Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17615 and CA264_17620 are separated by 95 nucleotides CA264_17620 and CA264_17625 are separated by 9 nucleotides CA264_17625 and CA264_17630 overlap by 17 nucleotides CA264_17630 and CA264_17635 are separated by 9 nucleotides
CA264_17615: CA264_17615 - pantoate--beta-alanine ligase, at 4,103,298 to 4,104,152
_17615
CA264_17620: CA264_17620 - aspartate 1-decarboxylase, at 4,104,248 to 4,104,595
_17620
CA264_17625: CA264_17625 - TIGR00374 family protein, at 4,104,605 to 4,105,651
_17625
CA264_17630: CA264_17630 - D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase, at 4,105,635 to 4,106,132
_17630
CA264_17635: CA264_17635 - hypothetical protein, at 4,106,142 to 4,106,822
_17635
Position (kb)
4104
4105
4106 Strain fitness (log2 ratio)
-2
-1
0
1 at 4104.150 kb on + strand at 4104.150 kb on + strand at 4104.178 kb on - strand at 4104.199 kb on + strand at 4104.199 kb on + strand at 4104.199 kb on + strand at 4104.199 kb on + strand at 4104.199 kb on + strand at 4104.199 kb on + strand at 4104.200 kb on - strand at 4104.200 kb on - strand at 4104.214 kb on + strand at 4104.214 kb on + strand at 4104.218 kb on + strand at 4104.232 kb on - strand at 4104.243 kb on - strand at 4106.119 kb on + strand at 4106.135 kb on + strand at 4106.136 kb on - strand at 4106.154 kb on + strand at 4106.155 kb on - strand at 4106.155 kb on - strand at 4106.159 kb on + strand at 4106.186 kb on + strand at 4106.226 kb on + strand, within CA264_17635 at 4106.308 kb on + strand, within CA264_17635 at 4106.308 kb on + strand, within CA264_17635 at 4106.308 kb on + strand, within CA264_17635 at 4106.309 kb on - strand, within CA264_17635 at 4106.314 kb on + strand, within CA264_17635 at 4106.314 kb on + strand, within CA264_17635 at 4106.315 kb on - strand, within CA264_17635 at 4106.346 kb on + strand, within CA264_17635 at 4106.383 kb on - strand, within CA264_17635 at 4106.388 kb on + strand, within CA264_17635 at 4106.463 kb on + strand, within CA264_17635 at 4106.463 kb on + strand, within CA264_17635 at 4106.557 kb on + strand, within CA264_17635 at 4106.606 kb on + strand, within CA264_17635
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 4,104,150 + -0.6 4,104,150 + -0.8 4,104,178 - -0.4 4,104,199 + +0.2 4,104,199 + +0.7 4,104,199 + -0.6 4,104,199 + +0.1 4,104,199 + +0.4 4,104,199 + -0.3 4,104,200 - -0.7 4,104,200 - -0.1 4,104,214 + +0.3 4,104,214 + -0.1 4,104,218 + -0.8 4,104,232 - -0.9 4,104,243 - -1.0 4,106,119 + -0.5 4,106,135 + -1.9 4,106,136 - -1.3 4,106,154 + -1.0 4,106,155 - -0.0 4,106,155 - -2.2 4,106,159 + -0.8 4,106,186 + -0.3 4,106,226 + CA264_17635 0.12 -0.8 4,106,308 + CA264_17635 0.24 -1.9 4,106,308 + CA264_17635 0.24 -1.4 4,106,308 + CA264_17635 0.24 -1.2 4,106,309 - CA264_17635 0.25 -0.1 4,106,314 + CA264_17635 0.25 -0.7 4,106,314 + CA264_17635 0.25 -0.6 4,106,315 - CA264_17635 0.25 +0.8 4,106,346 + CA264_17635 0.30 -0.4 4,106,383 - CA264_17635 0.35 +0.3 4,106,388 + CA264_17635 0.36 -0.1 4,106,463 + CA264_17635 0.47 -0.8 4,106,463 + CA264_17635 0.47 -0.7 4,106,557 + CA264_17635 0.61 +0.4 4,106,606 + CA264_17635 0.68 +0.2
Or see this region's nucleotide sequence