - -0.2 4,115,186 + +0.2 4,115,187 - -0.9 4,115,187 - -0.4 4,115,198 - +0.0 4,115,206 + +0.4 4,115,434 + CA264_17685 0.48 -0.8 4,115,435 - CA264_17685 0.48 -1.3 4,115,435 - CA264_17685 0.48 -0.5 4,115,473 + CA264_17685 0.56 -0.5 4,115,474 - CA264_17685 0.57 -0.3 4,115,587 + CA264_17685 0.80 -1.3 4,115,587 + CA264_17685 0.80 -0.5 4,115,588 - CA264_17685 0.80 -0.7 4,115,588 - CA264_17685 0.80 -0.0 4,115,592 + CA264_17685 0.81 +0.2 4,115,592 + CA264_17685 0.81 -1.7 4,115,594 + CA264_17685 0.81 -0.4 4,115,594 + CA264_17685 0.81 -1.1 4,115,594 + CA264_17685 0.81 +0.2 4,115,595 - CA264_17685 0.82 +0.3 4,115,595 - CA264_17685 0.82 -3.1 4,115,595 - CA264_17685 0.82 -0.5 4,115,595 - CA264_17685 0.82 -1.0 4,115,595 - CA264_17685 0.82 -0.5 4,115,615 - CA264_17685 0.86 -0.7 4,115,618 + CA264_17685 0.86 -2.1 4,115,698 - +0.0 4,115,702 + -0.0 4,115,702 + -0.3 4,115,702 + -0.1 4,115,703 - -0.0 4,115,810 - +0.1 4,115,853 - +0.0 4,115,853 - -1.2 4,115,863 + +0.4 4,115,864 - -0.1 4,115,870 + +1.6 4,115,874 - +1.1 4,115,918 + CA264_17690 0.11 -1.3 4,115,918 + CA264_17690 0.11 +0.5 4,115,976 - CA264_17690 0.14 -0.0 4,115,977 + CA264_17690 0.14 +0.4 4,115,978 - CA264_17690 0.14 +0.1 4,115,999 + CA264_17690 0.15 -0.7 4,116,017 + CA264_17690 0.16 -0.3 4,116,017 + CA264_17690 0.16 -0.3 4,116,020 + CA264_17690 0.16 +0.2 4,116,026 + CA264_17690 0.16 +1.2 4,116,026 + CA264_17690 0.16 -0.7 4,116,027 - CA264_17690 0.16 +1.2 4,116,027 - +1.4 4,116,027 - CA264_17690 0.16 -0.2 4,116,087 - CA264_17690 0.19 +0.1 4,116,240 - CA264_17690 0.27 -0.6 4,116,381 - CA264_17690 0.34 -1.0 4,116,422 - CA264_17690 0.36 -0.5 4,116,495 + CA264_17690 0.40 -0.1 4,116,615 - CA264_17690 0.46 -0.3 4,116,659 + CA264_17690 0.49 -0.2 4,116,659 + CA264_17690 0.49 +0.2 4,116,722 - CA264_17690 0.52 +0.3 4,116,774 - CA264_17690 0.55 -0.2 4,116,774 - CA264_17690 0.55 -0.2 4,116,908 + CA264_17690 0.61 -0.2 4,116,908 + CA264_17690 0.61 -0.1 4,116,909 - CA264_17690 0.61 -0.0 4,116,991 + CA264_17690 0.66 +0.0 4,116,992 - CA264_17690 0.66 -1.1 4,117,017 - CA264_17690 0.67 -0.2 4,117,105 + CA264_17690 0.71 +0.5 4,117,109 - CA264_17690 0.72 -1.3 4,117,266 + CA264_17690 0.80 -0.7 4,117,469 + -0.0 4,117,648 + -0.8 4,117,649 - +1.1 4,117,650 + +1.4 4,117,651 - -0.4 4,117,658 + -0.1 4,117,668 - -0.3 4,117,692 + +0.2 4,117,696 + +0.1 4,117,697 - -0.6 4,117,697 - +0.3 4,117,698 + -0.2 4,117,699 - -0.1 4,117,744 - -0.0 4,117,744 - +1.5 4,117,944 + -0.1 4,117,944 + +0.3 4,117,944 + -0.8 4,117,945 - +0.2 4,118,061 - -0.1 4,118,061 - -0.2 4,118,107 - -0.0 4,118,172 + -0.4 4,118,255 + +1.3 4,118,256 - +0.0 4,118,312 - CA264_17695 0.12 +0.2 4,118,323 - CA264_17695 0.13 -0.5 4,118,363 - CA264_17695 0.16 +0.3 4,118,369 - CA264_17695 0.17 -0.5 4,118,467 - CA264_17695 0.25 -0.5 4,118,590 + CA264_17695 0.36 -0.9
Or see this region's nucleotide sequence